RNA–Protein interactions for RNA: ENST00000489741.1

PRPF40A-210, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-210ENST00000489741 MAFIPQ8WZ33 124 aa4.75□□□□□ -1.65
PRPF40A-210ENST00000489741 MGLLQ99685 303 aa4.75□□□□□ -1.65
PRPF40A-210ENST00000489741 SPIN2AQ99865 258 aa4.75□□□□□ -1.65
PRPF40A-210ENST00000489741 SPIN2BQ9BPZ2 258 aa4.75□□□□□ -1.65
PRPF40A-210ENST00000489741 PLEKHA3Q9HB20 300 aa4.75□□□□□ -1.65
PRPF40A-210ENST00000489741 ACOT13Q9NPJ3 140 aa4.75□□□□□ -1.65
PRPF40A-210ENST00000489741 COA4Q9NYJ1 87 aa4.75□□□□□ -1.65
PRPF40A-210ENST00000489741 TECRQ9NZ01 308 aaKnown RBP4.75□□□□□ -1.65
PRPF40A-210ENST00000489741 ELF5Q9UKW6 265 aaPredicted RBP4.75□□□□□ -1.65
PRPF40A-210ENST00000489741 ALMS1Q8TCU4 4167 aa4.75□□□□□ -1.65
PRPF40A-210ENST00000489741 IGKV1D-13A0A0B4J2D9 117 aa4.74□□□□□ -1.65
PRPF40A-210ENST00000489741 NPIPB5A8MRT5 1133 aa4.74□□□□□ -1.65
PRPF40A-210ENST00000489741 GGCTO75223 188 aaKnown RBP4.74□□□□□ -1.65
PRPF40A-210ENST00000489741 TPPPO94811 219 aa4.74□□□□□ -1.65
PRPF40A-210ENST00000489741 OR2C1O95371 312 aa4.74□□□□□ -1.65
PRPF40A-210ENST00000489741 ZNF735P0CB33 412 aa4.74□□□□□ -1.65
PRPF40A-210ENST00000489741 HSMCR30P0CW71 290 aa4.74□□□□□ -1.65
PRPF40A-210ENST00000489741 IGKV1-13P0DP09 117 aa4.74□□□□□ -1.65
PRPF40A-210ENST00000489741 EDN2P20800 178 aa4.74□□□□□ -1.65
PRPF40A-210ENST00000489741 DTYMKP23919 212 aa4.74□□□□□ -1.65
PRPF40A-210ENST00000489741 CRHBPP24387 322 aa4.74□□□□□ -1.65
PRPF40A-210ENST00000489741 MAP2K4P45985 399 aa4.74□□□□□ -1.65
PRPF40A-210ENST00000489741 OR10A3P58181 314 aa4.74□□□□□ -1.65
PRPF40A-210ENST00000489741 CD81P60033 236 aa4.74□□□□□ -1.65
PRPF40A-210ENST00000489741 CBX3Q13185 183 aa4.74□□□□□ -1.65
PRPF40A-210ENST00000489741 EXOSC2Q13868 293 aaKnown RBP4.74□□□□□ -1.65
PRPF40A-210ENST00000489741 SSX1Q16384 188 aa4.74□□□□□ -1.65
PRPF40A-210ENST00000489741 C15orf32Q32M92 178 aa4.74□□□□□ -1.65
PRPF40A-210ENST00000489741 C10orf55Q5SWW7 151 aa4.74□□□□□ -1.65
PRPF40A-210ENST00000489741 HES5Q5TA89 166 aa4.74□□□□□ -1.65
PRPF40A-210ENST00000489741 SLC25A42Q86VD7 318 aa4.74□□□□□ -1.65
PRPF40A-210ENST00000489741 MMD2Q8IY49 270 aa4.74□□□□□ -1.65
PRPF40A-210ENST00000489741 ZNF645Q8N7E2 425 aa4.74□□□□□ -1.65
PRPF40A-210ENST00000489741 PRR26Q8N8Z3 221 aa4.74□□□□□ -1.65
PRPF40A-210ENST00000489741 TMEM167AQ8TBQ9 72 aa4.74□□□□□ -1.65
PRPF40A-210ENST00000489741 URB1-AS1Q96HZ7 61 aa4.74□□□□□ -1.65
PRPF40A-210ENST00000489741 PHB2Q99623 299 aa4.74□□□□□ -1.65
PRPF40A-210ENST00000489741 FAM110AQ9BQ89 295 aa4.74□□□□□ -1.65
PRPF40A-210ENST00000489741 OVOL2Q9BRP0 275 aa4.74□□□□□ -1.65
PRPF40A-210ENST00000489741 WFDC10AQ9H1F0 79 aa4.74□□□□□ -1.65
PRPF40A-210ENST00000489741 OR51E2Q9H255 320 aa4.74□□□□□ -1.65
PRPF40A-210ENST00000489741 SLC2A9Q9NRM0 540 aa4.74□□□□□ -1.65
PRPF40A-210ENST00000489741 TPRKBQ9Y3C4 175 aa4.74□□□□□ -1.65
PRPF40A-210ENST00000489741 TRDV1A0A1B0GX56 115 aa4.73□□□□□ -1.65
PRPF40A-210ENST00000489741 TMEM213A2RRL7 107 aa4.73□□□□□ -1.65
PRPF40A-210ENST00000489741 ERICH4A6NGS2 130 aa4.73□□□□□ -1.65
PRPF40A-210ENST00000489741 HMX3A6NHT5 357 aa4.73□□□□□ -1.65
PRPF40A-210ENST00000489741 PPP5D1E7EU14 171 aa4.73□□□□□ -1.65
PRPF40A-210ENST00000489741 PDCD5O14737 125 aa4.73□□□□□ -1.65
PRPF40A-210ENST00000489741 FCGR3BO75015 233 aa4.73□□□□□ -1.65
PRPF40A-210ENST00000489741 OR2J3O76001 311 aa4.73□□□□□ -1.65
PRPF40A-210ENST00000489741 SLC22A5O76082 557 aa4.73□□□□□ -1.65
PRPF40A-210ENST00000489741 HLA-AP01891 365 aaKnown RBP4.73□□□□□ -1.65
PRPF40A-210ENST00000489741 CTXN2P0C2S0 81 aa4.73□□□□□ -1.65
PRPF40A-210ENST00000489741 C8orf88P0DMB2 117 aa4.73□□□□□ -1.65
PRPF40A-210ENST00000489741 CTRB1P17538 263 aa4.73□□□□□ -1.65
PRPF40A-210ENST00000489741 GALP22466 123 aa4.73□□□□□ -1.65
PRPF40A-210ENST00000489741 CBLN1P23435 193 aa4.73□□□□□ -1.65
PRPF40A-210ENST00000489741 GADD45AP24522 165 aa4.73□□□□□ -1.65
PRPF40A-210ENST00000489741 MAS1LP35410 378 aa4.73□□□□□ -1.65
PRPF40A-210ENST00000489741 AQP4P55087 323 aa4.73□□□□□ -1.65
PRPF40A-210ENST00000489741 MRPS15P82914 257 aaKnown RBP4.73□□□□□ -1.65
PRPF40A-210ENST00000489741 TBCEQ15813 527 aaPredicted RBP4.73□□□□□ -1.65
PRPF40A-210ENST00000489741 CDNFQ49AH0 187 aa4.73□□□□□ -1.65
PRPF40A-210ENST00000489741 HACD4Q5VWC8 232 aa4.73□□□□□ -1.65
PRPF40A-210ENST00000489741 CTRB2Q6GPI1 263 aa4.73□□□□□ -1.65
PRPF40A-210ENST00000489741 DGAT2L7PQ6IED9 249 aa4.73□□□□□ -1.65
PRPF40A-210ENST00000489741 C19orf35Q6ZS72 473 aa4.73□□□□□ -1.65
PRPF40A-210ENST00000489741 VKORC1L1Q8N0U8 176 aa4.73□□□□□ -1.65
PRPF40A-210ENST00000489741 NUDCD2Q8WVJ2 157 aa4.73□□□□□ -1.65
PRPF40A-210ENST00000489741 ACOT12Q8WYK0 555 aa4.73□□□□□ -1.65
PRPF40A-210ENST00000489741 OR2A7Q96R45 310 aa4.73□□□□□ -1.65
PRPF40A-210ENST00000489741 GINS4Q9BRT9 223 aa4.73□□□□□ -1.65
PRPF40A-210ENST00000489741 DCSTAMPQ9H295 470 aa4.73□□□□□ -1.65
PRPF40A-210ENST00000489741 VCXQ9H320 206 aa4.73□□□□□ -1.65
PRPF40A-210ENST00000489741 SRD5A3Q9H8P0 318 aa4.73□□□□□ -1.65
PRPF40A-210ENST00000489741 SLC2A8Q9NY64 477 aa4.73□□□□□ -1.65
PRPF40A-210ENST00000489741 ZNF257Q9Y2Q1 563 aa4.73□□□□□ -1.65
PRPF40A-210ENST00000489741 RBMX2Q9Y388 322 aaKnown RBP4.73□□□□□ -1.65
PRPF40A-210ENST00000489741 OR2W1Q9Y3N9 320 aa4.73□□□□□ -1.65
PRPF40A-210ENST00000489741 RBM7Q9Y580 266 aaKnown RBP4.73□□□□□ -1.65
PRPF40A-210ENST00000489741 METTL21EPA6NDL7 271 aa4.72□□□□□ -1.65
PRPF40A-210ENST00000489741 A8MWP6 167 aa4.72□□□□□ -1.65
PRPF40A-210ENST00000489741 SSX5O60225 188 aa4.72□□□□□ -1.65
PRPF40A-210ENST00000489741 CREBL2O60519 120 aaPredicted RBP4.72□□□□□ -1.65
PRPF40A-210ENST00000489741 KBTBD11O94819 623 aa4.72□□□□□ -1.65
PRPF40A-210ENST00000489741 AREGP15514 252 aa4.72□□□□□ -1.65
PRPF40A-210ENST00000489741 RAB3BP20337 219 aa4.72□□□□□ -1.65
PRPF40A-210ENST00000489741 NFYAP23511 347 aaPredicted RBP4.72□□□□□ -1.65
PRPF40A-210ENST00000489741 PSMB6P28072 239 aa4.72□□□□□ -1.65
PRPF40A-210ENST00000489741 TALDO1P37837 337 aa4.72□□□□□ -1.65
PRPF40A-210ENST00000489741 ARFRP1Q13795 201 aa4.72□□□□□ -1.65
PRPF40A-210ENST00000489741 ARL6IP1Q15041 203 aa4.72□□□□□ -1.65
PRPF40A-210ENST00000489741 MSMO1Q15800 293 aa4.72□□□□□ -1.65
PRPF40A-210ENST00000489741 ZNF57Q68EA5 555 aaPredicted RBP4.72□□□□□ -1.65
PRPF40A-210ENST00000489741 CNIH2Q6PI25 160 aa4.72□□□□□ -1.65
PRPF40A-210ENST00000489741 ZNF773Q6PK81 442 aa4.72□□□□□ -1.65
PRPF40A-210ENST00000489741 TMEM61Q8N0U2 210 aa4.72□□□□□ -1.65
PRPF40A-210ENST00000489741 UXS1Q8NBZ7 420 aa4.72□□□□□ -1.65
PRPF40A-210ENST00000489741 VSTM2AQ8TAG5 236 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 129.1 ms