RNA–Protein interactions for RNA: ENST00000488801.5

PTCD3-217, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-217ENST00000488801 AARDQ4LEZ3 155 aa14.42□□□□□ -0.1
PTCD3-217ENST00000488801 SAMD5Q5TGI4 173 aa14.42□□□□□ -0.1
PTCD3-217ENST00000488801 C19orf35Q6ZS72 473 aa14.42□□□□□ -0.1
PTCD3-217ENST00000488801 H2BFWTQ7Z2G1 175 aa14.42□□□□□ -0.1
PTCD3-217ENST00000488801 ZNF429Q86V71 674 aa14.42□□□□□ -0.1
PTCD3-217ENST00000488801 OR1L8Q8NGR8 309 aa14.42□□□□□ -0.1
PTCD3-217ENST00000488801 S100ZQ8WXG8 99 aa14.42□□□□□ -0.1
PTCD3-217ENST00000488801 FANCD2OSQ96PS1 177 aa14.42□□□□□ -0.1
PTCD3-217ENST00000488801 DUX3Q96PT4 197 aa14.42□□□□□ -0.1
PTCD3-217ENST00000488801 FYTTD1Q96QD9 318 aaKnown RBP14.42□□□□□ -0.1
PTCD3-217ENST00000488801 PLA2G10O15496 165 aa14.41□□□□□ -0.1
PTCD3-217ENST00000488801 WT1-ASQ06250 92 aa14.41□□□□□ -0.1
PTCD3-217ENST00000488801 SGPP2Q8IWX5 399 aa14.41□□□□□ -0.1
PTCD3-217ENST00000488801 SELENOHQ8IZQ5 122 aaKnown RBP14.41□□□□□ -0.1
PTCD3-217ENST00000488801 RBPMSQ93062 196 aaKnown RBP14.41□□□□□ -0.1
PTCD3-217ENST00000488801 IL22RA2Q969J5 263 aa14.41□□□□□ -0.1
PTCD3-217ENST00000488801 ALX4Q9H161 411 aaPredicted RBP14.41□□□□□ -0.1
PTCD3-217ENST00000488801 FKBP11Q9NYL4 201 aa14.41□□□□□ -0.1
PTCD3-217ENST00000488801 OR51B2Q9Y5P1 312 aa14.41□□□□□ -0.1
PTCD3-217ENST00000488801 SORL1Q92673 2214 aa14.41□□□□□ -0.1
PTCD3-217ENST00000488801 FAM223BA6NKX1 122 aa14.4□□□□□ -0.1
PTCD3-217ENST00000488801 SNAPC5O75971 98 aa14.4□□□□□ -0.1
PTCD3-217ENST00000488801 ATG12O94817 140 aa14.4□□□□□ -0.1
PTCD3-217ENST00000488801 NDUFB6O95139 128 aa14.4□□□□□ -0.1
PTCD3-217ENST00000488801 CCR6P51684 374 aa14.4□□□□□ -0.1
PTCD3-217ENST00000488801 AKR1C2P52895 323 aa14.4□□□□□ -0.1
PTCD3-217ENST00000488801 DEFA5Q01523 94 aa14.4□□□□□ -0.1
PTCD3-217ENST00000488801 IZUMO4Q1ZYL8 232 aa14.4□□□□□ -0.1
PTCD3-217ENST00000488801 TRIM16LQ309B1 348 aa14.4□□□□□ -0.1
PTCD3-217ENST00000488801 HSD17B13Q7Z5P4 300 aaPredicted RBP14.4□□□□□ -0.1
PTCD3-217ENST00000488801 FAM223AQ8IWN6 122 aa14.4□□□□□ -0.1
PTCD3-217ENST00000488801 OR11H1Q8NG94 326 aa14.4□□□□□ -0.1
PTCD3-217ENST00000488801 OR10W1Q8NGF6 305 aa14.4□□□□□ -0.1
PTCD3-217ENST00000488801 USMG5Q96IX5 58 aa14.4□□□□□ -0.1
PTCD3-217ENST00000488801 DMRT1Q9Y5R6 373 aa14.4□□□□□ -0.1
PTCD3-217ENST00000488801 IGLV11-55A0A075B6I3 123 aa14.39□□□□□ -0.11
PTCD3-217ENST00000488801 A0A0B4J293 547 aa14.39□□□□□ -0.11
PTCD3-217ENST00000488801 A0A0G2JLM5 398 aa14.39□□□□□ -0.11
PTCD3-217ENST00000488801 IGHV3-11P01762 117 aa14.39□□□□□ -0.11
PTCD3-217ENST00000488801 PRH1P02810 166 aa14.39□□□□□ -0.11
PTCD3-217ENST00000488801 TRAPPC2P0DI81 140 aa14.39□□□□□ -0.11
PTCD3-217ENST00000488801 TRAPPC2BP0DI82 140 aa14.39□□□□□ -0.11
PTCD3-217ENST00000488801 INPP1P49441 399 aa14.39□□□□□ -0.11
PTCD3-217ENST00000488801 RHOGP84095 191 aa14.39□□□□□ -0.11
PTCD3-217ENST00000488801 PRCDQ00LT1 54 aa14.39□□□□□ -0.11
PTCD3-217ENST00000488801 ZNF616Q08AN1 781 aa14.39□□□□□ -0.11
PTCD3-217ENST00000488801 TMEM128Q5BJH2 165 aa14.39□□□□□ -0.11
PTCD3-217ENST00000488801 KPRPQ5T749 579 aaPredicted RBP14.39□□□□□ -0.11
PTCD3-217ENST00000488801 ZNF343Q6P1L6 599 aa14.39□□□□□ -0.11
PTCD3-217ENST00000488801 FAM219AQ8IW50 185 aa14.39□□□□□ -0.11
PTCD3-217ENST00000488801 NECAP1Q8NC96 275 aa14.39□□□□□ -0.11
PTCD3-217ENST00000488801 LSM10Q969L4 123 aaKnown RBP14.39□□□□□ -0.11
PTCD3-217ENST00000488801 OR5B12Q96R08 314 aa14.39□□□□□ -0.11
PTCD3-217ENST00000488801 ZNF355PQ9NSJ1 428 aa14.39□□□□□ -0.11
PTCD3-217ENST00000488801 AKR1C4P17516 323 aa14.38□□□□□ -0.11
PTCD3-217ENST00000488801 CD33P20138 364 aa14.38□□□□□ -0.11
PTCD3-217ENST00000488801 UBE2MP61081 183 aaKnown RBP14.38□□□□□ -0.11
PTCD3-217ENST00000488801 Q6ZRM9 215 aa14.38□□□□□ -0.11
PTCD3-217ENST00000488801 OR4A16Q8NH70 328 aa14.38□□□□□ -0.11
PTCD3-217ENST00000488801 RCC1LQ96I51 464 aaKnown RBP14.38□□□□□ -0.11
PTCD3-217ENST00000488801 WDR12Q9GZL7 423 aaKnown RBP14.38□□□□□ -0.11
PTCD3-217ENST00000488801 IGHV4OR15-8A0A075B7B6 117 aa14.37□□□□□ -0.11
PTCD3-217ENST00000488801 A0A087WW49 117 aa14.37□□□□□ -0.11
PTCD3-217ENST00000488801 INS-IGF2F8WCM5 200 aa14.37□□□□□ -0.11
PTCD3-217ENST00000488801 LYRM1O43325 122 aa14.37□□□□□ -0.11
PTCD3-217ENST00000488801 WIPF1O43516 503 aa14.37□□□□□ -0.11
PTCD3-217ENST00000488801 REG1AP05451 166 aa14.37□□□□□ -0.11
PTCD3-217ENST00000488801 OR8U8P0C7N1 319 aa14.37□□□□□ -0.11
PTCD3-217ENST00000488801 NMSQ5H8A3 153 aa14.37□□□□□ -0.11
PTCD3-217ENST00000488801 TMEM268Q5VZI3 342 aa14.37□□□□□ -0.11
PTCD3-217ENST00000488801 CENPSQ8N2Z9 138 aa14.37□□□□□ -0.11
PTCD3-217ENST00000488801 LRTM2Q8N967 370 aa14.37□□□□□ -0.11
PTCD3-217ENST00000488801 ZNF114Q8NC26 417 aa14.37□□□□□ -0.11
PTCD3-217ENST00000488801 OR1N2Q8NGR9 330 aa14.37□□□□□ -0.11
PTCD3-217ENST00000488801 PRR13Q9NZ81 148 aa14.37□□□□□ -0.11
PTCD3-217ENST00000488801 KCNIP3Q9Y2W7 256 aa14.37□□□□□ -0.11
PTCD3-217ENST00000488801 A0A0B4J2A0 478 aa14.36□□□□□ -0.11
PTCD3-217ENST00000488801 C13orf42A0A1B0GVH6 325 aa14.36□□□□□ -0.11
PTCD3-217ENST00000488801 CENPXA8MT69 81 aa14.36□□□□□ -0.11
PTCD3-217ENST00000488801 G3V4G9 280 aa14.36□□□□□ -0.11
PTCD3-217ENST00000488801 HSPB1P04792 205 aaKnown RBP14.36□□□□□ -0.11
PTCD3-217ENST00000488801 MFAP2P55001 183 aa14.36□□□□□ -0.11
PTCD3-217ENST00000488801 HSPE1P61604 102 aaKnown RBP14.36□□□□□ -0.11
PTCD3-217ENST00000488801 BEAN1Q3B7T3 259 aa14.36□□□□□ -0.11
PTCD3-217ENST00000488801 PDLIM3Q53GG5 364 aaPredicted RBP14.36□□□□□ -0.11
PTCD3-217ENST00000488801 TMED4Q7Z7H5 227 aa14.36□□□□□ -0.11
PTCD3-217ENST00000488801 SLC35G3Q8N808 338 aa14.36□□□□□ -0.11
PTCD3-217ENST00000488801 SHPKQ9UHJ6 478 aa14.36□□□□□ -0.11
PTCD3-217ENST00000488801 TBC1D24Q9ULP9 559 aa14.36□□□□□ -0.11
PTCD3-217ENST00000488801 LINC00854A0A1B0GVQ3 168 aa14.35□□□□□ -0.11
PTCD3-217ENST00000488801 LINC01619G3V211 115 aa14.35□□□□□ -0.11
PTCD3-217ENST00000488801 ST8SIA3O43173 380 aa14.35□□□□□ -0.11
PTCD3-217ENST00000488801 OR2J3O76001 311 aa14.35□□□□□ -0.11
PTCD3-217ENST00000488801 DUS4LO95620 317 aaKnown RBP14.35□□□□□ -0.11
PTCD3-217ENST00000488801 DHFRP00374 187 aa14.35□□□□□ -0.11
PTCD3-217ENST00000488801 OR13C7P0DN81 318 aa14.35□□□□□ -0.11
PTCD3-217ENST00000488801 HIST1H1BP16401 226 aaKnown RBP14.35□□□□□ -0.11
PTCD3-217ENST00000488801 SRPXP78539 464 aa14.35□□□□□ -0.11
PTCD3-217ENST00000488801 PPP1R1AQ13522 171 aa14.35□□□□□ -0.11
PTCD3-217ENST00000488801 EXOSC2Q13868 293 aaKnown RBP14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms