RNA–Protein interactions for RNA: ENST00000494836.2

YIF1A-209, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2

Gene YIF1A, Length 540 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-209ENST00000494836 TRAPPC2P0DI81 140 aa12.57□□□□□ -0.4
YIF1A-209ENST00000494836 TRAPPC2BP0DI82 140 aa12.57□□□□□ -0.4
YIF1A-209ENST00000494836 AKR1C4P17516 323 aa12.57□□□□□ -0.4
YIF1A-209ENST00000494836 PSMB6P28072 239 aa12.57□□□□□ -0.4
YIF1A-209ENST00000494836 RHOGP84095 191 aa12.57□□□□□ -0.4
YIF1A-209ENST00000494836 DEFA5Q01523 94 aa12.57□□□□□ -0.4
YIF1A-209ENST00000494836 DHODHQ02127 395 aa12.57□□□□□ -0.4
YIF1A-209ENST00000494836 FAM223AQ8IWN6 122 aa12.57□□□□□ -0.4
YIF1A-209ENST00000494836 OR5B3Q8NH48 314 aa12.57□□□□□ -0.4
YIF1A-209ENST00000494836 RNASE11Q8TAA1 199 aaKnown RBP12.57□□□□□ -0.4
YIF1A-209ENST00000494836 GLYATL2Q8WU03 294 aa12.57□□□□□ -0.4
YIF1A-209ENST00000494836 DPF1Q92782 380 aa12.57□□□□□ -0.4
YIF1A-209ENST00000494836 TMEM230Q96A57 120 aa12.57□□□□□ -0.4
YIF1A-209ENST00000494836 RCC1LQ96I51 464 aaKnown RBP12.57□□□□□ -0.4
YIF1A-209ENST00000494836 HINT2Q9BX68 163 aa12.57□□□□□ -0.4
YIF1A-209ENST00000494836 TMEM14BQ9NUH8 114 aa12.57□□□□□ -0.4
YIF1A-209ENST00000494836 KCNIP3Q9Y2W7 256 aa12.57□□□□□ -0.4
YIF1A-209ENST00000494836 TRBV9A0A0B4J1U6 114 aa12.56□□□□□ -0.4
YIF1A-209ENST00000494836 LINC00854A0A1B0GVQ3 168 aa12.56□□□□□ -0.4
YIF1A-209ENST00000494836 G3V4G9 280 aa12.56□□□□□ -0.4
YIF1A-209ENST00000494836 CDS2O95674 445 aa12.56□□□□□ -0.4
YIF1A-209ENST00000494836 REG1AP05451 166 aa12.56□□□□□ -0.4
YIF1A-209ENST00000494836 CRYGCP07315 174 aa12.56□□□□□ -0.4
YIF1A-209ENST00000494836 OR8U8P0C7N1 319 aa12.56□□□□□ -0.4
YIF1A-209ENST00000494836 DEFA4P12838 97 aa12.56□□□□□ -0.4
YIF1A-209ENST00000494836 IGLL1P15814 213 aa12.56□□□□□ -0.4
YIF1A-209ENST00000494836 CTRB1P17538 263 aa12.56□□□□□ -0.4
YIF1A-209ENST00000494836 SAMD5Q5TGI4 173 aa12.56□□□□□ -0.4
YIF1A-209ENST00000494836 CTRB2Q6GPI1 263 aa12.56□□□□□ -0.4
YIF1A-209ENST00000494836 C19orf35Q6ZS72 473 aa12.56□□□□□ -0.4
YIF1A-209ENST00000494836 HSD17B13Q7Z5P4 300 aaPredicted RBP12.56□□□□□ -0.4
YIF1A-209ENST00000494836 TMED4Q7Z7H5 227 aa12.56□□□□□ -0.4
YIF1A-209ENST00000494836 C1QL4Q86Z23 238 aa12.56□□□□□ -0.4
YIF1A-209ENST00000494836 NECAP1Q8NC96 275 aa12.56□□□□□ -0.4
YIF1A-209ENST00000494836 OR10W1Q8NGF6 305 aa12.56□□□□□ -0.4
YIF1A-209ENST00000494836 RRNAD1Q96FB5 475 aaKnown RBP12.56□□□□□ -0.4
YIF1A-209ENST00000494836 GALNT14Q96FL9 552 aa12.56□□□□□ -0.4
YIF1A-209ENST00000494836 NDUFA4L2Q9NRX3 87 aa12.56□□□□□ -0.4
YIF1A-209ENST00000494836 DBX1A6NMT0 343 aa12.55□□□□□ -0.4
YIF1A-209ENST00000494836 CENPXA8MT69 81 aa12.55□□□□□ -0.4
YIF1A-209ENST00000494836 LINC01619G3V211 115 aa12.55□□□□□ -0.4
YIF1A-209ENST00000494836 DUS4LO95620 317 aaKnown RBP12.55□□□□□ -0.4
YIF1A-209ENST00000494836 P0C879 139 aa12.55□□□□□ -0.4
YIF1A-209ENST00000494836 RBMS2Q15434 407 aaKnown RBP12.55□□□□□ -0.4
YIF1A-209ENST00000494836 IZUMO4Q1ZYL8 232 aa12.55□□□□□ -0.4
YIF1A-209ENST00000494836 OXLD1Q5BKU9 147 aa12.55□□□□□ -0.4
YIF1A-209ENST00000494836 S100ZQ8WXG8 99 aa12.55□□□□□ -0.4
YIF1A-209ENST00000494836 RBPMSQ93062 196 aaKnown RBP12.55□□□□□ -0.4
YIF1A-209ENST00000494836 LSM10Q969L4 123 aaKnown RBP12.55□□□□□ -0.4
YIF1A-209ENST00000494836 TMEM56Q96MV1 263 aa12.55□□□□□ -0.4
YIF1A-209ENST00000494836 C7orf50Q9BRJ6 194 aaKnown RBP12.55□□□□□ -0.4
YIF1A-209ENST00000494836 IGHV4OR15-8A0A075B7B6 117 aa12.54□□□□□ -0.4
YIF1A-209ENST00000494836 A0A087WW49 117 aa12.54□□□□□ -0.4
YIF1A-209ENST00000494836 OR2J3O76001 311 aa12.54□□□□□ -0.4
YIF1A-209ENST00000494836 HSPB1P04792 205 aaKnown RBP12.54□□□□□ -0.4
YIF1A-209ENST00000494836 OR13C7P0DN81 318 aa12.54□□□□□ -0.4
YIF1A-209ENST00000494836 ANXA3P12429 323 aa12.54□□□□□ -0.4
YIF1A-209ENST00000494836 CCR6P51684 374 aa12.54□□□□□ -0.4
YIF1A-209ENST00000494836 ATP5G2Q06055 141 aa12.54□□□□□ -0.4
YIF1A-209ENST00000494836 WT1-ASQ06250 92 aa12.54□□□□□ -0.4
YIF1A-209ENST00000494836 TMEM268Q5VZI3 342 aa12.54□□□□□ -0.4
YIF1A-209ENST00000494836 LHFPL5Q8TAF8 219 aa12.54□□□□□ -0.4
YIF1A-209ENST00000494836 MCRIP2Q9BUT9 160 aaKnown RBP12.54□□□□□ -0.4
YIF1A-209ENST00000494836 CCDC32Q9BV29 185 aa12.54□□□□□ -0.4
YIF1A-209ENST00000494836 TMEM56-RWDD3S4R434 201 aa12.54□□□□□ -0.4
YIF1A-209ENST00000494836 ANKRD34BA5PLL1 514 aa12.53□□□□□ -0.4
YIF1A-209ENST00000494836 HIST1H1BP16401 226 aaKnown RBP12.53□□□□□ -0.4
YIF1A-209ENST00000494836 MECP2P51608 486 aaKnown RBP12.53□□□□□ -0.4
YIF1A-209ENST00000494836 SUPT4H1P63272 117 aaKnown RBP12.53□□□□□ -0.4
YIF1A-209ENST00000494836 SRPXP78539 464 aa12.53□□□□□ -0.4
YIF1A-209ENST00000494836 EXOSC2Q13868 293 aaKnown RBP12.53□□□□□ -0.4
YIF1A-209ENST00000494836 TMEM187Q14656 261 aa12.53□□□□□ -0.4
YIF1A-209ENST00000494836 C15orf32Q32M92 178 aa12.53□□□□□ -0.4
YIF1A-209ENST00000494836 TMEM128Q5BJH2 165 aa12.53□□□□□ -0.4
YIF1A-209ENST00000494836 ZNF343Q6P1L6 599 aa12.53□□□□□ -0.4
YIF1A-209ENST00000494836 ZNF429Q86V71 674 aa12.53□□□□□ -0.4
YIF1A-209ENST00000494836 FAM219AQ8IW50 185 aa12.53□□□□□ -0.4
YIF1A-209ENST00000494836 SELENOHQ8IZQ5 122 aaKnown RBP12.53□□□□□ -0.4
YIF1A-209ENST00000494836 CENPSQ8N2Z9 138 aa12.53□□□□□ -0.4
YIF1A-209ENST00000494836 IL22RA2Q969J5 263 aa12.53□□□□□ -0.4
YIF1A-209ENST00000494836 FANCD2OSQ96PS1 177 aa12.53□□□□□ -0.4
YIF1A-209ENST00000494836 GPR61Q9BZJ8 451 aa12.53□□□□□ -0.4
YIF1A-209ENST00000494836 RANGRFQ9HD47 186 aaPredicted RBP12.53□□□□□ -0.4
YIF1A-209ENST00000494836 FBXL7Q9UJT9 491 aa12.53□□□□□ -0.4
YIF1A-209ENST00000494836 IGLV11-55A0A075B6I3 123 aa12.52□□□□□ -0.41
YIF1A-209ENST00000494836 A0A0B4J293 547 aa12.52□□□□□ -0.41
YIF1A-209ENST00000494836 A0A0G2JRQ6 117 aa12.52□□□□□ -0.41
YIF1A-209ENST00000494836 CYB5BO43169 146 aa12.52□□□□□ -0.41
YIF1A-209ENST00000494836 NDUFB6O95139 128 aa12.52□□□□□ -0.41
YIF1A-209ENST00000494836 VAMP1P23763 118 aa12.52□□□□□ -0.41
YIF1A-209ENST00000494836 SLURP1P55000 103 aa12.52□□□□□ -0.41
YIF1A-209ENST00000494836 HSPE1P61604 102 aaKnown RBP12.52□□□□□ -0.41
YIF1A-209ENST00000494836 PRCDQ00LT1 54 aa12.52□□□□□ -0.41
YIF1A-209ENST00000494836 KLK9Q2XQG4 91 aa12.52□□□□□ -0.41
YIF1A-209ENST00000494836 PDCD10Q9BUL8 212 aa12.52□□□□□ -0.41
YIF1A-209ENST00000494836 PRR13Q9NZ81 148 aa12.52□□□□□ -0.41
YIF1A-209ENST00000494836 PEF1Q9UBV8 284 aaKnown RBP12.52□□□□□ -0.41
YIF1A-209ENST00000494836 KLK9Q9UKQ9 250 aa12.52□□□□□ -0.41
YIF1A-209ENST00000494836 ZP3P21754 424 aa12.51□□□□□ -0.41
YIF1A-209ENST00000494836 BEAN1Q3B7T3 259 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms