RNA–Protein interactions for RNA: ENST00000520539.5

UBR5-207, Transcript of ubiquitin protein ligase E3 component n-recognin 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UBR5, Length 10,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR5-207ENST00000520539 PRSS12P56730 875 aa13.34□□□□□ -0.27
UBR5-207ENST00000520539 TMEM126AQ9H061 195 aa13.34□□□□□ -0.27
UBR5-207ENST00000520539 CXCL16Q9H2A7 254 aa13.34□□□□□ -0.27
UBR5-207ENST00000520539 RCC1LQ96I51 464 aaKnown RBP13.33□□□□□ -0.27
UBR5-207ENST00000520539 ZNF488Q96MN9 340 aa13.33□□□□□ -0.27
UBR5-207ENST00000520539 CRYBB3P26998 211 aa13.33□□□□□ -0.28
UBR5-207ENST00000520539 HELZP42694 1942 aaKnown RBP13.33□□□□□ -0.28
UBR5-207ENST00000520539 EVI2AP22794 236 aa13.33□□□□□ -0.28
UBR5-207ENST00000520539 LOXL2Q9Y4K0 774 aa13.33□□□□□ -0.28
UBR5-207ENST00000520539 CSPG4Q6UVK1 2322 aa13.33□□□□□ -0.28
UBR5-207ENST00000520539 A0A1W2PQD3 144 aa13.33□□□□□ -0.28
UBR5-207ENST00000520539 HAPLN4Q86UW8 402 aa13.33□□□□□ -0.28
UBR5-207ENST00000520539 FAM89BQ8N5H3 189 aa13.33□□□□□ -0.28
UBR5-207ENST00000520539 EGR2P11161 476 aaPredicted RBP13.33□□□□□ -0.28
UBR5-207ENST00000520539 GAGE1Q13065 139 aa13.33□□□□□ -0.28
UBR5-207ENST00000520539 ASPHD2Q6ICH7 369 aa13.33□□□□□ -0.28
UBR5-207ENST00000520539 PLPPR2Q96GM1 343 aa13.33□□□□□ -0.28
UBR5-207ENST00000520539 INO80CQ6PI98 192 aaPredicted RBP13.33□□□□□ -0.28
UBR5-207ENST00000520539 WDR82Q6UXN9 313 aa13.33□□□□□ -0.28
UBR5-207ENST00000520539 UBL5Q9BZL1 73 aa13.33□□□□□ -0.28
UBR5-207ENST00000520539 COL16A1Q07092 1604 aaPredicted RBP13.33□□□□□ -0.28
UBR5-207ENST00000520539 MDKP21741 143 aaPredicted RBP13.33□□□□□ -0.28
UBR5-207ENST00000520539 FAM90A2PQ658T7 463 aa13.33□□□□□ -0.28
UBR5-207ENST00000520539 MRPL43Q8N983 215 aaKnown RBP13.33□□□□□ -0.28
UBR5-207ENST00000520539 TMEM91Q6ZNR0 172 aa13.32□□□□□ -0.28
UBR5-207ENST00000520539 SSTR5P35346 364 aa13.32□□□□□ -0.28
UBR5-207ENST00000520539 TDGF1P3P51864 188 aa13.32□□□□□ -0.28
UBR5-207ENST00000520539 NABP2Q9BQ15 211 aa13.32□□□□□ -0.28
UBR5-207ENST00000520539 FER1L6-AS1Q8NA97 138 aa13.32□□□□□ -0.28
UBR5-207ENST00000520539 TMEM202A6NGA9 273 aa13.32□□□□□ -0.28
UBR5-207ENST00000520539 GFRA3O60609 400 aa13.32□□□□□ -0.28
UBR5-207ENST00000520539 INSL4Q14641 139 aa13.32□□□□□ -0.28
UBR5-207ENST00000520539 TMEM74BQ9NUR3 256 aa13.32□□□□□ -0.28
UBR5-207ENST00000520539 NPPCP23582 126 aa13.31□□□□□ -0.28
UBR5-207ENST00000520539 STRCQ7RTU9 1775 aa13.31□□□□□ -0.28
UBR5-207ENST00000520539 PIGYQ3MUY2 71 aa13.31□□□□□ -0.28
UBR5-207ENST00000520539 IGHG4P01861 327 aa13.31□□□□□ -0.28
UBR5-207ENST00000520539 IGHV3-20A0A0C4DH32 117 aa13.31□□□□□ -0.28
UBR5-207ENST00000520539 SOCS1O15524 211 aa13.31□□□□□ -0.28
UBR5-207ENST00000520539 ZNHIT1O43257 154 aa13.31□□□□□ -0.28
UBR5-207ENST00000520539 FCN3O75636 299 aa13.31□□□□□ -0.28
UBR5-207ENST00000520539 DCAF12L2Q5VW00 463 aa13.31□□□□□ -0.28
UBR5-207ENST00000520539 HCFC1R1Q9NWW0 138 aa13.31□□□□□ -0.28
UBR5-207ENST00000520539 TRGV8A0A0C4DH27 118 aa13.31□□□□□ -0.28
UBR5-207ENST00000520539 CACNG8Q8WXS5 425 aa13.31□□□□□ -0.28
UBR5-207ENST00000520539 SF3B6Q9Y3B4 125 aaKnown RBP13.31□□□□□ -0.28
UBR5-207ENST00000520539 MOSP00540 346 aa13.31□□□□□ -0.28
UBR5-207ENST00000520539 TOMM7Q9P0U1 55 aa13.31□□□□□ -0.28
UBR5-207ENST00000520539 GLULP15104 373 aa13.31□□□□□ -0.28
UBR5-207ENST00000520539 COL10A1Q03692 680 aa13.31□□□□□ -0.28
UBR5-207ENST00000520539 LMO7DNF2Z398 122 aa13.31□□□□□ -0.28
UBR5-207ENST00000520539 SOCS3O14543 225 aa13.31□□□□□ -0.28
UBR5-207ENST00000520539 CNRIP1Q96F85 164 aaPredicted RBP13.31□□□□□ -0.28
UBR5-207ENST00000520539 C1QL1O75973 258 aa13.3□□□□□ -0.28
UBR5-207ENST00000520539 C1orf194Q5T5A4 169 aa13.3□□□□□ -0.28
UBR5-207ENST00000520539 VSIG8P0DPA2 414 aa13.3□□□□□ -0.28
UBR5-207ENST00000520539 DUX5Q96PT3 197 aa13.3□□□□□ -0.28
UBR5-207ENST00000520539 ST6GALNAC2Q9UJ37 374 aa13.3□□□□□ -0.28
UBR5-207ENST00000520539 MGST3O14880 152 aa13.3□□□□□ -0.28
UBR5-207ENST00000520539 LINC00305Q7Z4B0 112 aa13.3□□□□□ -0.28
UBR5-207ENST00000520539 IGKV3D-11A0A0A0MRZ8 115 aa13.3□□□□□ -0.28
UBR5-207ENST00000520539 IGKV3-11P04433 115 aa13.3□□□□□ -0.28
UBR5-207ENST00000520539 PTGDSP41222 190 aa13.3□□□□□ -0.28
UBR5-207ENST00000520539 OTOGLQ3ZCN5 2332 aa13.3□□□□□ -0.28
UBR5-207ENST00000520539 IQCF6A8MYZ5 107 aa13.29□□□□□ -0.28
UBR5-207ENST00000520539 TCTEX1D4Q5JR98 221 aa13.29□□□□□ -0.28
UBR5-207ENST00000520539 HIST1H2BLQ99880 126 aa13.29□□□□□ -0.28
UBR5-207ENST00000520539 IGKV3-7A0A075B6H7 116 aa13.29□□□□□ -0.28
UBR5-207ENST00000520539 IGKV3OR2-268A0A0C4DH90 116 aa13.29□□□□□ -0.28
UBR5-207ENST00000520539 FOXI3A8MTJ6 420 aaPredicted RBP13.29□□□□□ -0.28
UBR5-207ENST00000520539 UPK2O00526 184 aa13.29□□□□□ -0.28
UBR5-207ENST00000520539 GMLQ99445 158 aa13.29□□□□□ -0.28
UBR5-207ENST00000520539 TRAV41A0A0B4J266 112 aa13.29□□□□□ -0.28
UBR5-207ENST00000520539 LDLRAD4O15165 306 aa13.29□□□□□ -0.28
UBR5-207ENST00000520539 FGF12P61328 243 aa13.29□□□□□ -0.28
UBR5-207ENST00000520539 ST6GALNAC6Q969X2 333 aa13.29□□□□□ -0.28
UBR5-207ENST00000520539 MS4A4AQ96JQ5 239 aa13.29□□□□□ -0.28
UBR5-207ENST00000520539 TRAV24A0A0B4J272 114 aa13.29□□□□□ -0.28
UBR5-207ENST00000520539 P2RY6Q15077 328 aa13.29□□□□□ -0.28
UBR5-207ENST00000520539 MARF1Q9Y4F3 1742 aaKnown RBP13.29□□□□□ -0.28
UBR5-207ENST00000520539 CCL27Q9Y4X3 112 aa13.29□□□□□ -0.28
UBR5-207ENST00000520539 TICRRQ7Z2Z1 1910 aa13.29□□□□□ -0.28
UBR5-207ENST00000520539 LIPT2A6NK58 231 aa13.29□□□□□ -0.28
UBR5-207ENST00000520539 C12orf76Q8N812 135 aaPredicted RBP13.29□□□□□ -0.28
UBR5-207ENST00000520539 M0R381 172 aa13.29□□□□□ -0.28
UBR5-207ENST00000520539 PRTN3P24158 256 aa13.29□□□□□ -0.28
UBR5-207ENST00000520539 ZNF793Q6ZN11 406 aa13.29□□□□□ -0.28
UBR5-207ENST00000520539 RNF186Q9NXI6 227 aa13.29□□□□□ -0.28
UBR5-207ENST00000520539 VSIG10L2P0DP72 767 aa13.28□□□□□ -0.28
UBR5-207ENST00000520539 FRMPD3Q5JV73 1810 aa13.28□□□□□ -0.28
UBR5-207ENST00000520539 RND2P52198 227 aa13.28□□□□□ -0.28
UBR5-207ENST00000520539 IFI27L1Q96BM0 104 aa13.28□□□□□ -0.28
UBR5-207ENST00000520539 WBP1LQ9NX94 342 aa13.28□□□□□ -0.28
UBR5-207ENST00000520539 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.28□□□□□ -0.28
UBR5-207ENST00000520539 A0A0U1RQS6 177 aa13.28□□□□□ -0.28
UBR5-207ENST00000520539 ZNF385AQ96PM9 386 aaKnown RBP13.28□□□□□ -0.28
UBR5-207ENST00000520539 GAGE12JA6NER3 117 aa13.28□□□□□ -0.28
UBR5-207ENST00000520539 GAGE7O76087 117 aa13.28□□□□□ -0.28
UBR5-207ENST00000520539 BGLAPP02818 100 aa13.28□□□□□ -0.28
UBR5-207ENST00000520539 GAGE12FP0CL80 117 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms