RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 SRRQ9GZT4 340 aa8.25□□□□□ -1.09
LINC00239-201ENST00000556973 C5orf66Q9H5L9 145 aa8.25□□□□□ -1.09
LINC00239-201ENST00000556973 AKIP1Q9NQ31 210 aa8.25□□□□□ -1.09
LINC00239-201ENST00000556973 NDUFA4L2Q9NRX3 87 aa8.25□□□□□ -1.09
LINC00239-201ENST00000556973 PEF1Q9UBV8 284 aaKnown RBP8.25□□□□□ -1.09
LINC00239-201ENST00000556973 ZMAT5Q9UDW3 170 aaKnown RBP8.25□□□□□ -1.09
LINC00239-201ENST00000556973 KLK9Q9UKQ9 250 aa8.25□□□□□ -1.09
LINC00239-201ENST00000556973 NSG2Q9Y328 171 aa8.25□□□□□ -1.09
LINC00239-201ENST00000556973 IGHV4OR15-8A0A075B7B6 117 aa8.24□□□□□ -1.09
LINC00239-201ENST00000556973 A0A087WW49 117 aa8.24□□□□□ -1.09
LINC00239-201ENST00000556973 CYB5BO43169 146 aa8.24□□□□□ -1.09
LINC00239-201ENST00000556973 CDS2O95674 445 aa8.24□□□□□ -1.09
LINC00239-201ENST00000556973 DEFA4P12838 97 aa8.24□□□□□ -1.09
LINC00239-201ENST00000556973 ZP3P21754 424 aa8.24□□□□□ -1.09
LINC00239-201ENST00000556973 UCP1P25874 307 aa8.24□□□□□ -1.09
LINC00239-201ENST00000556973 TRIM16LQ309B1 348 aa8.24□□□□□ -1.09
LINC00239-201ENST00000556973 FAM209BQ5JX69 171 aa8.24□□□□□ -1.09
LINC00239-201ENST00000556973 C9orf66Q5T8R8 295 aa8.24□□□□□ -1.09
LINC00239-201ENST00000556973 REC114Q7Z4M0 266 aa8.24□□□□□ -1.09
LINC00239-201ENST00000556973 DCUN1D4Q92564 292 aa8.24□□□□□ -1.09
LINC00239-201ENST00000556973 TMEM56Q96MV1 263 aa8.24□□□□□ -1.09
LINC00239-201ENST00000556973 FANCD2OSQ96PS1 177 aa8.24□□□□□ -1.09
LINC00239-201ENST00000556973 NAA60Q9H7X0 242 aa8.24□□□□□ -1.09
LINC00239-201ENST00000556973 TMEM14BQ9NUH8 114 aa8.24□□□□□ -1.09
LINC00239-201ENST00000556973 FBXL7Q9UJT9 491 aa8.24□□□□□ -1.09
LINC00239-201ENST00000556973 KCNIP3Q9Y2W7 256 aa8.24□□□□□ -1.09
LINC00239-201ENST00000556973 IGLC7A0M8Q6 106 aa8.23□□□□□ -1.09
LINC00239-201ENST00000556973 ANKRD34BA5PLL1 514 aa8.23□□□□□ -1.09
LINC00239-201ENST00000556973 A6NHS1 94 aa8.23□□□□□ -1.09
LINC00239-201ENST00000556973 CRYM-AS1A6NIL9 109 aa8.23□□□□□ -1.09
LINC00239-201ENST00000556973 C15orf61A6NNL5 157 aa8.23□□□□□ -1.09
LINC00239-201ENST00000556973 OVOL1O14753 267 aa8.23□□□□□ -1.09
LINC00239-201ENST00000556973 WIPF1O43516 503 aa8.23□□□□□ -1.09
LINC00239-201ENST00000556973 RBMXL2O75526 392 aaKnown RBP8.23□□□□□ -1.09
LINC00239-201ENST00000556973 OR2J3O76001 311 aa8.23□□□□□ -1.09
LINC00239-201ENST00000556973 IGKV1-5P01602 117 aa8.23□□□□□ -1.09
LINC00239-201ENST00000556973 REG1AP05451 166 aa8.23□□□□□ -1.09
LINC00239-201ENST00000556973 INPP1P49441 399 aa8.23□□□□□ -1.09
LINC00239-201ENST00000556973 SLURP1P55000 103 aa8.23□□□□□ -1.09
LINC00239-201ENST00000556973 EGFEM1PQ0D2K5 195 aa8.23□□□□□ -1.09
LINC00239-201ENST00000556973 ZNF57Q68EA5 555 aaPredicted RBP8.23□□□□□ -1.09
LINC00239-201ENST00000556973 SGPP2Q8IWX5 399 aa8.23□□□□□ -1.09
LINC00239-201ENST00000556973 OR10W1Q8NGF6 305 aa8.23□□□□□ -1.09
LINC00239-201ENST00000556973 GLYATL2Q8WU03 294 aa8.23□□□□□ -1.09
LINC00239-201ENST00000556973 DLX4Q92988 240 aaPredicted RBP8.23□□□□□ -1.09
LINC00239-201ENST00000556973 LSM10Q969L4 123 aaKnown RBP8.23□□□□□ -1.09
LINC00239-201ENST00000556973 SLC25A21Q9BQT8 299 aaPredicted RBP8.23□□□□□ -1.09
LINC00239-201ENST00000556973 TMEM222Q9H0R3 208 aa8.23□□□□□ -1.09
LINC00239-201ENST00000556973 THYN1Q9P016 225 aa8.23□□□□□ -1.09
LINC00239-201ENST00000556973 IGLV11-55A0A075B6I3 123 aa8.22□□□□□ -1.09
LINC00239-201ENST00000556973 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.22□□□□□ -1.09
LINC00239-201ENST00000556973 DBX1A6NMT0 343 aa8.22□□□□□ -1.09
LINC00239-201ENST00000556973 SEC14L6B5MCN3 397 aa8.22□□□□□ -1.09
LINC00239-201ENST00000556973 NDUFB8O95169 186 aa8.22□□□□□ -1.09
LINC00239-201ENST00000556973 OR5AC1P0C628 307 aa8.22□□□□□ -1.09
LINC00239-201ENST00000556973 OR13C7P0DN81 318 aa8.22□□□□□ -1.09
LINC00239-201ENST00000556973 AKR1C4P17516 323 aa8.22□□□□□ -1.09
LINC00239-201ENST00000556973 HOXD3P31249 432 aaPredicted RBP8.22□□□□□ -1.09
LINC00239-201ENST00000556973 INSL3P51460 131 aa8.22□□□□□ -1.09
LINC00239-201ENST00000556973 AKR1C2P52895 323 aa8.22□□□□□ -1.09
LINC00239-201ENST00000556973 HSPE1P61604 102 aaKnown RBP8.22□□□□□ -1.09
LINC00239-201ENST00000556973 DEFA5Q01523 94 aa8.22□□□□□ -1.09
LINC00239-201ENST00000556973 WT1-ASQ06250 92 aa8.22□□□□□ -1.09
LINC00239-201ENST00000556973 KLF5Q13887 457 aaPredicted RBP8.22□□□□□ -1.09
LINC00239-201ENST00000556973 BAK1Q16611 211 aa8.22□□□□□ -1.09
LINC00239-201ENST00000556973 TATDN3Q17R31 274 aa8.22□□□□□ -1.09
LINC00239-201ENST00000556973 C15orf32Q32M92 178 aa8.22□□□□□ -1.09
LINC00239-201ENST00000556973 PDLIM3Q53GG5 364 aaPredicted RBP8.22□□□□□ -1.09
LINC00239-201ENST00000556973 TRIQKQ629K1 86 aa8.22□□□□□ -1.09
LINC00239-201ENST00000556973 LINC00299Q6ZSB3 139 aa8.22□□□□□ -1.09
LINC00239-201ENST00000556973 ZNF429Q86V71 674 aa8.22□□□□□ -1.09
LINC00239-201ENST00000556973 OR1L6Q8NGR2 347 aa8.22□□□□□ -1.09
LINC00239-201ENST00000556973 RRNAD1Q96FB5 475 aaKnown RBP8.22□□□□□ -1.09
LINC00239-201ENST00000556973 GALNT14Q96FL9 552 aa8.22□□□□□ -1.09
LINC00239-201ENST00000556973 CXorf58Q96LI9 332 aa8.22□□□□□ -1.09
LINC00239-201ENST00000556973 HINT2Q9BX68 163 aa8.22□□□□□ -1.09
LINC00239-201ENST00000556973 MGAM2Q2M2H8 2515 aa8.21□□□□□ -1.1
LINC00239-201ENST00000556973 TRBV7-1A0A0A6YYK4 115 aa8.21□□□□□ -1.1
LINC00239-201ENST00000556973 NAP1L6A6NFF2 107 aa8.21□□□□□ -1.1
LINC00239-201ENST00000556973 CENPXA8MT69 81 aa8.21□□□□□ -1.1
LINC00239-201ENST00000556973 P0C879 139 aa8.21□□□□□ -1.1
LINC00239-201ENST00000556973 ANXA3P12429 323 aa8.21□□□□□ -1.1
LINC00239-201ENST00000556973 MECP2P51608 486 aaKnown RBP8.21□□□□□ -1.1
LINC00239-201ENST00000556973 PRCDQ00LT1 54 aa8.21□□□□□ -1.1
LINC00239-201ENST00000556973 EXOSC2Q13868 293 aaKnown RBP8.21□□□□□ -1.1
LINC00239-201ENST00000556973 RPEL1Q2QD12 228 aa8.21□□□□□ -1.1
LINC00239-201ENST00000556973 ACSM6Q6P461 480 aa8.21□□□□□ -1.1
LINC00239-201ENST00000556973 C19orf35Q6ZS72 473 aa8.21□□□□□ -1.1
LINC00239-201ENST00000556973 FAM219AQ8IW50 185 aa8.21□□□□□ -1.1
LINC00239-201ENST00000556973 SELENOHQ8IZQ5 122 aaKnown RBP8.21□□□□□ -1.1
LINC00239-201ENST00000556973 RBPMSQ93062 196 aaKnown RBP8.21□□□□□ -1.1
LINC00239-201ENST00000556973 TMEM230Q96A57 120 aa8.21□□□□□ -1.1
LINC00239-201ENST00000556973 EEF1AKMT3Q96AZ1 226 aa8.21□□□□□ -1.1
LINC00239-201ENST00000556973 SDHCQ99643 169 aaPredicted RBP8.21□□□□□ -1.1
LINC00239-201ENST00000556973 AURKAIP1Q9NWT8 199 aaPredicted RBP8.21□□□□□ -1.1
LINC00239-201ENST00000556973 F11RQ9Y624 299 aaKnown RBP8.21□□□□□ -1.1
LINC00239-201ENST00000556973 TMEM56-RWDD3S4R434 201 aa8.21□□□□□ -1.1
LINC00239-201ENST00000556973 A0A0B4J293 547 aa8.2□□□□□ -1.1
LINC00239-201ENST00000556973 PIGBOS1A0A0B4J2F0 54 aa8.2□□□□□ -1.1
LINC00239-201ENST00000556973 GGCTO75223 188 aaKnown RBP8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms