RNA–Protein interactions for RNA: ENST00000549995.1

PFDN5-208, Transcript of prefoldin subunit 5, humanhuman

TSL 3

Gene PFDN5, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-208ENST00000549995 OR1L8Q8NGR8 309 aa9.22□□□□□ -0.93
PFDN5-208ENST00000549995 RBPMSQ93062 196 aaKnown RBP9.22□□□□□ -0.93
PFDN5-208ENST00000549995 LSM10Q969L4 123 aaKnown RBP9.22□□□□□ -0.93
PFDN5-208ENST00000549995 USMG5Q96IX5 58 aa9.22□□□□□ -0.93
PFDN5-208ENST00000549995 PHB2Q99623 299 aa9.22□□□□□ -0.93
PFDN5-208ENST00000549995 WDR12Q9GZL7 423 aaKnown RBP9.22□□□□□ -0.93
PFDN5-208ENST00000549995 COMMD5Q9GZQ3 224 aa9.22□□□□□ -0.93
PFDN5-208ENST00000549995 IGLV11-55A0A075B6I3 123 aa9.21□□□□□ -0.94
PFDN5-208ENST00000549995 PIGBOS1A0A0B4J2F0 54 aa9.21□□□□□ -0.94
PFDN5-208ENST00000549995 A0A0G2JLM5 398 aa9.21□□□□□ -0.94
PFDN5-208ENST00000549995 A0A0G2JRQ6 117 aa9.21□□□□□ -0.94
PFDN5-208ENST00000549995 DUXBA0A1W2PPF3 345 aa9.21□□□□□ -0.94
PFDN5-208ENST00000549995 HMX3A6NHT5 357 aa9.21□□□□□ -0.94
PFDN5-208ENST00000549995 TPPP2P59282 170 aa9.21□□□□□ -0.94
PFDN5-208ENST00000549995 PRCDQ00LT1 54 aa9.21□□□□□ -0.94
PFDN5-208ENST00000549995 WT1-ASQ06250 92 aa9.21□□□□□ -0.94
PFDN5-208ENST00000549995 SP6Q3SY56 376 aa9.21□□□□□ -0.94
PFDN5-208ENST00000549995 KHDC1LQ5JSQ8 128 aa9.21□□□□□ -0.94
PFDN5-208ENST00000549995 KPRPQ5T749 579 aaPredicted RBP9.21□□□□□ -0.94
PFDN5-208ENST00000549995 SAMD5Q5TGI4 173 aa9.21□□□□□ -0.94
PFDN5-208ENST00000549995 H2BFWTQ7Z2G1 175 aa9.21□□□□□ -0.94
PFDN5-208ENST00000549995 MRPL41Q8IXM3 137 aaKnown RBP9.21□□□□□ -0.94
PFDN5-208ENST00000549995 ZNF114Q8NC26 417 aa9.21□□□□□ -0.94
PFDN5-208ENST00000549995 OR5T1Q8NG75 326 aa9.21□□□□□ -0.94
PFDN5-208ENST00000549995 FANCD2OSQ96PS1 177 aa9.21□□□□□ -0.94
PFDN5-208ENST00000549995 COA4Q9NYJ1 87 aa9.21□□□□□ -0.94
PFDN5-208ENST00000549995 KCNIP3Q9Y2W7 256 aa9.21□□□□□ -0.94
PFDN5-208ENST00000549995 A0A0B4J293 547 aa9.2□□□□□ -0.94
PFDN5-208ENST00000549995 CENPXA8MT69 81 aa9.2□□□□□ -0.94
PFDN5-208ENST00000549995 NUDT19A8MXV4 375 aa9.2□□□□□ -0.94
PFDN5-208ENST00000549995 CCL24O00175 119 aa9.2□□□□□ -0.94
PFDN5-208ENST00000549995 LYRM1O43325 122 aa9.2□□□□□ -0.94
PFDN5-208ENST00000549995 SNAPC5O75971 98 aa9.2□□□□□ -0.94
PFDN5-208ENST00000549995 TRGV3P03979 118 aa9.2□□□□□ -0.94
PFDN5-208ENST00000549995 TRAPPC2P0DI81 140 aa9.2□□□□□ -0.94
PFDN5-208ENST00000549995 TRAPPC2BP0DI82 140 aa9.2□□□□□ -0.94
PFDN5-208ENST00000549995 AREGP15514 252 aa9.2□□□□□ -0.94
PFDN5-208ENST00000549995 HIST1H1BP16401 226 aaKnown RBP9.2□□□□□ -0.94
PFDN5-208ENST00000549995 INPP1P49441 399 aa9.2□□□□□ -0.94
PFDN5-208ENST00000549995 MECP2P51608 486 aaKnown RBP9.2□□□□□ -0.94
PFDN5-208ENST00000549995 CCR6P51684 374 aa9.2□□□□□ -0.94
PFDN5-208ENST00000549995 HSPE1P61604 102 aaKnown RBP9.2□□□□□ -0.94
PFDN5-208ENST00000549995 SRPXP78539 464 aa9.2□□□□□ -0.94
PFDN5-208ENST00000549995 ZNF846Q147U1 533 aa9.2□□□□□ -0.94
PFDN5-208ENST00000549995 TRIM16LQ309B1 348 aa9.2□□□□□ -0.94
PFDN5-208ENST00000549995 NMSQ5H8A3 153 aa9.2□□□□□ -0.94
PFDN5-208ENST00000549995 FAM209BQ5JX69 171 aa9.2□□□□□ -0.94
PFDN5-208ENST00000549995 PVRIGQ6DKI7 326 aa9.2□□□□□ -0.94
PFDN5-208ENST00000549995 ZNF343Q6P1L6 599 aa9.2□□□□□ -0.94
PFDN5-208ENST00000549995 NECAP1Q8NC96 275 aa9.2□□□□□ -0.94
PFDN5-208ENST00000549995 CASTOR1Q8WTX7 329 aa9.2□□□□□ -0.94
PFDN5-208ENST00000549995 OR51B2Q9Y5P1 312 aa9.2□□□□□ -0.94
PFDN5-208ENST00000549995 DMRT1Q9Y5R6 373 aa9.2□□□□□ -0.94
PFDN5-208ENST00000549995 A0A0B4J2A0 478 aa9.19□□□□□ -0.94
PFDN5-208ENST00000549995 DUS4LO95620 317 aaKnown RBP9.19□□□□□ -0.94
PFDN5-208ENST00000549995 DHFRP00374 187 aa9.19□□□□□ -0.94
PFDN5-208ENST00000549995 PF4P02776 101 aa9.19□□□□□ -0.94
PFDN5-208ENST00000549995 OR8U8P0C7N1 319 aa9.19□□□□□ -0.94
PFDN5-208ENST00000549995 ANXA3P12429 323 aa9.19□□□□□ -0.94
PFDN5-208ENST00000549995 AKR1C2P52895 323 aa9.19□□□□□ -0.94
PFDN5-208ENST00000549995 ZNF616Q08AN1 781 aa9.19□□□□□ -0.94
PFDN5-208ENST00000549995 ASAH1Q13510 395 aa9.19□□□□□ -0.94
PFDN5-208ENST00000549995 Q6ZRM9 215 aa9.19□□□□□ -0.94
PFDN5-208ENST00000549995 CENPSQ8N2Z9 138 aa9.19□□□□□ -0.94
PFDN5-208ENST00000549995 OR11H1Q8NG94 326 aa9.19□□□□□ -0.94
PFDN5-208ENST00000549995 OR52E5Q8NH55 327 aa9.19□□□□□ -0.94
PFDN5-208ENST00000549995 OR4A16Q8NH70 328 aa9.19□□□□□ -0.94
PFDN5-208ENST00000549995 RCC1LQ96I51 464 aaKnown RBP9.19□□□□□ -0.94
PFDN5-208ENST00000549995 MS4A10Q96PG2 267 aa9.19□□□□□ -0.94
PFDN5-208ENST00000549995 ATP6V0BQ99437 205 aa9.19□□□□□ -0.94
PFDN5-208ENST00000549995 ALX4Q9H161 411 aaPredicted RBP9.19□□□□□ -0.94
PFDN5-208ENST00000549995 SHPKQ9UHJ6 478 aa9.19□□□□□ -0.94
PFDN5-208ENST00000549995 TBC1D24Q9ULP9 559 aa9.19□□□□□ -0.94
PFDN5-208ENST00000549995 NSG2Q9Y328 171 aa9.19□□□□□ -0.94
PFDN5-208ENST00000549995 UPK1BO75841 260 aa9.18□□□□□ -0.94
PFDN5-208ENST00000549995 SFT2D2O95562 160 aa9.18□□□□□ -0.94
PFDN5-208ENST00000549995 HSPB1P04792 205 aaKnown RBP9.18□□□□□ -0.94
PFDN5-208ENST00000549995 APELAP0DMC3 54 aa9.18□□□□□ -0.94
PFDN5-208ENST00000549995 AKR1C4P17516 323 aa9.18□□□□□ -0.94
PFDN5-208ENST00000549995 RHOGP84095 191 aa9.18□□□□□ -0.94
PFDN5-208ENST00000549995 PPP1R1AQ13522 171 aa9.18□□□□□ -0.94
PFDN5-208ENST00000549995 DEFB136Q30KP8 78 aa9.18□□□□□ -0.94
PFDN5-208ENST00000549995 BSXQ3C1V8 233 aa9.18□□□□□ -0.94
PFDN5-208ENST00000549995 TMEM268Q5VZI3 342 aa9.18□□□□□ -0.94
PFDN5-208ENST00000549995 LGI3Q8N145 548 aa9.18□□□□□ -0.94
PFDN5-208ENST00000549995 SLC35G3Q8N808 338 aa9.18□□□□□ -0.94
PFDN5-208ENST00000549995 OR10W1Q8NGF6 305 aa9.18□□□□□ -0.94
PFDN5-208ENST00000549995 OR1L6Q8NGR2 347 aa9.18□□□□□ -0.94
PFDN5-208ENST00000549995 RRNAD1Q96FB5 475 aaKnown RBP9.18□□□□□ -0.94
PFDN5-208ENST00000549995 CACFD1Q9UGQ2 172 aa9.18□□□□□ -0.94
PFDN5-208ENST00000549995 F11RQ9Y624 299 aaKnown RBP9.18□□□□□ -0.94
PFDN5-208ENST00000549995 IGHV4OR15-8A0A075B7B6 117 aa9.17□□□□□ -0.94
PFDN5-208ENST00000549995 A0A087WW49 117 aa9.17□□□□□ -0.94
PFDN5-208ENST00000549995 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.17□□□□□ -0.94
PFDN5-208ENST00000549995 C13orf42A0A1B0GVH6 325 aa9.17□□□□□ -0.94
PFDN5-208ENST00000549995 LINC01619G3V211 115 aa9.17□□□□□ -0.94
PFDN5-208ENST00000549995 ST8SIA3O43173 380 aa9.17□□□□□ -0.94
PFDN5-208ENST00000549995 SLC25A6P12236 298 aa9.17□□□□□ -0.94
PFDN5-208ENST00000549995 IZUMO4Q1ZYL8 232 aa9.17□□□□□ -0.94
PFDN5-208ENST00000549995 BEAN1Q3B7T3 259 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms