RNA–Protein interactions for RNA: ENST00000505054.2

SYNE4-207, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 713 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-207ENST00000505054 C4orf3Q8WVX3 66 aa13.06□□□□□ -0.32
SYNE4-207ENST00000505054 TSC22D3Q99576 134 aa13.06□□□□□ -0.32
SYNE4-207ENST00000505054 SLA2Q9H6Q3 261 aa13.06□□□□□ -0.32
SYNE4-207ENST00000505054 ZNF355PQ9NSJ1 428 aa13.06□□□□□ -0.32
SYNE4-207ENST00000505054 TMEM14BQ9NUH8 114 aa13.06□□□□□ -0.32
SYNE4-207ENST00000505054 COA4Q9NYJ1 87 aa13.06□□□□□ -0.32
SYNE4-207ENST00000505054 PRR13Q9NZ81 148 aa13.06□□□□□ -0.32
SYNE4-207ENST00000505054 PRNDQ9UKY0 176 aa13.06□□□□□ -0.32
SYNE4-207ENST00000505054 IGLC7A0M8Q6 106 aa13.05□□□□□ -0.32
SYNE4-207ENST00000505054 NPIPB5A8MRT5 1133 aa13.05□□□□□ -0.32
SYNE4-207ENST00000505054 I3L521 148 aa13.05□□□□□ -0.32
SYNE4-207ENST00000505054 NDUFB6O95139 128 aa13.05□□□□□ -0.32
SYNE4-207ENST00000505054 PRH1P02810 166 aa13.05□□□□□ -0.32
SYNE4-207ENST00000505054 AKR1C2P52895 323 aa13.05□□□□□ -0.32
SYNE4-207ENST00000505054 DEFA5Q01523 94 aa13.05□□□□□ -0.32
SYNE4-207ENST00000505054 DHODHQ02127 395 aa13.05□□□□□ -0.32
SYNE4-207ENST00000505054 ZNF846Q147U1 533 aa13.05□□□□□ -0.32
SYNE4-207ENST00000505054 C11orf87Q6NUJ2 197 aa13.05□□□□□ -0.32
SYNE4-207ENST00000505054 SELENOHQ8IZQ5 122 aaKnown RBP13.05□□□□□ -0.32
SYNE4-207ENST00000505054 RAX2Q96IS3 184 aa13.05□□□□□ -0.32
SYNE4-207ENST00000505054 DUX3Q96PT4 197 aa13.05□□□□□ -0.32
SYNE4-207ENST00000505054 OR5B12Q96R08 314 aa13.05□□□□□ -0.32
SYNE4-207ENST00000505054 QTRT1Q9BXR0 403 aaKnown RBP13.05□□□□□ -0.32
SYNE4-207ENST00000505054 WDR12Q9GZL7 423 aaKnown RBP13.05□□□□□ -0.32
SYNE4-207ENST00000505054 OR51B2Q9Y5P1 312 aa13.05□□□□□ -0.32
SYNE4-207ENST00000505054 CENPXA8MT69 81 aa13.04□□□□□ -0.32
SYNE4-207ENST00000505054 LYRM1O43325 122 aa13.04□□□□□ -0.32
SYNE4-207ENST00000505054 PF4P02776 101 aa13.04□□□□□ -0.32
SYNE4-207ENST00000505054 RUNX1Q01196 453 aa13.04□□□□□ -0.32
SYNE4-207ENST00000505054 TMEM268Q5VZI3 342 aa13.04□□□□□ -0.32
SYNE4-207ENST00000505054 OR10W1Q8NGF6 305 aa13.04□□□□□ -0.32
SYNE4-207ENST00000505054 OR1L8Q8NGR8 309 aa13.04□□□□□ -0.32
SYNE4-207ENST00000505054 RBPMSQ93062 196 aaKnown RBP13.04□□□□□ -0.32
SYNE4-207ENST00000505054 RCC1LQ96I51 464 aaKnown RBP13.04□□□□□ -0.32
SYNE4-207ENST00000505054 TMEM56Q96MV1 263 aa13.04□□□□□ -0.32
SYNE4-207ENST00000505054 P2RX4Q99571 388 aa13.04□□□□□ -0.32
SYNE4-207ENST00000505054 NDUFA4L2Q9NRX3 87 aa13.04□□□□□ -0.32
SYNE4-207ENST00000505054 ZNF257Q9Y2Q1 563 aa13.04□□□□□ -0.32
SYNE4-207ENST00000505054 KCNIP3Q9Y2W7 256 aa13.04□□□□□ -0.32
SYNE4-207ENST00000505054 TMEM56-RWDD3S4R434 201 aa13.04□□□□□ -0.32
SYNE4-207ENST00000505054 A0A0B4J293 547 aa13.03□□□□□ -0.32
SYNE4-207ENST00000505054 ATG12O94817 140 aa13.03□□□□□ -0.32
SYNE4-207ENST00000505054 DUS4LO95620 317 aaKnown RBP13.03□□□□□ -0.32
SYNE4-207ENST00000505054 IGHV3-11P01762 117 aa13.03□□□□□ -0.32
SYNE4-207ENST00000505054 REG1AP05451 166 aa13.03□□□□□ -0.32
SYNE4-207ENST00000505054 CRYGCP07315 174 aa13.03□□□□□ -0.32
SYNE4-207ENST00000505054 TRAPPC2P0DI81 140 aa13.03□□□□□ -0.32
SYNE4-207ENST00000505054 TRAPPC2BP0DI82 140 aa13.03□□□□□ -0.32
SYNE4-207ENST00000505054 CTRB1P17538 263 aa13.03□□□□□ -0.32
SYNE4-207ENST00000505054 PSMB6P28072 239 aa13.03□□□□□ -0.32
SYNE4-207ENST00000505054 TMEM128Q5BJH2 165 aa13.03□□□□□ -0.32
SYNE4-207ENST00000505054 CTRB2Q6GPI1 263 aa13.03□□□□□ -0.32
SYNE4-207ENST00000505054 SLC25A42Q86VD7 318 aa13.03□□□□□ -0.32
SYNE4-207ENST00000505054 CENPSQ8N2Z9 138 aa13.03□□□□□ -0.32
SYNE4-207ENST00000505054 OR5B3Q8NH48 314 aa13.03□□□□□ -0.32
SYNE4-207ENST00000505054 OR4A16Q8NH70 328 aa13.03□□□□□ -0.32
SYNE4-207ENST00000505054 SRSF8Q9BRL6 282 aaKnown RBP13.03□□□□□ -0.32
SYNE4-207ENST00000505054 ALX4Q9H161 411 aaPredicted RBP13.03□□□□□ -0.32
SYNE4-207ENST00000505054 TBC1D24Q9ULP9 559 aa13.03□□□□□ -0.32
SYNE4-207ENST00000505054 FLVCR2Q9UPI3 526 aa13.03□□□□□ -0.32
SYNE4-207ENST00000505054 TRBV9A0A0B4J1U6 114 aa13.02□□□□□ -0.33
SYNE4-207ENST00000505054 CCL24O00175 119 aa13.02□□□□□ -0.33
SYNE4-207ENST00000505054 LGALS1P09382 135 aaKnown RBP13.02□□□□□ -0.33
SYNE4-207ENST00000505054 MYCNOSP40205 109 aa13.02□□□□□ -0.33
SYNE4-207ENST00000505054 WT1-ASQ06250 92 aa13.02□□□□□ -0.33
SYNE4-207ENST00000505054 PPP1R1AQ13522 171 aa13.02□□□□□ -0.33
SYNE4-207ENST00000505054 FHL3Q13643 280 aa13.02□□□□□ -0.33
SYNE4-207ENST00000505054 THOC7Q6I9Y2 204 aaKnown RBP13.02□□□□□ -0.33
SYNE4-207ENST00000505054 Q6ZRM9 215 aa13.02□□□□□ -0.33
SYNE4-207ENST00000505054 MRPL41Q8IXM3 137 aaKnown RBP13.02□□□□□ -0.33
SYNE4-207ENST00000505054 LINC00482Q8N8I6 264 aa13.02□□□□□ -0.33
SYNE4-207ENST00000505054 IL22RA2Q969J5 263 aa13.02□□□□□ -0.33
SYNE4-207ENST00000505054 RRNAD1Q96FB5 475 aaKnown RBP13.02□□□□□ -0.33
SYNE4-207ENST00000505054 HINT2Q9BX68 163 aa13.02□□□□□ -0.33
SYNE4-207ENST00000505054 FKBP11Q9NYL4 201 aa13.02□□□□□ -0.33
SYNE4-207ENST00000505054 UPK1BO75841 260 aa13.01□□□□□ -0.33
SYNE4-207ENST00000505054 ANXA3P12429 323 aa13.01□□□□□ -0.33
SYNE4-207ENST00000505054 VAMP1P23763 118 aa13.01□□□□□ -0.33
SYNE4-207ENST00000505054 RHOGP84095 191 aa13.01□□□□□ -0.33
SYNE4-207ENST00000505054 IFITM3Q01628 133 aa13.01□□□□□ -0.33
SYNE4-207ENST00000505054 KLK9Q2XQG4 91 aa13.01□□□□□ -0.33
SYNE4-207ENST00000505054 ZNF429Q86V71 674 aa13.01□□□□□ -0.33
SYNE4-207ENST00000505054 SLC35G3Q8N808 338 aa13.01□□□□□ -0.33
SYNE4-207ENST00000505054 RNASE11Q8TAA1 199 aaKnown RBP13.01□□□□□ -0.33
SYNE4-207ENST00000505054 LSM10Q969L4 123 aaKnown RBP13.01□□□□□ -0.33
SYNE4-207ENST00000505054 FANCD2OSQ96PS1 177 aa13.01□□□□□ -0.33
SYNE4-207ENST00000505054 KLK9Q9UKQ9 250 aa13.01□□□□□ -0.33
SYNE4-207ENST00000505054 SFT2D2O95562 160 aa13□□□□□ -0.33
SYNE4-207ENST00000505054 OR13C7P0DN81 318 aa13□□□□□ -0.33
SYNE4-207ENST00000505054 HSPE1P61604 102 aaKnown RBP13□□□□□ -0.33
SYNE4-207ENST00000505054 SRPXP78539 464 aa13□□□□□ -0.33
SYNE4-207ENST00000505054 PRCDQ00LT1 54 aa13□□□□□ -0.33
SYNE4-207ENST00000505054 ANKRD55Q3KP44 614 aa13□□□□□ -0.33
SYNE4-207ENST00000505054 HSD17B13Q7Z5P4 300 aaPredicted RBP13□□□□□ -0.33
SYNE4-207ENST00000505054 FAM219AQ8IW50 185 aa13□□□□□ -0.33
SYNE4-207ENST00000505054 OR11H1Q8NG94 326 aa13□□□□□ -0.33
SYNE4-207ENST00000505054 GPR146Q96CH1 333 aa13□□□□□ -0.33
SYNE4-207ENST00000505054 DMRT1Q9Y5R6 373 aa13□□□□□ -0.33
SYNE4-207ENST00000505054 TENM3Q9P273 2699 aa13□□□□□ -0.33
SYNE4-207ENST00000505054 IGLV11-55A0A075B6I3 123 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms