RNA–Protein interactions for RNA: ENST00000527902.5

NXF1-206, Transcript of nuclear RNA export factor 1, human

TSL 3

Gene NXF1, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NXF1-206	ENST00000527902	NDUFA4L2	Q9NRX3	87 aa		13.78	□□□□□ -0.2
NXF1-206	ENST00000527902	PRND	Q9UKY0	176 aa		13.78	□□□□□ -0.2
NXF1-206	ENST00000527902	FLVCR2	Q9UPI3	526 aa		13.78	□□□□□ -0.2
NXF1-206	ENST00000527902	TMEM56-RWDD3	S4R434	201 aa		13.78	□□□□□ -0.2
NXF1-206	ENST00000527902		A0A0B4J293	547 aa		13.77	□□□□□ -0.21
NXF1-206	ENST00000527902	NPIPB5	A8MRT5	1133 aa		13.77	□□□□□ -0.21
NXF1-206	ENST00000527902	LYRM1	O43325	122 aa		13.77	□□□□□ -0.21
NXF1-206	ENST00000527902	PF4	P02776	101 aa		13.77	□□□□□ -0.21
NXF1-206	ENST00000527902	CRYGC	P07315	174 aa		13.77	□□□□□ -0.21
NXF1-206	ENST00000527902	CTRB1	P17538	263 aa		13.77	□□□□□ -0.21
NXF1-206	ENST00000527902	PSMB6	P28072	239 aa		13.77	□□□□□ -0.21
NXF1-206	ENST00000527902	WT1-AS	Q06250	92 aa		13.77	□□□□□ -0.21
NXF1-206	ENST00000527902	ZNF846	Q147U1	533 aa		13.77	□□□□□ -0.21
NXF1-206	ENST00000527902	TMEM268	Q5VZI3	342 aa		13.77	□□□□□ -0.21
NXF1-206	ENST00000527902	CTRB2	Q6GPI1	263 aa		13.77	□□□□□ -0.21
NXF1-206	ENST00000527902	LINC00482	Q8N8I6	264 aa		13.77	□□□□□ -0.21
NXF1-206	ENST00000527902	OR1L8	Q8NGR8	309 aa		13.77	□□□□□ -0.21
NXF1-206	ENST00000527902	RBPMS	Q93062	196 aa	Known RBP	13.77	□□□□□ -0.21
NXF1-206	ENST00000527902	TSC22D3	Q99576	134 aa		13.77	□□□□□ -0.21
NXF1-206	ENST00000527902	WDR12	Q9GZL7	423 aa	Known RBP	13.77	□□□□□ -0.21
NXF1-206	ENST00000527902	TBC1D24	Q9ULP9	559 aa		13.77	□□□□□ -0.21
NXF1-206	ENST00000527902	ZNF257	Q9Y2Q1	563 aa		13.77	□□□□□ -0.21
NXF1-206	ENST00000527902	TRBV9	A0A0B4J1U6	114 aa		13.76	□□□□□ -0.21
NXF1-206	ENST00000527902	CENPX	A8MT69	81 aa		13.76	□□□□□ -0.21
NXF1-206	ENST00000527902	CCL24	O00175	119 aa		13.76	□□□□□ -0.21
NXF1-206	ENST00000527902	LGALS1	P09382	135 aa	Known RBP	13.76	□□□□□ -0.21
NXF1-206	ENST00000527902	TRAPPC2	P0DI81	140 aa		13.76	□□□□□ -0.21
NXF1-206	ENST00000527902	TRAPPC2B	P0DI82	140 aa		13.76	□□□□□ -0.21
NXF1-206	ENST00000527902	RUNX1	Q01196	453 aa		13.76	□□□□□ -0.21
NXF1-206	ENST00000527902	IFITM3	Q01628	133 aa		13.76	□□□□□ -0.21
NXF1-206	ENST00000527902	TMEM128	Q5BJH2	165 aa		13.76	□□□□□ -0.21
NXF1-206	ENST00000527902		Q6ZRM9	215 aa		13.76	□□□□□ -0.21
NXF1-206	ENST00000527902	MRPL41	Q8IXM3	137 aa	Known RBP	13.76	□□□□□ -0.21
NXF1-206	ENST00000527902	CENPS	Q8N2Z9	138 aa		13.76	□□□□□ -0.21
NXF1-206	ENST00000527902	OR4A16	Q8NH70	328 aa		13.76	□□□□□ -0.21
NXF1-206	ENST00000527902	HINT2	Q9BX68	163 aa		13.76	□□□□□ -0.21
NXF1-206	ENST00000527902	KCNIP3	Q9Y2W7	256 aa		13.76	□□□□□ -0.21
NXF1-206	ENST00000527902	DMRT1	Q9Y5R6	373 aa		13.76	□□□□□ -0.21
NXF1-206	ENST00000527902	ATG12	O94817	140 aa		13.75	□□□□□ -0.21
NXF1-206	ENST00000527902	MYCNOS	P40205	109 aa		13.75	□□□□□ -0.21
NXF1-206	ENST00000527902	RHOG	P84095	191 aa		13.75	□□□□□ -0.21
NXF1-206	ENST00000527902	PPP1R1A	Q13522	171 aa		13.75	□□□□□ -0.21
NXF1-206	ENST00000527902	FHL3	Q13643	280 aa		13.75	□□□□□ -0.21
NXF1-206	ENST00000527902	SLC25A42	Q86VD7	318 aa		13.75	□□□□□ -0.21
NXF1-206	ENST00000527902	SLC35G3	Q8N808	338 aa		13.75	□□□□□ -0.21
NXF1-206	ENST00000527902	OR11H1	Q8NG94	326 aa		13.75	□□□□□ -0.21
NXF1-206	ENST00000527902	OR5B3	Q8NH48	314 aa		13.75	□□□□□ -0.21
NXF1-206	ENST00000527902	FANCD2OS	Q96PS1	177 aa		13.75	□□□□□ -0.21
NXF1-206	ENST00000527902	SRSF8	Q9BRL6	282 aa	Known RBP	13.75	□□□□□ -0.21
NXF1-206	ENST00000527902	UPK1B	O75841	260 aa		13.74	□□□□□ -0.21
NXF1-206	ENST00000527902	OR2J3	O76001	311 aa		13.74	□□□□□ -0.21
NXF1-206	ENST00000527902	OR13C7	P0DN81	318 aa		13.74	□□□□□ -0.21
NXF1-206	ENST00000527902	ANKRD55	Q3KP44	614 aa		13.74	□□□□□ -0.21
NXF1-206	ENST00000527902	ZNF429	Q86V71	674 aa		13.74	□□□□□ -0.21
NXF1-206	ENST00000527902	WFDC9	Q8NEX5	89 aa		13.74	□□□□□ -0.21
NXF1-206	ENST00000527902	IL22RA2	Q969J5	263 aa		13.74	□□□□□ -0.21
NXF1-206	ENST00000527902	GPR146	Q96CH1	333 aa		13.74	□□□□□ -0.21
NXF1-206	ENST00000527902	RRNAD1	Q96FB5	475 aa	Known RBP	13.74	□□□□□ -0.21
NXF1-206	ENST00000527902	FKBP11	Q9NYL4	201 aa		13.74	□□□□□ -0.21
NXF1-206	ENST00000527902	IGHV4OR15-8	A0A075B7B6	117 aa		13.73	□□□□□ -0.21
NXF1-206	ENST00000527902		A0A087WW49	117 aa		13.73	□□□□□ -0.21
NXF1-206	ENST00000527902	ST8SIA3	O43173	380 aa		13.73	□□□□□ -0.21
NXF1-206	ENST00000527902	SFT2D2	O95562	160 aa		13.73	□□□□□ -0.21
NXF1-206	ENST00000527902	VAMP1	P23763	118 aa		13.73	□□□□□ -0.21
NXF1-206	ENST00000527902	HSPE1	P61604	102 aa	Known RBP	13.73	□□□□□ -0.21
NXF1-206	ENST00000527902	PRCD	Q00LT1	54 aa		13.73	□□□□□ -0.21
NXF1-206	ENST00000527902	KLK9	Q2XQG4	91 aa		13.73	□□□□□ -0.21
NXF1-206	ENST00000527902	SPINK9	Q5DT21	86 aa		13.73	□□□□□ -0.21
NXF1-206	ENST00000527902	THOC7	Q6I9Y2	204 aa	Known RBP	13.73	□□□□□ -0.21
NXF1-206	ENST00000527902	LYZL2	Q7Z4W2	148 aa		13.73	□□□□□ -0.21
NXF1-206	ENST00000527902	OR1N2	Q8NGR9	330 aa		13.73	□□□□□ -0.21
NXF1-206	ENST00000527902	RNASE11	Q8TAA1	199 aa	Known RBP	13.73	□□□□□ -0.21
NXF1-206	ENST00000527902	LSM10	Q969L4	123 aa	Known RBP	13.73	□□□□□ -0.21
NXF1-206	ENST00000527902	KLK9	Q9UKQ9	250 aa		13.73	□□□□□ -0.21
NXF1-206	ENST00000527902	IGLV11-55	A0A075B6I3	123 aa		13.72	□□□□□ -0.21
NXF1-206	ENST00000527902	C13orf42	A0A1B0GVH6	325 aa		13.72	□□□□□ -0.21
NXF1-206	ENST00000527902	NDUFB8	O95169	186 aa		13.72	□□□□□ -0.21
NXF1-206	ENST00000527902	TRBV12-3	P01733	135 aa		13.72	□□□□□ -0.21
NXF1-206	ENST00000527902	ANXA3	P12429	323 aa		13.72	□□□□□ -0.21
NXF1-206	ENST00000527902	ANXA7	P20073	488 aa	Known RBP	13.72	□□□□□ -0.21
NXF1-206	ENST00000527902	MFAP2	P55001	183 aa		13.72	□□□□□ -0.21
NXF1-206	ENST00000527902	ASAH1	Q13510	395 aa		13.72	□□□□□ -0.21
NXF1-206	ENST00000527902	FAM219A	Q8IW50	185 aa		13.72	□□□□□ -0.21
NXF1-206	ENST00000527902	USMG5	Q96IX5	58 aa		13.72	□□□□□ -0.21
NXF1-206	ENST00000527902	CACNG5	Q9UF02	275 aa		13.72	□□□□□ -0.21
NXF1-206	ENST00000527902		A0A0B4J2A0	478 aa		13.71	□□□□□ -0.21
NXF1-206	ENST00000527902		A0A0G2JLM5	398 aa		13.71	□□□□□ -0.21
NXF1-206	ENST00000527902	FAM223B	A6NKX1	122 aa		13.71	□□□□□ -0.21
NXF1-206	ENST00000527902	CD33	P20138	364 aa		13.71	□□□□□ -0.21
NXF1-206	ENST00000527902	ZNF616	Q08AN1	781 aa		13.71	□□□□□ -0.21
NXF1-206	ENST00000527902	C15orf32	Q32M92	178 aa		13.71	□□□□□ -0.21
NXF1-206	ENST00000527902	AARD	Q4LEZ3	155 aa		13.71	□□□□□ -0.21
NXF1-206	ENST00000527902	NMS	Q5H8A3	153 aa		13.71	□□□□□ -0.21
NXF1-206	ENST00000527902	ZNF343	Q6P1L6	599 aa		13.71	□□□□□ -0.21
NXF1-206	ENST00000527902	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	13.71	□□□□□ -0.21
NXF1-206	ENST00000527902	FAM223A	Q8IWN6	122 aa		13.71	□□□□□ -0.21
NXF1-206	ENST00000527902	LGI3	Q8N145	548 aa		13.71	□□□□□ -0.21
NXF1-206	ENST00000527902	NECAP1	Q8NC96	275 aa		13.71	□□□□□ -0.21
NXF1-206	ENST00000527902	C20orf85	Q9H1P6	137 aa		13.71	□□□□□ -0.21
NXF1-206	ENST00000527902	SHPK	Q9UHJ6	478 aa		13.71	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms