RNA–Protein interactions for RNA: ENST00000554350.5

ATXN3-226, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-226ENST00000554350 ZDHHC23Q8IYP9 409 aa4.38□□□□□ -1.71
ATXN3-226ENST00000554350 OR2AE1Q8NHA4 323 aa4.38□□□□□ -1.71
ATXN3-226ENST00000554350 RTN4IP1Q8WWV3 396 aaPredicted RBP4.38□□□□□ -1.71
ATXN3-226ENST00000554350 PIGCQ92535 297 aa4.38□□□□□ -1.71
ATXN3-226ENST00000554350 ARL11Q969Q4 196 aa4.38□□□□□ -1.71
ATXN3-226ENST00000554350 ST6GALNAC6Q969X2 333 aa4.38□□□□□ -1.71
ATXN3-226ENST00000554350 OR10C1Q96KK4 312 aa4.38□□□□□ -1.71
ATXN3-226ENST00000554350 TMEM56Q96MV1 263 aa4.38□□□□□ -1.71
ATXN3-226ENST00000554350 LINC00052Q96N35 136 aa4.38□□□□□ -1.71
ATXN3-226ENST00000554350 SPIN2AQ99865 258 aa4.38□□□□□ -1.71
ATXN3-226ENST00000554350 SPIN2BQ9BPZ2 258 aa4.38□□□□□ -1.71
ATXN3-226ENST00000554350 SMDT1Q9H4I9 107 aa4.38□□□□□ -1.71
ATXN3-226ENST00000554350 SEBOXQ9HB31 216 aaPredicted RBP4.38□□□□□ -1.71
ATXN3-226ENST00000554350 Q9N2K0 584 aa4.38□□□□□ -1.71
ATXN3-226ENST00000554350 CARHSP1Q9Y2V2 147 aaKnown RBP4.38□□□□□ -1.71
ATXN3-226ENST00000554350 TMEM56-RWDD3S4R434 201 aa4.38□□□□□ -1.71
ATXN3-226ENST00000554350 KMT2AQ03164 3969 aa4.38□□□□□ -1.71
ATXN3-226ENST00000554350 BORCS7-ASMTA0A0B4J1R7 106 aa4.37□□□□□ -1.71
ATXN3-226ENST00000554350 LOC105371267A0A1B0GV96 52 aa4.37□□□□□ -1.71
ATXN3-226ENST00000554350 NUPR2A6NF83 97 aa4.37□□□□□ -1.71
ATXN3-226ENST00000554350 SH2D7A6NKC9 451 aaPredicted RBP4.37□□□□□ -1.71
ATXN3-226ENST00000554350 ANKRD30BLA7E2S9 258 aa4.37□□□□□ -1.71
ATXN3-226ENST00000554350 CD300LBA8K4G0 201 aa4.37□□□□□ -1.71
ATXN3-226ENST00000554350 TRDCB7Z8K6 153 aa4.37□□□□□ -1.71
ATXN3-226ENST00000554350 K7EPK0 472 aa4.37□□□□□ -1.71
ATXN3-226ENST00000554350 ST8SIA3O43173 380 aa4.37□□□□□ -1.71
ATXN3-226ENST00000554350 MLNRO43193 412 aa4.37□□□□□ -1.71
ATXN3-226ENST00000554350 NDUFB3O43676 98 aa4.37□□□□□ -1.71
ATXN3-226ENST00000554350 PPYP01298 95 aa4.37□□□□□ -1.71
ATXN3-226ENST00000554350 TK1P04183 234 aa4.37□□□□□ -1.71
ATXN3-226ENST00000554350 COX7A1P24310 79 aa4.37□□□□□ -1.71
ATXN3-226ENST00000554350 DUSP1P28562 367 aa4.37□□□□□ -1.71
ATXN3-226ENST00000554350 S100GP29377 79 aa4.37□□□□□ -1.71
ATXN3-226ENST00000554350 RPL12P30050 165 aaKnown RBP4.37□□□□□ -1.71
ATXN3-226ENST00000554350 FCGR2CP31995 323 aa4.37□□□□□ -1.71
ATXN3-226ENST00000554350 HERV-K104P61576 105 aa4.37□□□□□ -1.71
ATXN3-226ENST00000554350 PRDX4Q13162 271 aa4.37□□□□□ -1.71
ATXN3-226ENST00000554350 ZNF273Q14593 569 aa4.37□□□□□ -1.71
ATXN3-226ENST00000554350 HMGN3Q15651 99 aa4.37□□□□□ -1.71
ATXN3-226ENST00000554350 MSMO1Q15800 293 aa4.37□□□□□ -1.71
ATXN3-226ENST00000554350 HAGHQ16775 308 aa4.37□□□□□ -1.71
ATXN3-226ENST00000554350 TMEM268Q5VZI3 342 aa4.37□□□□□ -1.71
ATXN3-226ENST00000554350 LINC00336Q6ZUF6 198 aa4.37□□□□□ -1.71
ATXN3-226ENST00000554350 SLC25A26Q70HW3 274 aa4.37□□□□□ -1.71
ATXN3-226ENST00000554350 MOB1BQ7L9L4 216 aa4.37□□□□□ -1.71
ATXN3-226ENST00000554350 LHFPL4Q7Z7J7 247 aa4.37□□□□□ -1.71
ATXN3-226ENST00000554350 RTN4RL2Q86UN3 420 aa4.37□□□□□ -1.71
ATXN3-226ENST00000554350 GAPTQ8N292 157 aa4.37□□□□□ -1.71
ATXN3-226ENST00000554350 SVBPQ8N300 66 aa4.37□□□□□ -1.71
ATXN3-226ENST00000554350 FAM216BQ8N7L0 139 aa4.37□□□□□ -1.71
ATXN3-226ENST00000554350 LY6G5BQ8NDX9 201 aa4.37□□□□□ -1.71
ATXN3-226ENST00000554350 OR8G5Q8NG78 346 aa4.37□□□□□ -1.71
ATXN3-226ENST00000554350 OR56B2PQ8NGI1 322 aa4.37□□□□□ -1.71
ATXN3-226ENST00000554350 OR4A4PQ8NGN8 299 aa4.37□□□□□ -1.71
ATXN3-226ENST00000554350 GLYATL2Q8WU03 294 aa4.37□□□□□ -1.71
ATXN3-226ENST00000554350 OR5P3Q8WZ94 311 aa4.37□□□□□ -1.71
ATXN3-226ENST00000554350 RRNAD1Q96FB5 475 aaKnown RBP4.37□□□□□ -1.71
ATXN3-226ENST00000554350 AKR1E2Q96JD6 320 aa4.37□□□□□ -1.71
ATXN3-226ENST00000554350 CCL13Q99616 98 aa4.37□□□□□ -1.71
ATXN3-226ENST00000554350 SEC11CQ9BY50 192 aa4.37□□□□□ -1.71
ATXN3-226ENST00000554350 TMEM222Q9H0R3 208 aa4.37□□□□□ -1.71
ATXN3-226ENST00000554350 PARP11Q9NR21 331 aa4.37□□□□□ -1.71
ATXN3-226ENST00000554350 SLC2A9Q9NRM0 540 aa4.37□□□□□ -1.71
ATXN3-226ENST00000554350 FAM212BQ9NTI7 297 aaPredicted RBP4.37□□□□□ -1.71
ATXN3-226ENST00000554350 OR5AC2Q9NZP5 309 aa4.37□□□□□ -1.71
ATXN3-226ENST00000554350 C3orf85A0A1B0GTC6 90 aa4.36□□□□□ -1.71
ATXN3-226ENST00000554350 A0A1B0GW64 132 aa4.36□□□□□ -1.71
ATXN3-226ENST00000554350 A6NLC8 198 aa4.36□□□□□ -1.71
ATXN3-226ENST00000554350 TMEM210A6NLX4 147 aa4.36□□□□□ -1.71
ATXN3-226ENST00000554350 J3QT63 122 aa4.36□□□□□ -1.71
ATXN3-226ENST00000554350 M0R1W7 72 aa4.36□□□□□ -1.71
ATXN3-226ENST00000554350 GPR31O00270 319 aa4.36□□□□□ -1.71
ATXN3-226ENST00000554350 OR7C1O76099 320 aaPredicted RBP4.36□□□□□ -1.71
ATXN3-226ENST00000554350 ATG12O94817 140 aa4.36□□□□□ -1.71
ATXN3-226ENST00000554350 HOXB5P09067 269 aa4.36□□□□□ -1.71
ATXN3-226ENST00000554350 OR5AC1P0C628 307 aa4.36□□□□□ -1.71
ATXN3-226ENST00000554350 PVALBP20472 110 aaPredicted RBP4.36□□□□□ -1.71
ATXN3-226ENST00000554350 VDAC1P21796 283 aa4.36□□□□□ -1.71
ATXN3-226ENST00000554350 UCP1P25874 307 aa4.36□□□□□ -1.71
ATXN3-226ENST00000554350 GNRHRP30968 328 aa4.36□□□□□ -1.71
ATXN3-226ENST00000554350 CD200P41217 278 aa4.36□□□□□ -1.71
ATXN3-226ENST00000554350 CAV2P51636 162 aa4.36□□□□□ -1.71
ATXN3-226ENST00000554350 F2RL1P55085 397 aa4.36□□□□□ -1.71
ATXN3-226ENST00000554350 ERVK11-1P61568 191 aa4.36□□□□□ -1.71
ATXN3-226ENST00000554350 CFHR3Q02985 330 aa4.36□□□□□ -1.71
ATXN3-226ENST00000554350 BAXQ07812 192 aa4.36□□□□□ -1.71
ATXN3-226ENST00000554350 GNMTQ14749 295 aa4.36□□□□□ -1.71
ATXN3-226ENST00000554350 OR8G1Q15617 311 aa4.36□□□□□ -1.71
ATXN3-226ENST00000554350 SSX2Q16385 188 aa4.36□□□□□ -1.71
ATXN3-226ENST00000554350 PIGYQ3MUY2 71 aa4.36□□□□□ -1.71
ATXN3-226ENST00000554350 LRRC10Q5BKY1 277 aa4.36□□□□□ -1.71
ATXN3-226ENST00000554350 HCP5Q6MZN7 132 aa4.36□□□□□ -1.71
ATXN3-226ENST00000554350 BTNL8Q6UX41 500 aa4.36□□□□□ -1.71
ATXN3-226ENST00000554350 CALHM1Q8IU99 346 aa4.36□□□□□ -1.71
ATXN3-226ENST00000554350 CMTM1Q8IZ96 169 aa4.36□□□□□ -1.71
ATXN3-226ENST00000554350 BPIFCQ8NFQ6 507 aa4.36□□□□□ -1.71
ATXN3-226ENST00000554350 OR5D13Q8NGL4 314 aa4.36□□□□□ -1.71
ATXN3-226ENST00000554350 OR4D5Q8NGN0 318 aa4.36□□□□□ -1.71
ATXN3-226ENST00000554350 OR1S2Q8NGQ3 325 aa4.36□□□□□ -1.71
ATXN3-226ENST00000554350 OR8U1Q8NH10 309 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms