RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 MYCNOSP40205 109 aa9.29□□□□□ -0.92
SSBP3-214ENST00000533209 AKR1C2P52895 323 aa9.29□□□□□ -0.92
SSBP3-214ENST00000533209 ZNF846Q147U1 533 aa9.29□□□□□ -0.92
SSBP3-214ENST00000533209 TMEM128Q5BJH2 165 aa9.29□□□□□ -0.92
SSBP3-214ENST00000533209 CTRB2Q6GPI1 263 aa9.29□□□□□ -0.92
SSBP3-214ENST00000533209 C19orf35Q6ZS72 473 aa9.29□□□□□ -0.92
SSBP3-214ENST00000533209 SLC25A42Q86VD7 318 aa9.29□□□□□ -0.92
SSBP3-214ENST00000533209 SELENOHQ8IZQ5 122 aaKnown RBP9.29□□□□□ -0.92
SSBP3-214ENST00000533209 OR10W1Q8NGF6 305 aa9.29□□□□□ -0.92
SSBP3-214ENST00000533209 RBPMSQ93062 196 aaKnown RBP9.29□□□□□ -0.92
SSBP3-214ENST00000533209 TMEM56Q96MV1 263 aa9.29□□□□□ -0.92
SSBP3-214ENST00000533209 P2RX4Q99571 388 aa9.29□□□□□ -0.92
SSBP3-214ENST00000533209 SRSF8Q9BRL6 282 aaKnown RBP9.29□□□□□ -0.92
SSBP3-214ENST00000533209 WDR12Q9GZL7 423 aaKnown RBP9.29□□□□□ -0.92
SSBP3-214ENST00000533209 NDUFA4L2Q9NRX3 87 aa9.29□□□□□ -0.92
SSBP3-214ENST00000533209 FKBP11Q9NYL4 201 aa9.29□□□□□ -0.92
SSBP3-214ENST00000533209 PRR13Q9NZ81 148 aa9.29□□□□□ -0.92
SSBP3-214ENST00000533209 ZNF257Q9Y2Q1 563 aa9.29□□□□□ -0.92
SSBP3-214ENST00000533209 TMEM56-RWDD3S4R434 201 aa9.29□□□□□ -0.92
SSBP3-214ENST00000533209 A0A0B4J293 547 aa9.28□□□□□ -0.92
SSBP3-214ENST00000533209 CCL24O00175 119 aa9.28□□□□□ -0.92
SSBP3-214ENST00000533209 LYRM1O43325 122 aa9.28□□□□□ -0.92
SSBP3-214ENST00000533209 IGHV3-11P01762 117 aa9.28□□□□□ -0.92
SSBP3-214ENST00000533209 REG1AP05451 166 aa9.28□□□□□ -0.92
SSBP3-214ENST00000533209 LGALS1P09382 135 aaKnown RBP9.28□□□□□ -0.92
SSBP3-214ENST00000533209 PSMB6P28072 239 aa9.28□□□□□ -0.92
SSBP3-214ENST00000533209 RHOGP84095 191 aa9.28□□□□□ -0.92
SSBP3-214ENST00000533209 DEFA5Q01523 94 aa9.28□□□□□ -0.92
SSBP3-214ENST00000533209 KLK9Q2XQG4 91 aa9.28□□□□□ -0.92
SSBP3-214ENST00000533209 TMEM268Q5VZI3 342 aa9.28□□□□□ -0.92
SSBP3-214ENST00000533209 THOC7Q6I9Y2 204 aaKnown RBP9.28□□□□□ -0.92
SSBP3-214ENST00000533209 MRPL41Q8IXM3 137 aaKnown RBP9.28□□□□□ -0.92
SSBP3-214ENST00000533209 CENPSQ8N2Z9 138 aa9.28□□□□□ -0.92
SSBP3-214ENST00000533209 LINC00482Q8N8I6 264 aa9.28□□□□□ -0.92
SSBP3-214ENST00000533209 WFDC9Q8NEX5 89 aa9.28□□□□□ -0.92
SSBP3-214ENST00000533209 OR5B3Q8NH48 314 aa9.28□□□□□ -0.92
SSBP3-214ENST00000533209 OR4A16Q8NH70 328 aa9.28□□□□□ -0.92
SSBP3-214ENST00000533209 IL22RA2Q969J5 263 aa9.28□□□□□ -0.92
SSBP3-214ENST00000533209 RRNAD1Q96FB5 475 aaKnown RBP9.28□□□□□ -0.92
SSBP3-214ENST00000533209 HINT2Q9BX68 163 aa9.28□□□□□ -0.92
SSBP3-214ENST00000533209 ALX4Q9H161 411 aaPredicted RBP9.28□□□□□ -0.92
SSBP3-214ENST00000533209 KLK9Q9UKQ9 250 aa9.28□□□□□ -0.92
SSBP3-214ENST00000533209 FLVCR2Q9UPI3 526 aa9.28□□□□□ -0.92
SSBP3-214ENST00000533209 CMYA5Q8N3K9 4069 aa9.27□□□□□ -0.93
SSBP3-214ENST00000533209 A0A0G2JLM5 398 aa9.27□□□□□ -0.93
SSBP3-214ENST00000533209 C13orf42A0A1B0GVH6 325 aa9.27□□□□□ -0.93
SSBP3-214ENST00000533209 HSPE1P61604 102 aaKnown RBP9.27□□□□□ -0.93
SSBP3-214ENST00000533209 WT1-ASQ06250 92 aa9.27□□□□□ -0.93
SSBP3-214ENST00000533209 PPP1R1AQ13522 171 aa9.27□□□□□ -0.93
SSBP3-214ENST00000533209 FHL3Q13643 280 aa9.27□□□□□ -0.93
SSBP3-214ENST00000533209 Q6ZRM9 215 aa9.27□□□□□ -0.93
SSBP3-214ENST00000533209 ZNF429Q86V71 674 aa9.27□□□□□ -0.93
SSBP3-214ENST00000533209 FAM219AQ8IW50 185 aa9.27□□□□□ -0.93
SSBP3-214ENST00000533209 OR11H1Q8NG94 326 aa9.27□□□□□ -0.93
SSBP3-214ENST00000533209 OR1N2Q8NGR9 330 aa9.27□□□□□ -0.93
SSBP3-214ENST00000533209 LSM10Q969L4 123 aaKnown RBP9.27□□□□□ -0.93
SSBP3-214ENST00000533209 USMG5Q96IX5 58 aa9.27□□□□□ -0.93
SSBP3-214ENST00000533209 FANCD2OSQ96PS1 177 aa9.27□□□□□ -0.93
SSBP3-214ENST00000533209 TBC1D24Q9ULP9 559 aa9.27□□□□□ -0.93
SSBP3-214ENST00000533209 NOTCH1P46531 2555 aa9.27□□□□□ -0.93
SSBP3-214ENST00000533209 NOTCH3Q9UM47 2321 aa9.27□□□□□ -0.93
SSBP3-214ENST00000533209 FAM223BA6NKX1 122 aa9.26□□□□□ -0.93
SSBP3-214ENST00000533209 UPK1BO75841 260 aa9.26□□□□□ -0.93
SSBP3-214ENST00000533209 OR2J3O76001 311 aa9.26□□□□□ -0.93
SSBP3-214ENST00000533209 SFT2D2O95562 160 aa9.26□□□□□ -0.93
SSBP3-214ENST00000533209 OR13C7P0DN81 318 aa9.26□□□□□ -0.93
SSBP3-214ENST00000533209 ANXA3P12429 323 aa9.26□□□□□ -0.93
SSBP3-214ENST00000533209 VAMP1P23763 118 aa9.26□□□□□ -0.93
SSBP3-214ENST00000533209 SRPXP78539 464 aa9.26□□□□□ -0.93
SSBP3-214ENST00000533209 PRCDQ00LT1 54 aa9.26□□□□□ -0.93
SSBP3-214ENST00000533209 IFITM3Q01628 133 aa9.26□□□□□ -0.93
SSBP3-214ENST00000533209 ANKRD55Q3KP44 614 aa9.26□□□□□ -0.93
SSBP3-214ENST00000533209 AARDQ4LEZ3 155 aa9.26□□□□□ -0.93
SSBP3-214ENST00000533209 HSD17B13Q7Z5P4 300 aaPredicted RBP9.26□□□□□ -0.93
SSBP3-214ENST00000533209 FAM223AQ8IWN6 122 aa9.26□□□□□ -0.93
SSBP3-214ENST00000533209 LGI3Q8N145 548 aa9.26□□□□□ -0.93
SSBP3-214ENST00000533209 SLC35G3Q8N808 338 aa9.26□□□□□ -0.93
SSBP3-214ENST00000533209 RNASE11Q8TAA1 199 aaKnown RBP9.26□□□□□ -0.93
SSBP3-214ENST00000533209 GPR146Q96CH1 333 aa9.26□□□□□ -0.93
SSBP3-214ENST00000533209 DMRT1Q9Y5R6 373 aa9.26□□□□□ -0.93
SSBP3-214ENST00000533209 IGLV11-55A0A075B6I3 123 aa9.25□□□□□ -0.93
SSBP3-214ENST00000533209 IGHV4OR15-8A0A075B7B6 117 aa9.25□□□□□ -0.93
SSBP3-214ENST00000533209 A0A087WW49 117 aa9.25□□□□□ -0.93
SSBP3-214ENST00000533209 A0A0B4J2A0 478 aa9.25□□□□□ -0.93
SSBP3-214ENST00000533209 ST8SIA3O43173 380 aa9.25□□□□□ -0.93
SSBP3-214ENST00000533209 DHFRP00374 187 aa9.25□□□□□ -0.93
SSBP3-214ENST00000533209 ANXA7P20073 488 aaKnown RBP9.25□□□□□ -0.93
SSBP3-214ENST00000533209 CD33P20138 364 aa9.25□□□□□ -0.93
SSBP3-214ENST00000533209 UBE2MP61081 183 aaKnown RBP9.25□□□□□ -0.93
SSBP3-214ENST00000533209 ATP5G2Q06055 141 aa9.25□□□□□ -0.93
SSBP3-214ENST00000533209 ZNF616Q08AN1 781 aa9.25□□□□□ -0.93
SSBP3-214ENST00000533209 ASAH1Q13510 395 aa9.25□□□□□ -0.93
SSBP3-214ENST00000533209 NMSQ5H8A3 153 aa9.25□□□□□ -0.93
SSBP3-214ENST00000533209 ZNF343Q6P1L6 599 aa9.25□□□□□ -0.93
SSBP3-214ENST00000533209 LYZL2Q7Z4W2 148 aa9.25□□□□□ -0.93
SSBP3-214ENST00000533209 NECAP1Q8NC96 275 aa9.25□□□□□ -0.93
SSBP3-214ENST00000533209 CACNG5Q9UF02 275 aa9.25□□□□□ -0.93
SSBP3-214ENST00000533209 SHPKQ9UHJ6 478 aa9.25□□□□□ -0.93
SSBP3-214ENST00000533209 FBXL7Q9UJT9 491 aa9.25□□□□□ -0.93
SSBP3-214ENST00000533209 MEGF8Q7Z7M0 2845 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms