RNA–Protein interactions for RNA: ENST00000536011.5

RTN3-207, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-207ENST00000536011 S1PR2O95136 353 aa9.88□□□□□ -0.83
RTN3-207ENST00000536011 TRAPPC2P0DI81 140 aa9.88□□□□□ -0.83
RTN3-207ENST00000536011 TRAPPC2BP0DI82 140 aa9.88□□□□□ -0.83
RTN3-207ENST00000536011 F2RP25116 425 aa9.88□□□□□ -0.83
RTN3-207ENST00000536011 PTBP1P26599 531 aaKnown RBP eCLIP9.88□□□□□ -0.835e-7■■■■□ 22.4
RTN3-207ENST00000536011 GPR183P32249 361 aa9.88□□□□□ -0.83
RTN3-207ENST00000536011 ELLP55199 621 aaPredicted RBP9.88□□□□□ -0.83
RTN3-207ENST00000536011 PLET1Q6UQ28 207 aa9.88□□□□□ -0.83
RTN3-207ENST00000536011 DHRS11Q6UWP2 260 aa9.88□□□□□ -0.83
RTN3-207ENST00000536011 RBPMS2Q6ZRY4 209 aaKnown RBP9.88□□□□□ -0.83
RTN3-207ENST00000536011 TMEM61Q8N0U2 210 aa9.88□□□□□ -0.83
RTN3-207ENST00000536011 CADM3Q8N126 398 aa9.88□□□□□ -0.83
RTN3-207ENST00000536011 SAMD12Q8N8I0 201 aa9.88□□□□□ -0.83
RTN3-207ENST00000536011 UXS1Q8NBZ7 420 aa9.88□□□□□ -0.83
RTN3-207ENST00000536011 OR1L8Q8NGR8 309 aa9.88□□□□□ -0.83
RTN3-207ENST00000536011 ZNF502Q8TBZ5 544 aa9.88□□□□□ -0.83
RTN3-207ENST00000536011 VN1R17PQ8TDU5 208 aa9.88□□□□□ -0.83
RTN3-207ENST00000536011 CACNG8Q8WXS5 425 aa9.88□□□□□ -0.83
RTN3-207ENST00000536011 MOB3AQ96BX8 217 aa9.88□□□□□ -0.83
RTN3-207ENST00000536011 ZNF2Q9BSG1 426 aaPredicted RBP9.88□□□□□ -0.83
RTN3-207ENST00000536011 S4R3C0 116 aa9.88□□□□□ -0.83
RTN3-207ENST00000536011 CGB1A6NKQ9 187 aa9.87□□□□□ -0.83
RTN3-207ENST00000536011 SNAPC5O75971 98 aa9.87□□□□□ -0.83
RTN3-207ENST00000536011 RLN1P04808 185 aa9.87□□□□□ -0.83
RTN3-207ENST00000536011 GNRHRP30968 328 aa9.87□□□□□ -0.83
RTN3-207ENST00000536011 PRSS3P35030 304 aa9.87□□□□□ -0.83
RTN3-207ENST00000536011 TAS2R20P59543 309 aa9.87□□□□□ -0.83
RTN3-207ENST00000536011 OR1L6Q8NGR2 347 aa9.87□□□□□ -0.83
RTN3-207ENST00000536011 OR6F1Q8NGZ6 308 aa9.87□□□□□ -0.83
RTN3-207ENST00000536011 LSM10Q969L4 123 aaKnown RBP9.87□□□□□ -0.83
RTN3-207ENST00000536011 ATP6V0BQ99437 205 aa9.87□□□□□ -0.83
RTN3-207ENST00000536011 FKBP11Q9NYL4 201 aa9.87□□□□□ -0.83
RTN3-207ENST00000536011 MRPL27Q9P0M9 148 aaKnown RBP9.87□□□□□ -0.83
RTN3-207ENST00000536011 MLXQ9UH92 298 aa9.87□□□□□ -0.83
RTN3-207ENST00000536011 ANAPC10Q9UM13 185 aa9.87□□□□□ -0.83
RTN3-207ENST00000536011 A0A087WXM4 84 aa9.86□□□□□ -0.83
RTN3-207ENST00000536011 TRAV3A0A0B4J244 114 aa9.86□□□□□ -0.83
RTN3-207ENST00000536011 RBMY1BA6NDE4 496 aaKnown RBP9.86□□□□□ -0.83
RTN3-207ENST00000536011 RBMY1EA6NEQ0 496 aaKnown RBP9.86□□□□□ -0.83
RTN3-207ENST00000536011 GPR31O00270 319 aa9.86□□□□□ -0.83
RTN3-207ENST00000536011 PGLYRP1O75594 196 aaPredicted RBP9.86□□□□□ -0.83
RTN3-207ENST00000536011 JTBO76095 146 aa9.86□□□□□ -0.83
RTN3-207ENST00000536011 SERPINE2P07093 398 aa9.86□□□□□ -0.83
RTN3-207ENST00000536011 RBMY1DP0C7P1 496 aaKnown RBP9.86□□□□□ -0.83
RTN3-207ENST00000536011 OR13C7P0DN81 318 aa9.86□□□□□ -0.83
RTN3-207ENST00000536011 RFX2P48378 723 aa9.86□□□□□ -0.83
RTN3-207ENST00000536011 LPCAT3Q6P1A2 487 aa9.86□□□□□ -0.83
RTN3-207ENST00000536011 SPSB3Q6PJ21 355 aa9.86□□□□□ -0.83
RTN3-207ENST00000536011 BTNL8Q6UX41 500 aa9.86□□□□□ -0.83
RTN3-207ENST00000536011 SLC38A6Q8IZM9 456 aa9.86□□□□□ -0.83
RTN3-207ENST00000536011 DGCR14Q96DF8 476 aaKnown RBP9.86□□□□□ -0.83
RTN3-207ENST00000536011 BSCL2Q96G97 398 aaPredicted RBP9.86□□□□□ -0.83
RTN3-207ENST00000536011 TSC22D3Q99576 134 aa9.86□□□□□ -0.83
RTN3-207ENST00000536011 GGTLC1Q9BX51 225 aa9.86□□□□□ -0.83
RTN3-207ENST00000536011 WFDC10AQ9H1F0 79 aa9.86□□□□□ -0.83
RTN3-207ENST00000536011 RETNQ9HD89 108 aa9.86□□□□□ -0.83
RTN3-207ENST00000536011 PRNDQ9UKY0 176 aa9.86□□□□□ -0.83
RTN3-207ENST00000536011 SMIM31A0A1B0GVY4 71 aa9.85□□□□□ -0.83
RTN3-207ENST00000536011 TGOLN2O43493 480 aa9.85□□□□□ -0.83
RTN3-207ENST00000536011 SCAF4O95104 1147 aaKnown RBP9.85□□□□□ -0.83
RTN3-207ENST00000536011 TNFAIP8O95379 198 aa9.85□□□□□ -0.83
RTN3-207ENST00000536011 KRASP01116 189 aa9.85□□□□□ -0.83
RTN3-207ENST00000536011 PMP2P02689 132 aa9.85□□□□□ -0.83
RTN3-207ENST00000536011 C8orf88P0DMB2 117 aa9.85□□□□□ -0.83
RTN3-207ENST00000536011 NAT1P18440 290 aa9.85□□□□□ -0.83
RTN3-207ENST00000536011 EDN2P20800 178 aa9.85□□□□□ -0.83
RTN3-207ENST00000536011 RPS19P39019 145 aaKnown RBP9.85□□□□□ -0.83
RTN3-207ENST00000536011 TM4SF20Q53R12 229 aa9.85□□□□□ -0.83
RTN3-207ENST00000536011 SLC25A24Q6NUK1 477 aa9.85□□□□□ -0.83
RTN3-207ENST00000536011 UNQ9165/PRO28630Q6UXU0 137 aa9.85□□□□□ -0.83
RTN3-207ENST00000536011 OR10W1Q8NGF6 305 aa9.85□□□□□ -0.83
RTN3-207ENST00000536011 OR5B3Q8NH48 314 aa9.85□□□□□ -0.83
RTN3-207ENST00000536011 TMEM190Q8WZ59 177 aa9.85□□□□□ -0.83
RTN3-207ENST00000536011 TMEM56Q96MV1 263 aa9.85□□□□□ -0.83
RTN3-207ENST00000536011 SPAG8Q99932 426 aaPredicted RBP9.85□□□□□ -0.83
RTN3-207ENST00000536011 FAM110AQ9BQ89 295 aa9.85□□□□□ -0.83
RTN3-207ENST00000536011 HINT2Q9BX68 163 aa9.85□□□□□ -0.83
RTN3-207ENST00000536011 ZNF436Q9C0F3 470 aaPredicted RBP9.85□□□□□ -0.83
RTN3-207ENST00000536011 C5orf66Q9H5L9 145 aa9.85□□□□□ -0.83
RTN3-207ENST00000536011 DAZ1Q9NQZ3 744 aaKnown RBP9.85□□□□□ -0.83
RTN3-207ENST00000536011 FAM212BQ9NTI7 297 aaPredicted RBP9.85□□□□□ -0.83
RTN3-207ENST00000536011 GAR1Q9NY12 217 aaKnown RBP9.85□□□□□ -0.83
RTN3-207ENST00000536011 OR51B2Q9Y5P1 312 aa9.85□□□□□ -0.83
RTN3-207ENST00000536011 F11RQ9Y624 299 aaKnown RBP9.85□□□□□ -0.83
RTN3-207ENST00000536011 LOC102724200A0A096LPH7 203 aaPredicted RBP9.84□□□□□ -0.83
RTN3-207ENST00000536011 TEX50A0A1B0GTY4 177 aa9.84□□□□□ -0.83
RTN3-207ENST00000536011 RPA2P15927 270 aa9.84□□□□□ -0.83
RTN3-207ENST00000536011 HRH1P35367 487 aa9.84□□□□□ -0.83
RTN3-207ENST00000536011 LPAR6P43657 344 aa9.84□□□□□ -0.83
RTN3-207ENST00000536011 TSPAN5P62079 268 aa9.84□□□□□ -0.83
RTN3-207ENST00000536011 WT1-ASQ06250 92 aa9.84□□□□□ -0.83
RTN3-207ENST00000536011 ZNF585BQ52M93 769 aa9.84□□□□□ -0.83
RTN3-207ENST00000536011 LAMTOR1Q6IAA8 161 aa9.84□□□□□ -0.83
RTN3-207ENST00000536011 OR2C3Q8N628 320 aa9.84□□□□□ -0.83
RTN3-207ENST00000536011 FCAMRQ8WWV6 532 aa9.84□□□□□ -0.83
RTN3-207ENST00000536011 SLC25A46Q96AG3 418 aa9.84□□□□□ -0.83
RTN3-207ENST00000536011 YIPF6Q96EC8 236 aa9.84□□□□□ -0.83
RTN3-207ENST00000536011 CMTM3Q96MX0 182 aa9.84□□□□□ -0.83
RTN3-207ENST00000536011 SCPEP1Q9HB40 452 aa9.84□□□□□ -0.83
RTN3-207ENST00000536011 NDUFA4L2Q9NRX3 87 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms