RNA–Protein interactions for RNA: ENST00000553427.5

CPSF2-202, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 715 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-202ENST00000553427 TOMM5Q8N4H5 51 aa14.24□□□□□ -0.13
CPSF2-202ENST00000553427 OR5B3Q8NH48 314 aa14.24□□□□□ -0.13
CPSF2-202ENST00000553427 MCUBQ9NWR8 336 aa14.24□□□□□ -0.13
CPSF2-202ENST00000553427 IGHV4OR15-8A0A075B7B6 117 aa14.23□□□□□ -0.13
CPSF2-202ENST00000553427 A0A087WW49 117 aa14.23□□□□□ -0.13
CPSF2-202ENST00000553427 P0C879 139 aa14.23□□□□□ -0.13
CPSF2-202ENST00000553427 EGFEM1PQ0D2K5 195 aa14.23□□□□□ -0.13
CPSF2-202ENST00000553427 FAM209BQ5JX69 171 aa14.23□□□□□ -0.13
CPSF2-202ENST00000553427 H2BFWTQ7Z2G1 175 aa14.23□□□□□ -0.13
CPSF2-202ENST00000553427 REC114Q7Z4M0 266 aa14.23□□□□□ -0.13
CPSF2-202ENST00000553427 NAA60Q9H7X0 242 aa14.23□□□□□ -0.13
CPSF2-202ENST00000553427 RANGRFQ9HD47 186 aaPredicted RBP14.23□□□□□ -0.13
CPSF2-202ENST00000553427 AKIP1Q9NQ31 210 aa14.23□□□□□ -0.13
CPSF2-202ENST00000553427 NDUFA4L2Q9NRX3 87 aa14.23□□□□□ -0.13
CPSF2-202ENST00000553427 OR51B2Q9Y5P1 312 aa14.23□□□□□ -0.13
CPSF2-202ENST00000553427 TEX50A0A1B0GTY4 177 aa14.22□□□□□ -0.13
CPSF2-202ENST00000553427 CRYM-AS1A6NIL9 109 aa14.22□□□□□ -0.13
CPSF2-202ENST00000553427 TRAPPC2P0DI81 140 aa14.22□□□□□ -0.13
CPSF2-202ENST00000553427 TRAPPC2BP0DI82 140 aa14.22□□□□□ -0.13
CPSF2-202ENST00000553427 HIST1H1BP16401 226 aaKnown RBP14.22□□□□□ -0.13
CPSF2-202ENST00000553427 ZP3P21754 424 aa14.22□□□□□ -0.13
CPSF2-202ENST00000553427 FANCD2OSQ96PS1 177 aa14.22□□□□□ -0.13
CPSF2-202ENST00000553427 TMEM222Q9H0R3 208 aa14.22□□□□□ -0.13
CPSF2-202ENST00000553427 IGKV1-5P01602 117 aa14.21□□□□□ -0.13
CPSF2-202ENST00000553427 PRH1P02810 166 aa14.21□□□□□ -0.13
CPSF2-202ENST00000553427 ATP5G2Q06055 141 aa14.21□□□□□ -0.13
CPSF2-202ENST00000553427 C9orf66Q5T8R8 295 aa14.21□□□□□ -0.13
CPSF2-202ENST00000553427 LINC00299Q6ZSB3 139 aa14.21□□□□□ -0.13
CPSF2-202ENST00000553427 DCUN1D4Q92564 292 aa14.21□□□□□ -0.13
CPSF2-202ENST00000553427 LSM10Q969L4 123 aaKnown RBP14.21□□□□□ -0.13
CPSF2-202ENST00000553427 PEF1Q9UBV8 284 aaKnown RBP14.21□□□□□ -0.13
CPSF2-202ENST00000553427 NSG2Q9Y328 171 aa14.21□□□□□ -0.13
CPSF2-202ENST00000553427 IGLV11-55A0A075B6I3 123 aa14.2□□□□□ -0.14
CPSF2-202ENST00000553427 TEX13DA0A0J9YY54 714 aaPredicted RBP14.2□□□□□ -0.14
CPSF2-202ENST00000553427 A6NHS1 94 aa14.2□□□□□ -0.14
CPSF2-202ENST00000553427 OVOL1O14753 267 aa14.2□□□□□ -0.14
CPSF2-202ENST00000553427 OR2J3O76001 311 aa14.2□□□□□ -0.14
CPSF2-202ENST00000553427 CDS2O95674 445 aa14.2□□□□□ -0.14
CPSF2-202ENST00000553427 SLURP1P55000 103 aa14.2□□□□□ -0.14
CPSF2-202ENST00000553427 DEFA5Q01523 94 aa14.2□□□□□ -0.14
CPSF2-202ENST00000553427 DHODHQ02127 395 aa14.2□□□□□ -0.14
CPSF2-202ENST00000553427 EXOSC2Q13868 293 aaKnown RBP14.2□□□□□ -0.14
CPSF2-202ENST00000553427 TRIM16LQ309B1 348 aa14.2□□□□□ -0.14
CPSF2-202ENST00000553427 C15orf32Q32M92 178 aa14.2□□□□□ -0.14
CPSF2-202ENST00000553427 ZNF429Q86V71 674 aa14.2□□□□□ -0.14
CPSF2-202ENST00000553427 OR4A16Q8NH70 328 aa14.2□□□□□ -0.14
CPSF2-202ENST00000553427 GALNT14Q96FL9 552 aa14.2□□□□□ -0.14
CPSF2-202ENST00000553427 ZMAT5Q9UDW3 170 aaKnown RBP14.2□□□□□ -0.14
CPSF2-202ENST00000553427 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.19□□□□□ -0.14
CPSF2-202ENST00000553427 DBX1A6NMT0 343 aa14.19□□□□□ -0.14
CPSF2-202ENST00000553427 SEC14L6B5MCN3 397 aa14.19□□□□□ -0.14
CPSF2-202ENST00000553427 CYB5BO43169 146 aa14.19□□□□□ -0.14
CPSF2-202ENST00000553427 OR5AC1P0C628 307 aa14.19□□□□□ -0.14
CPSF2-202ENST00000553427 HOXD3P31249 432 aaPredicted RBP14.19□□□□□ -0.14
CPSF2-202ENST00000553427 INSL3P51460 131 aa14.19□□□□□ -0.14
CPSF2-202ENST00000553427 AKR1C2P52895 323 aa14.19□□□□□ -0.14
CPSF2-202ENST00000553427 WT1-ASQ06250 92 aa14.19□□□□□ -0.14
CPSF2-202ENST00000553427 SP6Q3SY56 376 aa14.19□□□□□ -0.14
CPSF2-202ENST00000553427 PDLIM3Q53GG5 364 aaPredicted RBP14.19□□□□□ -0.14
CPSF2-202ENST00000553427 C19orf35Q6ZS72 473 aa14.19□□□□□ -0.14
CPSF2-202ENST00000553427 FAM219AQ8IW50 185 aa14.19□□□□□ -0.14
CPSF2-202ENST00000553427 OR10W1Q8NGF6 305 aa14.19□□□□□ -0.14
CPSF2-202ENST00000553427 GLYATL2Q8WU03 294 aa14.19□□□□□ -0.14
CPSF2-202ENST00000553427 DLX4Q92988 240 aaPredicted RBP14.19□□□□□ -0.14
CPSF2-202ENST00000553427 TMEM230Q96A57 120 aa14.19□□□□□ -0.14
CPSF2-202ENST00000553427 TMEM56Q96MV1 263 aa14.19□□□□□ -0.14
CPSF2-202ENST00000553427 SDHCQ99643 169 aaPredicted RBP14.19□□□□□ -0.14
CPSF2-202ENST00000553427 SLC25A21Q9BQT8 299 aaPredicted RBP14.19□□□□□ -0.14
CPSF2-202ENST00000553427 FBXL7Q9UJT9 491 aa14.19□□□□□ -0.14
CPSF2-202ENST00000553427 REG1AP05451 166 aa14.18□□□□□ -0.14
CPSF2-202ENST00000553427 OR13C7P0DN81 318 aa14.18□□□□□ -0.14
CPSF2-202ENST00000553427 DEFA4P12838 97 aa14.18□□□□□ -0.14
CPSF2-202ENST00000553427 TRIQKQ629K1 86 aa14.18□□□□□ -0.14
CPSF2-202ENST00000553427 SGPP2Q8IWX5 399 aa14.18□□□□□ -0.14
CPSF2-202ENST00000553427 RBPMSQ93062 196 aaKnown RBP14.18□□□□□ -0.14
CPSF2-202ENST00000553427 IL22RA2Q969J5 263 aa14.18□□□□□ -0.14
CPSF2-202ENST00000553427 TMEM56-RWDD3S4R434 201 aa14.18□□□□□ -0.14
CPSF2-202ENST00000553427 ANKRD34BA5PLL1 514 aa14.17□□□□□ -0.14
CPSF2-202ENST00000553427 TRBV12-3P01733 135 aa14.17□□□□□ -0.14
CPSF2-202ENST00000553427 HSPE1P61604 102 aaKnown RBP14.17□□□□□ -0.14
CPSF2-202ENST00000553427 PRCDQ00LT1 54 aa14.17□□□□□ -0.14
CPSF2-202ENST00000553427 KLF5Q13887 457 aaPredicted RBP14.17□□□□□ -0.14
CPSF2-202ENST00000553427 BAK1Q16611 211 aa14.17□□□□□ -0.14
CPSF2-202ENST00000553427 AARDQ4LEZ3 155 aa14.17□□□□□ -0.14
CPSF2-202ENST00000553427 ZNF57Q68EA5 555 aaPredicted RBP14.17□□□□□ -0.14
CPSF2-202ENST00000553427 OR1L6Q8NGR2 347 aa14.17□□□□□ -0.14
CPSF2-202ENST00000553427 RRNAD1Q96FB5 475 aaKnown RBP14.17□□□□□ -0.14
CPSF2-202ENST00000553427 AURKAIP1Q9NWT8 199 aaPredicted RBP14.17□□□□□ -0.14
CPSF2-202ENST00000553427 THYN1Q9P016 225 aa14.17□□□□□ -0.14
CPSF2-202ENST00000553427 KCNIP3Q9Y2W7 256 aa14.17□□□□□ -0.14
CPSF2-202ENST00000553427 DMRT1Q9Y5R6 373 aa14.17□□□□□ -0.14
CPSF2-202ENST00000553427 F11RQ9Y624 299 aaKnown RBP14.17□□□□□ -0.14
CPSF2-202ENST00000553427 A0A0B4J293 547 aa14.16□□□□□ -0.14
CPSF2-202ENST00000553427 NAP1L6A6NFF2 107 aa14.16□□□□□ -0.14
CPSF2-202ENST00000553427 INS-IGF2F8WCM5 200 aa14.16□□□□□ -0.14
CPSF2-202ENST00000553427 NDUFB8O95169 186 aa14.16□□□□□ -0.14
CPSF2-202ENST00000553427 KRTAP10-11P60412 298 aa14.16□□□□□ -0.14
CPSF2-202ENST00000553427 ACSM6Q6P461 480 aa14.16□□□□□ -0.14
CPSF2-202ENST00000553427 ZNF114Q8NC26 417 aa14.16□□□□□ -0.14
CPSF2-202ENST00000553427 LHFPL5Q8TAF8 219 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms