RNA–Protein interactions for RNA: ENST00000526433.1

SSSCA1-202, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 739 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-202ENST00000526433 GDPD1Q8N9F7 314 aa12.5□□□□□ -0.41
SSSCA1-202ENST00000526433 NECAP1Q8NC96 275 aa12.5□□□□□ -0.41
SSSCA1-202ENST00000526433 OR10W1Q8NGF6 305 aa12.5□□□□□ -0.41
SSSCA1-202ENST00000526433 DLX4Q92988 240 aaPredicted RBP12.5□□□□□ -0.41
SSSCA1-202ENST00000526433 SCGB3A2Q96PL1 93 aa12.5□□□□□ -0.41
SSSCA1-202ENST00000526433 TSC22D3Q99576 134 aa12.5□□□□□ -0.41
SSSCA1-202ENST00000526433 SRSF8Q9BRL6 282 aaKnown RBP12.5□□□□□ -0.41
SSSCA1-202ENST00000526433 HINT2Q9BX68 163 aa12.5□□□□□ -0.41
SSSCA1-202ENST00000526433 SRRQ9GZT4 340 aa12.5□□□□□ -0.41
SSSCA1-202ENST00000526433 FKBP11Q9NYL4 201 aa12.5□□□□□ -0.41
SSSCA1-202ENST00000526433 PRNDQ9UKY0 176 aa12.5□□□□□ -0.41
SSSCA1-202ENST00000526433 TEX13DA0A0J9YY54 714 aaPredicted RBP12.49□□□□□ -0.41
SSSCA1-202ENST00000526433 IGLC7A0M8Q6 106 aa12.49□□□□□ -0.41
SSSCA1-202ENST00000526433 SEC14L6B5MCN3 397 aa12.49□□□□□ -0.41
SSSCA1-202ENST00000526433 OVOL1O14753 267 aa12.49□□□□□ -0.41
SSSCA1-202ENST00000526433 DHFRP00374 187 aa12.49□□□□□ -0.41
SSSCA1-202ENST00000526433 HOXD3P31249 432 aaPredicted RBP12.49□□□□□ -0.41
SSSCA1-202ENST00000526433 FAUP35544 74 aaKnown RBP12.49□□□□□ -0.41
SSSCA1-202ENST00000526433 THOC7Q6I9Y2 204 aaKnown RBP12.49□□□□□ -0.41
SSSCA1-202ENST00000526433 OR4A16Q8NH70 328 aa12.49□□□□□ -0.41
SSSCA1-202ENST00000526433 FANCD2OSQ96PS1 177 aa12.49□□□□□ -0.41
SSSCA1-202ENST00000526433 NDUFA4L2Q9NRX3 87 aa12.49□□□□□ -0.41
SSSCA1-202ENST00000526433 PEF1Q9UBV8 284 aaKnown RBP12.49□□□□□ -0.41
SSSCA1-202ENST00000526433 FBXL7Q9UJT9 491 aa12.49□□□□□ -0.41
SSSCA1-202ENST00000526433 DBX1A6NMT0 343 aa12.48□□□□□ -0.41
SSSCA1-202ENST00000526433 WIPF1O43516 503 aa12.48□□□□□ -0.41
SSSCA1-202ENST00000526433 B3GALNT1O75752 331 aa12.48□□□□□ -0.41
SSSCA1-202ENST00000526433 NDUFB8O95169 186 aa12.48□□□□□ -0.41
SSSCA1-202ENST00000526433 IGKV1-5P01602 117 aa12.48□□□□□ -0.41
SSSCA1-202ENST00000526433 OR13C7P0DN81 318 aa12.48□□□□□ -0.41
SSSCA1-202ENST00000526433 DEFA4P12838 97 aa12.48□□□□□ -0.41
SSSCA1-202ENST00000526433 UCP1P25874 307 aa12.48□□□□□ -0.41
SSSCA1-202ENST00000526433 KRTAP10-11P60412 298 aa12.48□□□□□ -0.41
SSSCA1-202ENST00000526433 KLK9Q2XQG4 91 aa12.48□□□□□ -0.41
SSSCA1-202ENST00000526433 TRIM16LQ309B1 348 aa12.48□□□□□ -0.41
SSSCA1-202ENST00000526433 PDLIM3Q53GG5 364 aaPredicted RBP12.48□□□□□ -0.41
SSSCA1-202ENST00000526433 C9orf66Q5T8R8 295 aa12.48□□□□□ -0.41
SSSCA1-202ENST00000526433 NAA60Q9H7X0 242 aa12.48□□□□□ -0.41
SSSCA1-202ENST00000526433 TMEM14BQ9NUH8 114 aa12.48□□□□□ -0.41
SSSCA1-202ENST00000526433 KLK9Q9UKQ9 250 aa12.48□□□□□ -0.41
SSSCA1-202ENST00000526433 CRYM-AS1A6NIL9 109 aa12.47□□□□□ -0.41
SSSCA1-202ENST00000526433 C15orf61A6NNL5 157 aa12.47□□□□□ -0.41
SSSCA1-202ENST00000526433 ATG12O94817 140 aa12.47□□□□□ -0.41
SSSCA1-202ENST00000526433 TRBV12-3P01733 135 aa12.47□□□□□ -0.41
SSSCA1-202ENST00000526433 OR5AC1P0C628 307 aa12.47□□□□□ -0.41
SSSCA1-202ENST00000526433 HIST1H1BP16401 226 aaKnown RBP12.47□□□□□ -0.41
SSSCA1-202ENST00000526433 WT1-ASQ06250 92 aa12.47□□□□□ -0.41
SSSCA1-202ENST00000526433 EGFEM1PQ0D2K5 195 aa12.47□□□□□ -0.41
SSSCA1-202ENST00000526433 EXOSC2Q13868 293 aaKnown RBP12.47□□□□□ -0.41
SSSCA1-202ENST00000526433 BAK1Q16611 211 aa12.47□□□□□ -0.41
SSSCA1-202ENST00000526433 IZUMO4Q1ZYL8 232 aa12.47□□□□□ -0.41
SSSCA1-202ENST00000526433 C15orf32Q32M92 178 aa12.47□□□□□ -0.41
SSSCA1-202ENST00000526433 ZNF57Q68EA5 555 aaPredicted RBP12.47□□□□□ -0.41
SSSCA1-202ENST00000526433 HSD17B13Q7Z5P4 300 aaPredicted RBP12.47□□□□□ -0.41
SSSCA1-202ENST00000526433 OR5B3Q8NH48 314 aa12.47□□□□□ -0.41
SSSCA1-202ENST00000526433 GLYATL2Q8WU03 294 aa12.47□□□□□ -0.41
SSSCA1-202ENST00000526433 TMEM222Q9H0R3 208 aa12.47□□□□□ -0.41
SSSCA1-202ENST00000526433 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.46□□□□□ -0.41
SSSCA1-202ENST00000526433 A6NHS1 94 aa12.46□□□□□ -0.41
SSSCA1-202ENST00000526433 CDS2O95674 445 aa12.46□□□□□ -0.41
SSSCA1-202ENST00000526433 P0C879 139 aa12.46□□□□□ -0.41
SSSCA1-202ENST00000526433 ZP3P21754 424 aa12.46□□□□□ -0.41
SSSCA1-202ENST00000526433 AKR1C2P52895 323 aa12.46□□□□□ -0.41
SSSCA1-202ENST00000526433 DHODHQ02127 395 aa12.46□□□□□ -0.41
SSSCA1-202ENST00000526433 REC114Q7Z4M0 266 aa12.46□□□□□ -0.41
SSSCA1-202ENST00000526433 SGPP2Q8IWX5 399 aa12.46□□□□□ -0.41
SSSCA1-202ENST00000526433 DEDD2Q8WXF8 326 aa12.46□□□□□ -0.41
SSSCA1-202ENST00000526433 LSM10Q969L4 123 aaKnown RBP12.46□□□□□ -0.41
SSSCA1-202ENST00000526433 TMEM230Q96A57 120 aa12.46□□□□□ -0.41
SSSCA1-202ENST00000526433 TMEM56Q96MV1 263 aa12.46□□□□□ -0.41
SSSCA1-202ENST00000526433 SDHCQ99643 169 aaPredicted RBP12.46□□□□□ -0.41
SSSCA1-202ENST00000526433 AURKAIP1Q9NWT8 199 aaPredicted RBP12.46□□□□□ -0.41
SSSCA1-202ENST00000526433 KCNIP3Q9Y2W7 256 aa12.46□□□□□ -0.41
SSSCA1-202ENST00000526433 IGLV11-55A0A075B6I3 123 aa12.45□□□□□ -0.42
SSSCA1-202ENST00000526433 A0A0B4J293 547 aa12.45□□□□□ -0.42
SSSCA1-202ENST00000526433 AKR1C4P17516 323 aa12.45□□□□□ -0.42
SSSCA1-202ENST00000526433 INPP1P49441 399 aa12.45□□□□□ -0.42
SSSCA1-202ENST00000526433 MECP2P51608 486 aaKnown RBP12.45□□□□□ -0.42
SSSCA1-202ENST00000526433 HSPE1P61604 102 aaKnown RBP12.45□□□□□ -0.42
SSSCA1-202ENST00000526433 KLF5Q13887 457 aaPredicted RBP12.45□□□□□ -0.42
SSSCA1-202ENST00000526433 SELENOHQ8IZQ5 122 aaKnown RBP12.45□□□□□ -0.42
SSSCA1-202ENST00000526433 RRNAD1Q96FB5 475 aaKnown RBP12.45□□□□□ -0.42
SSSCA1-202ENST00000526433 DMRT1Q9Y5R6 373 aa12.45□□□□□ -0.42
SSSCA1-202ENST00000526433 PRKDCP78527 4128 aaKnown RBP12.45□□□□□ -0.42
SSSCA1-202ENST00000526433 SORL1Q92673 2214 aa12.44□□□□□ -0.42
SSSCA1-202ENST00000526433 TRIQKQ629K1 86 aa12.44□□□□□ -0.42
SSSCA1-202ENST00000526433 SLC25A24Q6NUK1 477 aa12.44□□□□□ -0.42
SSSCA1-202ENST00000526433 ACSM6Q6P461 480 aa12.44□□□□□ -0.42
SSSCA1-202ENST00000526433 LHFPL5Q8TAF8 219 aa12.44□□□□□ -0.42
SSSCA1-202ENST00000526433 ZMAT5Q9UDW3 170 aaKnown RBP12.44□□□□□ -0.42
SSSCA1-202ENST00000526433 S4R3C0 116 aa12.44□□□□□ -0.42
SSSCA1-202ENST00000526433 A0A0G2JRQ6 117 aa12.43□□□□□ -0.42
SSSCA1-202ENST00000526433 CYB5BO43169 146 aa12.43□□□□□ -0.42
SSSCA1-202ENST00000526433 IGHV3-23P01764 117 aa12.43□□□□□ -0.42
SSSCA1-202ENST00000526433 INSL3P51460 131 aa12.43□□□□□ -0.42
SSSCA1-202ENST00000526433 PRCDQ00LT1 54 aa12.43□□□□□ -0.42
SSSCA1-202ENST00000526433 TMEM187Q14656 261 aa12.43□□□□□ -0.42
SSSCA1-202ENST00000526433 TATDN3Q17R31 274 aa12.43□□□□□ -0.42
SSSCA1-202ENST00000526433 RPEL1Q2QD12 228 aa12.43□□□□□ -0.42
SSSCA1-202ENST00000526433 FAM209BQ5JX69 171 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms