RNA–Protein interactions for RNA: ENST00000558649.5

RABGGTA-206, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-206ENST00000558649 PSMB6P28072 239 aa12.25□□□□□ -0.45
RABGGTA-206ENST00000558649 MECP2P51608 486 aaKnown RBP12.25□□□□□ -0.45
RABGGTA-206ENST00000558649 BEAN1Q3B7T3 259 aa12.25□□□□□ -0.45
RABGGTA-206ENST00000558649 OR1L8Q8NGR8 309 aa12.25□□□□□ -0.45
RABGGTA-206ENST00000558649 SCGB3A2Q96PL1 93 aa12.25□□□□□ -0.45
RABGGTA-206ENST00000558649 IGLC7A0M8Q6 106 aa12.24□□□□□ -0.45
RABGGTA-206ENST00000558649 FAM223BA6NKX1 122 aa12.24□□□□□ -0.45
RABGGTA-206ENST00000558649 ATG12O94817 140 aa12.24□□□□□ -0.45
RABGGTA-206ENST00000558649 DHFRP00374 187 aa12.24□□□□□ -0.45
RABGGTA-206ENST00000558649 IGKV1-5P01602 117 aa12.24□□□□□ -0.45
RABGGTA-206ENST00000558649 PRB2P02812 416 aaPredicted RBP12.24□□□□□ -0.45
RABGGTA-206ENST00000558649 HSPB1P04792 205 aaKnown RBP12.24□□□□□ -0.45
RABGGTA-206ENST00000558649 UCP1P25874 307 aa12.24□□□□□ -0.45
RABGGTA-206ENST00000558649 ATP5G2Q06055 141 aa12.24□□□□□ -0.45
RABGGTA-206ENST00000558649 EXOSC2Q13868 293 aaKnown RBP12.24□□□□□ -0.45
RABGGTA-206ENST00000558649 TMED4Q7Z7H5 227 aa12.24□□□□□ -0.45
RABGGTA-206ENST00000558649 FAM223AQ8IWN6 122 aa12.24□□□□□ -0.45
RABGGTA-206ENST00000558649 SGPP2Q8IWX5 399 aa12.24□□□□□ -0.45
RABGGTA-206ENST00000558649 TMEM230Q96A57 120 aa12.24□□□□□ -0.45
RABGGTA-206ENST00000558649 USMG5Q96IX5 58 aa12.24□□□□□ -0.45
RABGGTA-206ENST00000558649 SDHCQ99643 169 aaPredicted RBP12.24□□□□□ -0.45
RABGGTA-206ENST00000558649 TMEM222Q9H0R3 208 aa12.24□□□□□ -0.45
RABGGTA-206ENST00000558649 PRR13Q9NZ81 148 aa12.24□□□□□ -0.45
RABGGTA-206ENST00000558649 S4R3C0 116 aa12.24□□□□□ -0.45
RABGGTA-206ENST00000558649 B3GALNT1O75752 331 aa12.23□□□□□ -0.45
RABGGTA-206ENST00000558649 BRI3O95415 125 aa12.23□□□□□ -0.45
RABGGTA-206ENST00000558649 DUS4LO95620 317 aaKnown RBP12.23□□□□□ -0.45
RABGGTA-206ENST00000558649 FGF2P09038 288 aa12.23□□□□□ -0.45
RABGGTA-206ENST00000558649 OR13C7P0DN81 318 aa12.23□□□□□ -0.45
RABGGTA-206ENST00000558649 CTRB1P17538 263 aa12.23□□□□□ -0.45
RABGGTA-206ENST00000558649 HOXD3P31249 432 aaPredicted RBP12.23□□□□□ -0.45
RABGGTA-206ENST00000558649 C15orf32Q32M92 178 aa12.23□□□□□ -0.45
RABGGTA-206ENST00000558649 CTRB2Q6GPI1 263 aa12.23□□□□□ -0.45
RABGGTA-206ENST00000558649 NECAP1Q8NC96 275 aa12.23□□□□□ -0.45
RABGGTA-206ENST00000558649 DCUN1D4Q92564 292 aa12.23□□□□□ -0.45
RABGGTA-206ENST00000558649 RRNAD1Q96FB5 475 aaKnown RBP12.23□□□□□ -0.45
RABGGTA-206ENST00000558649 MCRIP2Q9BUT9 160 aaKnown RBP12.23□□□□□ -0.45
RABGGTA-206ENST00000558649 NDUFA4L2Q9NRX3 87 aa12.23□□□□□ -0.45
RABGGTA-206ENST00000558649 TMEM14BQ9NUH8 114 aa12.23□□□□□ -0.45
RABGGTA-206ENST00000558649 FKBP11Q9NYL4 201 aa12.23□□□□□ -0.45
RABGGTA-206ENST00000558649 FBXL7Q9UJT9 491 aa12.23□□□□□ -0.45
RABGGTA-206ENST00000558649 TRBV9A0A0B4J1U6 114 aa12.22□□□□□ -0.45
RABGGTA-206ENST00000558649 SEC14L6B5MCN3 397 aa12.22□□□□□ -0.45
RABGGTA-206ENST00000558649 TRBV12-3P01733 135 aa12.22□□□□□ -0.45
RABGGTA-206ENST00000558649 IGHV3-23P01764 117 aa12.22□□□□□ -0.45
RABGGTA-206ENST00000558649 CRYGCP07315 174 aa12.22□□□□□ -0.45
RABGGTA-206ENST00000558649 IL7P13232 177 aa12.22□□□□□ -0.45
RABGGTA-206ENST00000558649 CCR6P51684 374 aa12.22□□□□□ -0.45
RABGGTA-206ENST00000558649 DHODHQ02127 395 aa12.22□□□□□ -0.45
RABGGTA-206ENST00000558649 WT1-ASQ06250 92 aa12.22□□□□□ -0.45
RABGGTA-206ENST00000558649 SPINK9Q5DT21 86 aa12.22□□□□□ -0.45
RABGGTA-206ENST00000558649 TMEM268Q5VZI3 342 aa12.22□□□□□ -0.45
RABGGTA-206ENST00000558649 THOC7Q6I9Y2 204 aaKnown RBP12.22□□□□□ -0.45
RABGGTA-206ENST00000558649 CADM3Q8N126 398 aa12.22□□□□□ -0.45
RABGGTA-206ENST00000558649 OR5B3Q8NH48 314 aa12.22□□□□□ -0.45
RABGGTA-206ENST00000558649 LHFPL5Q8TAF8 219 aa12.22□□□□□ -0.45
RABGGTA-206ENST00000558649 GLYATL2Q8WU03 294 aa12.22□□□□□ -0.45
RABGGTA-206ENST00000558649 DEDD2Q8WXF8 326 aa12.22□□□□□ -0.45
RABGGTA-206ENST00000558649 DLX4Q92988 240 aaPredicted RBP12.22□□□□□ -0.45
RABGGTA-206ENST00000558649 LSM10Q969L4 123 aaKnown RBP12.22□□□□□ -0.45
RABGGTA-206ENST00000558649 RANGRFQ9HD47 186 aaPredicted RBP12.22□□□□□ -0.45
RABGGTA-206ENST00000558649 A0A0G2JRQ6 117 aa12.21□□□□□ -0.45
RABGGTA-206ENST00000558649 OVOL1O14753 267 aa12.21□□□□□ -0.45
RABGGTA-206ENST00000558649 NDUFB8O95169 186 aa12.21□□□□□ -0.45
RABGGTA-206ENST00000558649 ZNF343Q6P1L6 599 aa12.21□□□□□ -0.45
RABGGTA-206ENST00000558649 SELENOHQ8IZQ5 122 aaKnown RBP12.21□□□□□ -0.45
RABGGTA-206ENST00000558649 RBPMSQ93062 196 aaKnown RBP12.21□□□□□ -0.45
RABGGTA-206ENST00000558649 TMEM56Q96MV1 263 aa12.21□□□□□ -0.45
RABGGTA-206ENST00000558649 FANCD2OSQ96PS1 177 aa12.21□□□□□ -0.45
RABGGTA-206ENST00000558649 SRSF8Q9BRL6 282 aaKnown RBP12.21□□□□□ -0.45
RABGGTA-206ENST00000558649 GPR61Q9BZJ8 451 aa12.21□□□□□ -0.45
RABGGTA-206ENST00000558649 PEF1Q9UBV8 284 aaKnown RBP12.21□□□□□ -0.45
RABGGTA-206ENST00000558649 KCNIP3Q9Y2W7 256 aa12.21□□□□□ -0.45
RABGGTA-206ENST00000558649 CDS2O95674 445 aa12.2□□□□□ -0.46
RABGGTA-206ENST00000558649 HIST1H1BP16401 226 aaKnown RBP12.2□□□□□ -0.46
RABGGTA-206ENST00000558649 RBMS2Q15434 407 aaKnown RBP12.2□□□□□ -0.46
RABGGTA-206ENST00000558649 KPRPQ5T749 579 aaPredicted RBP12.2□□□□□ -0.46
RABGGTA-206ENST00000558649 HSD17B13Q7Z5P4 300 aaPredicted RBP12.2□□□□□ -0.46
RABGGTA-206ENST00000558649 SLC35G3Q8N808 338 aa12.2□□□□□ -0.46
RABGGTA-206ENST00000558649 PDCD10Q9BUL8 212 aa12.2□□□□□ -0.46
RABGGTA-206ENST00000558649 MEGF8Q7Z7M0 2845 aa12.19□□□□□ -0.46
RABGGTA-206ENST00000558649 IGLV11-55A0A075B6I3 123 aa12.19□□□□□ -0.46
RABGGTA-206ENST00000558649 A0A0B4J293 547 aa12.19□□□□□ -0.46
RABGGTA-206ENST00000558649 NAP1L6A6NFF2 107 aa12.19□□□□□ -0.46
RABGGTA-206ENST00000558649 CENPXA8MT69 81 aa12.19□□□□□ -0.46
RABGGTA-206ENST00000558649 PPP5D1E7EU14 171 aa12.19□□□□□ -0.46
RABGGTA-206ENST00000558649 ST8SIA3O43173 380 aa12.19□□□□□ -0.46
RABGGTA-206ENST00000558649 IFNA17P01571 189 aa12.19□□□□□ -0.46
RABGGTA-206ENST00000558649 P0C879 139 aa12.19□□□□□ -0.46
RABGGTA-206ENST00000558649 ANXA3P12429 323 aa12.19□□□□□ -0.46
RABGGTA-206ENST00000558649 ZP3P21754 424 aa12.19□□□□□ -0.46
RABGGTA-206ENST00000558649 VAMP1P23763 118 aa12.19□□□□□ -0.46
RABGGTA-206ENST00000558649 SUPT4H1P63272 117 aaKnown RBP12.19□□□□□ -0.46
RABGGTA-206ENST00000558649 PRCDQ00LT1 54 aa12.19□□□□□ -0.46
RABGGTA-206ENST00000558649 TMEM187Q14656 261 aa12.19□□□□□ -0.46
RABGGTA-206ENST00000558649 RPEL1Q2QD12 228 aa12.19□□□□□ -0.46
RABGGTA-206ENST00000558649 C9orf66Q5T8R8 295 aa12.19□□□□□ -0.46
RABGGTA-206ENST00000558649 SLC25A24Q6NUK1 477 aa12.19□□□□□ -0.46
RABGGTA-206ENST00000558649 GALNT14Q96FL9 552 aa12.19□□□□□ -0.46
RABGGTA-206ENST00000558649 SLC25A21Q9BQT8 299 aaPredicted RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms