RNA–Protein interactions for RNA: ENST00000531990.1

CCS-207, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 868 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-207ENST00000531990 DEFB136Q30KP8 78 aa16.15■□□□□ 0.18
CCS-207ENST00000531990 TMEM128Q5BJH2 165 aa16.15■□□□□ 0.18
CCS-207ENST00000531990 CENPSQ8N2Z9 138 aa16.15■□□□□ 0.18
CCS-207ENST00000531990 RAX2Q96IS3 184 aa16.15■□□□□ 0.18
CCS-207ENST00000531990 USMG5Q96IX5 58 aa16.15■□□□□ 0.18
CCS-207ENST00000531990 TMEM14BQ9NUH8 114 aa16.15■□□□□ 0.18
CCS-207ENST00000531990 PIGBOS1A0A0B4J2F0 54 aa16.14■□□□□ 0.17
CCS-207ENST00000531990 IGHV3-11P01762 117 aa16.14■□□□□ 0.17
CCS-207ENST00000531990 DEFA4P12838 97 aa16.14■□□□□ 0.17
CCS-207ENST00000531990 AREGP15514 252 aa16.14■□□□□ 0.17
CCS-207ENST00000531990 SRPXP78539 464 aa16.14■□□□□ 0.17
CCS-207ENST00000531990 TMEM268Q5VZI3 342 aa16.14■□□□□ 0.17
CCS-207ENST00000531990 ETV3LQ6ZN32 361 aa16.14■□□□□ 0.17
CCS-207ENST00000531990 MRPL41Q8IXM3 137 aaKnown RBP16.14■□□□□ 0.17
CCS-207ENST00000531990 OR11H1Q8NG94 326 aa16.14■□□□□ 0.17
CCS-207ENST00000531990 DPF1Q92782 380 aa16.14■□□□□ 0.17
CCS-207ENST00000531990 TMEM56Q96MV1 263 aa16.14■□□□□ 0.17
CCS-207ENST00000531990 DUX3Q96PT4 197 aa16.14■□□□□ 0.17
CCS-207ENST00000531990 P2RX4Q99571 388 aa16.14■□□□□ 0.17
CCS-207ENST00000531990 IGLC7A0M8Q6 106 aa16.13■□□□□ 0.17
CCS-207ENST00000531990 CGB1A6NKQ9 187 aa16.13■□□□□ 0.17
CCS-207ENST00000531990 FAM223BA6NKX1 122 aa16.13■□□□□ 0.17
CCS-207ENST00000531990 I3L521 148 aa16.13■□□□□ 0.17
CCS-207ENST00000531990 NDUFB6O95139 128 aa16.13■□□□□ 0.17
CCS-207ENST00000531990 PRH1P02810 166 aa16.13■□□□□ 0.17
CCS-207ENST00000531990 CRYGCP07315 174 aa16.13■□□□□ 0.17
CCS-207ENST00000531990 MECP2P51608 486 aaKnown RBP16.13■□□□□ 0.17
CCS-207ENST00000531990 RHOGP84095 191 aa16.13■□□□□ 0.17
CCS-207ENST00000531990 TMEM187Q14656 261 aa16.13■□□□□ 0.17
CCS-207ENST00000531990 FAM219AQ8IW50 185 aa16.13■□□□□ 0.17
CCS-207ENST00000531990 FAM223AQ8IWN6 122 aa16.13■□□□□ 0.17
CCS-207ENST00000531990 SELENOHQ8IZQ5 122 aaKnown RBP16.13■□□□□ 0.17
CCS-207ENST00000531990 OR1N2Q8NGR9 330 aa16.13■□□□□ 0.17
CCS-207ENST00000531990 IL22RA2Q969J5 263 aa16.13■□□□□ 0.17
CCS-207ENST00000531990 LSM10Q969L4 123 aaKnown RBP16.13■□□□□ 0.17
CCS-207ENST00000531990 NDUFA4L2Q9NRX3 87 aa16.13■□□□□ 0.17
CCS-207ENST00000531990 TMEM56-RWDD3S4R434 201 aa16.13■□□□□ 0.17
CCS-207ENST00000531990 CYB5BO43169 146 aa16.12■□□□□ 0.17
CCS-207ENST00000531990 LYRM1O43325 122 aa16.12■□□□□ 0.17
CCS-207ENST00000531990 REG1AP05451 166 aa16.12■□□□□ 0.17
CCS-207ENST00000531990 P0C879 139 aa16.12■□□□□ 0.17
CCS-207ENST00000531990 OR13C7P0DN81 318 aa16.12■□□□□ 0.17
CCS-207ENST00000531990 HIST1H1BP16401 226 aaKnown RBP16.12■□□□□ 0.17
CCS-207ENST00000531990 CTRB1P17538 263 aa16.12■□□□□ 0.17
CCS-207ENST00000531990 VAMP1P23763 118 aa16.12■□□□□ 0.17
CCS-207ENST00000531990 RAB25P57735 213 aa16.12■□□□□ 0.17
CCS-207ENST00000531990 SUPT4H1P63272 117 aaKnown RBP16.12■□□□□ 0.17
CCS-207ENST00000531990 ZNF616Q08AN1 781 aa16.12■□□□□ 0.17
CCS-207ENST00000531990 CTRB2Q6GPI1 263 aa16.12■□□□□ 0.17
CCS-207ENST00000531990 LGI3Q8N145 548 aa16.12■□□□□ 0.17
CCS-207ENST00000531990 LINC00482Q8N8I6 264 aa16.12■□□□□ 0.17
CCS-207ENST00000531990 NECAP1Q8NC96 275 aa16.12■□□□□ 0.17
CCS-207ENST00000531990 WFDC9Q8NEX5 89 aa16.12■□□□□ 0.17
CCS-207ENST00000531990 OR10W1Q8NGF6 305 aa16.12■□□□□ 0.17
CCS-207ENST00000531990 LHFPL5Q8TAF8 219 aa16.12■□□□□ 0.17
CCS-207ENST00000531990 PDCD10Q9BUL8 212 aa16.12■□□□□ 0.17
CCS-207ENST00000531990 PLA2G10O15496 165 aa16.11■□□□□ 0.17
CCS-207ENST00000531990 OR8U8P0C7N1 319 aa16.11■□□□□ 0.17
CCS-207ENST00000531990 UBE2MP61081 183 aaKnown RBP16.11■□□□□ 0.17
CCS-207ENST00000531990 HSPE1P61604 102 aaKnown RBP16.11■□□□□ 0.17
CCS-207ENST00000531990 ATP5G2Q06055 141 aa16.11■□□□□ 0.17
CCS-207ENST00000531990 IZUMO4Q1ZYL8 232 aa16.11■□□□□ 0.17
CCS-207ENST00000531990 ZNF429Q86V71 674 aa16.11■□□□□ 0.17
CCS-207ENST00000531990 ALX4Q9H161 411 aaPredicted RBP16.11■□□□□ 0.17
CCS-207ENST00000531990 TRBV9A0A0B4J1U6 114 aa16.1■□□□□ 0.17
CCS-207ENST00000531990 DBX1A6NMT0 343 aa16.1■□□□□ 0.17
CCS-207ENST00000531990 OR2J3O76001 311 aa16.1■□□□□ 0.17
CCS-207ENST00000531990 FBXL7Q9UJT9 491 aa16.1■□□□□ 0.17
CCS-207ENST00000531990 TRRAPQ9Y4A5 3859 aa16.1■□□□□ 0.17
CCS-207ENST00000531990 A0A0B4J293 547 aa16.09■□□□□ 0.17
CCS-207ENST00000531990 LINC01619G3V211 115 aa16.09■□□□□ 0.17
CCS-207ENST00000531990 IFNA17P01571 189 aa16.09■□□□□ 0.17
CCS-207ENST00000531990 HSPB1P04792 205 aaKnown RBP16.09■□□□□ 0.17
CCS-207ENST00000531990 BTCP35070 178 aa16.09■□□□□ 0.17
CCS-207ENST00000531990 PRCDQ00LT1 54 aa16.09■□□□□ 0.17
CCS-207ENST00000531990 DEFA5Q01523 94 aa16.09■□□□□ 0.17
CCS-207ENST00000531990 WT1-ASQ06250 92 aa16.09■□□□□ 0.17
CCS-207ENST00000531990 FHL3Q13643 280 aa16.09■□□□□ 0.17
CCS-207ENST00000531990 C19orf35Q6ZS72 473 aa16.09■□□□□ 0.17
CCS-207ENST00000531990 SLC35G3Q8N808 338 aa16.09■□□□□ 0.17
CCS-207ENST00000531990 RCC1LQ96I51 464 aaKnown RBP16.09■□□□□ 0.17
CCS-207ENST00000531990 PLEKHA3Q9HB20 300 aa16.09■□□□□ 0.17
CCS-207ENST00000531990 RANGRFQ9HD47 186 aaPredicted RBP16.09■□□□□ 0.17
CCS-207ENST00000531990 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.09■□□□□ 0.17
CCS-207ENST00000531990 PRR13Q9NZ81 148 aa16.09■□□□□ 0.17
CCS-207ENST00000531990 THYN1Q9P016 225 aa16.09■□□□□ 0.17
CCS-207ENST00000531990 A0A0B4J2A0 478 aa16.08■□□□□ 0.16
CCS-207ENST00000531990 A0A0G2JRQ6 117 aa16.08■□□□□ 0.16
CCS-207ENST00000531990 PPP1R1AQ13522 171 aa16.08■□□□□ 0.16
CCS-207ENST00000531990 EXOSC2Q13868 293 aaKnown RBP16.08■□□□□ 0.16
CCS-207ENST00000531990 C15orf32Q32M92 178 aa16.08■□□□□ 0.16
CCS-207ENST00000531990 MCRIP2Q9BUT9 160 aaKnown RBP16.08■□□□□ 0.16
CCS-207ENST00000531990 SHPKQ9UHJ6 478 aa16.08■□□□□ 0.16
CCS-207ENST00000531990 IGHV4OR15-8A0A075B7B6 117 aa16.07■□□□□ 0.16
CCS-207ENST00000531990 A0A087WW49 117 aa16.07■□□□□ 0.16
CCS-207ENST00000531990 ANKRD34BA5PLL1 514 aa16.07■□□□□ 0.16
CCS-207ENST00000531990 ST8SIA3O43173 380 aa16.07■□□□□ 0.16
CCS-207ENST00000531990 UPK1BO75841 260 aa16.07■□□□□ 0.16
CCS-207ENST00000531990 SFT2D2O95562 160 aa16.07■□□□□ 0.16
CCS-207ENST00000531990 DUS4LO95620 317 aaKnown RBP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms