RNA–Protein interactions for RNA: ENST00000524213.5

CSGALNACT1-216, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 2

Gene CSGALNACT1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-216ENST00000524213 FAM219AQ8IW50 185 aa12.88□□□□□ -0.35
CSGALNACT1-216ENST00000524213 MRPL41Q8IXM3 137 aaKnown RBP12.88□□□□□ -0.35
CSGALNACT1-216ENST00000524213 RNASE11Q8TAA1 199 aaKnown RBP12.88□□□□□ -0.35
CSGALNACT1-216ENST00000524213 CASTOR1Q8WTX7 329 aa12.88□□□□□ -0.35
CSGALNACT1-216ENST00000524213 GLYATL2Q8WU03 294 aa12.88□□□□□ -0.35
CSGALNACT1-216ENST00000524213 RBPMSQ93062 196 aaKnown RBP12.88□□□□□ -0.35
CSGALNACT1-216ENST00000524213 TMEM56Q96MV1 263 aa12.88□□□□□ -0.35
CSGALNACT1-216ENST00000524213 NSG2Q9Y328 171 aa12.88□□□□□ -0.35
CSGALNACT1-216ENST00000524213 FAM223BA6NKX1 122 aa12.87□□□□□ -0.35
CSGALNACT1-216ENST00000524213 CYB5BO43169 146 aa12.87□□□□□ -0.35
CSGALNACT1-216ENST00000524213 DUS4LO95620 317 aaKnown RBP12.87□□□□□ -0.35
CSGALNACT1-216ENST00000524213 MYOD1P15172 320 aa12.87□□□□□ -0.35
CSGALNACT1-216ENST00000524213 HIST1H1BP16401 226 aaKnown RBP12.87□□□□□ -0.35
CSGALNACT1-216ENST00000524213 AKR1C4P17516 323 aa12.87□□□□□ -0.35
CSGALNACT1-216ENST00000524213 PDLIM3Q53GG5 364 aaPredicted RBP12.87□□□□□ -0.35
CSGALNACT1-216ENST00000524213 FAM223AQ8IWN6 122 aa12.87□□□□□ -0.35
CSGALNACT1-216ENST00000524213 LINC00482Q8N8I6 264 aa12.87□□□□□ -0.35
CSGALNACT1-216ENST00000524213 OR11H1Q8NG94 326 aa12.87□□□□□ -0.35
CSGALNACT1-216ENST00000524213 DPF1Q92782 380 aa12.87□□□□□ -0.35
CSGALNACT1-216ENST00000524213 IL22RA2Q969J5 263 aa12.87□□□□□ -0.35
CSGALNACT1-216ENST00000524213 TMEM230Q96A57 120 aa12.87□□□□□ -0.35
CSGALNACT1-216ENST00000524213 RAX2Q96IS3 184 aa12.87□□□□□ -0.35
CSGALNACT1-216ENST00000524213 WDR12Q9GZL7 423 aaKnown RBP12.87□□□□□ -0.35
CSGALNACT1-216ENST00000524213 TMEM14BQ9NUH8 114 aa12.87□□□□□ -0.35
CSGALNACT1-216ENST00000524213 TRBV9A0A0B4J1U6 114 aa12.86□□□□□ -0.35
CSGALNACT1-216ENST00000524213 A0A1B0GW64 132 aa12.86□□□□□ -0.35
CSGALNACT1-216ENST00000524213 CGB1A6NKQ9 187 aa12.86□□□□□ -0.35
CSGALNACT1-216ENST00000524213 RBMXL2O75526 392 aaKnown RBP12.86□□□□□ -0.35
CSGALNACT1-216ENST00000524213 OR8U8P0C7N1 319 aa12.86□□□□□ -0.35
CSGALNACT1-216ENST00000524213 CTRB1P17538 263 aa12.86□□□□□ -0.35
CSGALNACT1-216ENST00000524213 SRPXP78539 464 aa12.86□□□□□ -0.35
CSGALNACT1-216ENST00000524213 ZNF616Q08AN1 781 aa12.86□□□□□ -0.35
CSGALNACT1-216ENST00000524213 TMEM128Q5BJH2 165 aa12.86□□□□□ -0.35
CSGALNACT1-216ENST00000524213 FAM209BQ5JX69 171 aa12.86□□□□□ -0.35
CSGALNACT1-216ENST00000524213 CTRB2Q6GPI1 263 aa12.86□□□□□ -0.35
CSGALNACT1-216ENST00000524213 TMED4Q7Z7H5 227 aa12.86□□□□□ -0.35
CSGALNACT1-216ENST00000524213 OR1N2Q8NGR9 330 aa12.86□□□□□ -0.35
CSGALNACT1-216ENST00000524213 LSM10Q969L4 123 aaKnown RBP12.86□□□□□ -0.35
CSGALNACT1-216ENST00000524213 RCC1LQ96I51 464 aaKnown RBP12.86□□□□□ -0.35
CSGALNACT1-216ENST00000524213 OR5B12Q96R08 314 aa12.86□□□□□ -0.35
CSGALNACT1-216ENST00000524213 MCRIP2Q9BUT9 160 aaKnown RBP12.86□□□□□ -0.35
CSGALNACT1-216ENST00000524213 NDUFA4L2Q9NRX3 87 aa12.86□□□□□ -0.35
CSGALNACT1-216ENST00000524213 LINC00854A0A1B0GVQ3 168 aa12.85□□□□□ -0.35
CSGALNACT1-216ENST00000524213 IGKV1-5P01602 117 aa12.85□□□□□ -0.35
CSGALNACT1-216ENST00000524213 IGHV3-11P01762 117 aa12.85□□□□□ -0.35
CSGALNACT1-216ENST00000524213 HSPB1P04792 205 aaKnown RBP12.85□□□□□ -0.35
CSGALNACT1-216ENST00000524213 DEFA4P12838 97 aa12.85□□□□□ -0.35
CSGALNACT1-216ENST00000524213 AREGP15514 252 aa12.85□□□□□ -0.35
CSGALNACT1-216ENST00000524213 IGLL1P15814 213 aa12.85□□□□□ -0.35
CSGALNACT1-216ENST00000524213 TMEM187Q14656 261 aa12.85□□□□□ -0.35
CSGALNACT1-216ENST00000524213 ZNF846Q147U1 533 aa12.85□□□□□ -0.35
CSGALNACT1-216ENST00000524213 DEFB136Q30KP8 78 aa12.85□□□□□ -0.35
CSGALNACT1-216ENST00000524213 KPRPQ5T749 579 aaPredicted RBP12.85□□□□□ -0.35
CSGALNACT1-216ENST00000524213 ZNF429Q86V71 674 aa12.85□□□□□ -0.35
CSGALNACT1-216ENST00000524213 SELENOHQ8IZQ5 122 aaKnown RBP12.85□□□□□ -0.35
CSGALNACT1-216ENST00000524213 CENPSQ8N2Z9 138 aa12.85□□□□□ -0.35
CSGALNACT1-216ENST00000524213 NECAP1Q8NC96 275 aa12.85□□□□□ -0.35
CSGALNACT1-216ENST00000524213 DUX3Q96PT4 197 aa12.85□□□□□ -0.35
CSGALNACT1-216ENST00000524213 PDCD10Q9BUL8 212 aa12.85□□□□□ -0.35
CSGALNACT1-216ENST00000524213 HINT2Q9BX68 163 aa12.85□□□□□ -0.35
CSGALNACT1-216ENST00000524213 GPR61Q9BZJ8 451 aa12.85□□□□□ -0.35
CSGALNACT1-216ENST00000524213 TMEM56-RWDD3S4R434 201 aa12.85□□□□□ -0.35
CSGALNACT1-216ENST00000524213 IGLC7A0M8Q6 106 aa12.84□□□□□ -0.35
CSGALNACT1-216ENST00000524213 LINC01619G3V211 115 aa12.84□□□□□ -0.35
CSGALNACT1-216ENST00000524213 NDUFB6O95139 128 aa12.84□□□□□ -0.35
CSGALNACT1-216ENST00000524213 P0C879 139 aa12.84□□□□□ -0.35
CSGALNACT1-216ENST00000524213 UBE2MP61081 183 aaKnown RBP12.84□□□□□ -0.35
CSGALNACT1-216ENST00000524213 HSPE1P61604 102 aaKnown RBP12.84□□□□□ -0.35
CSGALNACT1-216ENST00000524213 RHOGP84095 191 aa12.84□□□□□ -0.35
CSGALNACT1-216ENST00000524213 ATP5G2Q06055 141 aa12.84□□□□□ -0.35
CSGALNACT1-216ENST00000524213 FHL3Q13643 280 aa12.84□□□□□ -0.35
CSGALNACT1-216ENST00000524213 KLK9Q2XQG4 91 aa12.84□□□□□ -0.35
CSGALNACT1-216ENST00000524213 TMEM268Q5VZI3 342 aa12.84□□□□□ -0.35
CSGALNACT1-216ENST00000524213 LGI3Q8N145 548 aa12.84□□□□□ -0.35
CSGALNACT1-216ENST00000524213 OR1L6Q8NGR2 347 aa12.84□□□□□ -0.35
CSGALNACT1-216ENST00000524213 RANGRFQ9HD47 186 aaPredicted RBP12.84□□□□□ -0.35
CSGALNACT1-216ENST00000524213 THYN1Q9P016 225 aa12.84□□□□□ -0.35
CSGALNACT1-216ENST00000524213 CACFD1Q9UGQ2 172 aa12.84□□□□□ -0.35
CSGALNACT1-216ENST00000524213 KLK9Q9UKQ9 250 aa12.84□□□□□ -0.35
CSGALNACT1-216ENST00000524213 LYRM1O43325 122 aa12.83□□□□□ -0.36
CSGALNACT1-216ENST00000524213 PRB2P02812 416 aaPredicted RBP12.83□□□□□ -0.36
CSGALNACT1-216ENST00000524213 OR13C7P0DN81 318 aa12.83□□□□□ -0.36
CSGALNACT1-216ENST00000524213 MECP2P51608 486 aaKnown RBP12.83□□□□□ -0.36
CSGALNACT1-216ENST00000524213 CCR6P51684 374 aa12.83□□□□□ -0.36
CSGALNACT1-216ENST00000524213 RAB25P57735 213 aa12.83□□□□□ -0.36
CSGALNACT1-216ENST00000524213 PRCDQ00LT1 54 aa12.83□□□□□ -0.36
CSGALNACT1-216ENST00000524213 ZNF343Q6P1L6 599 aa12.83□□□□□ -0.36
CSGALNACT1-216ENST00000524213 LHFPL5Q8TAF8 219 aa12.83□□□□□ -0.36
CSGALNACT1-216ENST00000524213 TGP01266 2768 aa12.83□□□□□ -0.36
CSGALNACT1-216ENST00000524213 DUXBA0A1W2PPF3 345 aa12.82□□□□□ -0.36
CSGALNACT1-216ENST00000524213 OR2J3O76001 311 aa12.82□□□□□ -0.36
CSGALNACT1-216ENST00000524213 PRH1P02810 166 aa12.82□□□□□ -0.36
CSGALNACT1-216ENST00000524213 REG1AP05451 166 aa12.82□□□□□ -0.36
CSGALNACT1-216ENST00000524213 VAMP1P23763 118 aa12.82□□□□□ -0.36
CSGALNACT1-216ENST00000524213 SUPT4H1P63272 117 aaKnown RBP12.82□□□□□ -0.36
CSGALNACT1-216ENST00000524213 ERHP84090 104 aaKnown RBP12.82□□□□□ -0.36
CSGALNACT1-216ENST00000524213 OR10W1Q8NGF6 305 aa12.82□□□□□ -0.36
CSGALNACT1-216ENST00000524213 FANCD2OSQ96PS1 177 aa12.82□□□□□ -0.36
CSGALNACT1-216ENST00000524213 ALX4Q9H161 411 aaPredicted RBP12.82□□□□□ -0.36
CSGALNACT1-216ENST00000524213 PLEKHA3Q9HB20 300 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms