RNA–Protein interactions for RNA: ENST00000483546.1

RPP40-206, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 3

Gene RPP40, Length 654 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-206ENST00000483546 APELAP0DMC3 54 aa12.1□□□□□ -0.47
RPP40-206ENST00000483546 ANXA3P12429 323 aa12.1□□□□□ -0.47
RPP40-206ENST00000483546 IL7P13232 177 aa12.1□□□□□ -0.47
RPP40-206ENST00000483546 HIST1H1BP16401 226 aaKnown RBP12.1□□□□□ -0.47
RPP40-206ENST00000483546 ZNF616Q08AN1 781 aa12.1□□□□□ -0.47
RPP40-206ENST00000483546 RBMS2Q15434 407 aaKnown RBP12.1□□□□□ -0.47
RPP40-206ENST00000483546 ZNF429Q86V71 674 aa12.1□□□□□ -0.47
RPP40-206ENST00000483546 NECAP1Q8NC96 275 aa12.1□□□□□ -0.47
RPP40-206ENST00000483546 OR11H1Q8NG94 326 aa12.1□□□□□ -0.47
RPP40-206ENST00000483546 OR1N2Q8NGR9 330 aa12.1□□□□□ -0.47
RPP40-206ENST00000483546 OR4A16Q8NH70 328 aa12.1□□□□□ -0.47
RPP40-206ENST00000483546 CASTOR1Q8WTX7 329 aa12.1□□□□□ -0.47
RPP40-206ENST00000483546 GLYATL2Q8WU03 294 aa12.1□□□□□ -0.47
RPP40-206ENST00000483546 DPF1Q92782 380 aa12.1□□□□□ -0.47
RPP40-206ENST00000483546 IL22RA2Q969J5 263 aa12.1□□□□□ -0.47
RPP40-206ENST00000483546 RRNAD1Q96FB5 475 aaKnown RBP12.1□□□□□ -0.47
RPP40-206ENST00000483546 TMEM56Q96MV1 263 aa12.1□□□□□ -0.47
RPP40-206ENST00000483546 NDUFA4L2Q9NRX3 87 aa12.1□□□□□ -0.47
RPP40-206ENST00000483546 OR51B2Q9Y5P1 312 aa12.1□□□□□ -0.47
RPP40-206ENST00000483546 TEX50A0A1B0GTY4 177 aa12.09□□□□□ -0.47
RPP40-206ENST00000483546 A0A1B0GW64 132 aa12.09□□□□□ -0.47
RPP40-206ENST00000483546 IGLC7A0M8Q6 106 aa12.09□□□□□ -0.47
RPP40-206ENST00000483546 CGB1A6NKQ9 187 aa12.09□□□□□ -0.47
RPP40-206ENST00000483546 CTRB1P17538 263 aa12.09□□□□□ -0.47
RPP40-206ENST00000483546 SRPXP78539 464 aa12.09□□□□□ -0.47
RPP40-206ENST00000483546 DEFB136Q30KP8 78 aa12.09□□□□□ -0.47
RPP40-206ENST00000483546 SP6Q3SY56 376 aa12.09□□□□□ -0.47
RPP40-206ENST00000483546 TMEM128Q5BJH2 165 aa12.09□□□□□ -0.47
RPP40-206ENST00000483546 CTRB2Q6GPI1 263 aa12.09□□□□□ -0.47
RPP40-206ENST00000483546 RBPMSQ93062 196 aaKnown RBP12.09□□□□□ -0.47
RPP40-206ENST00000483546 LSM10Q969L4 123 aaKnown RBP12.09□□□□□ -0.47
RPP40-206ENST00000483546 NOTCH3Q9UM47 2321 aa12.08□□□□□ -0.48
RPP40-206ENST00000483546 IGKV1-5P01602 117 aa12.08□□□□□ -0.48
RPP40-206ENST00000483546 HSPB1P04792 205 aaKnown RBP12.08□□□□□ -0.48
RPP40-206ENST00000483546 P0C879 139 aa12.08□□□□□ -0.48
RPP40-206ENST00000483546 MYOD1P15172 320 aa12.08□□□□□ -0.48
RPP40-206ENST00000483546 AREGP15514 252 aa12.08□□□□□ -0.48
RPP40-206ENST00000483546 RHOGP84095 191 aa12.08□□□□□ -0.48
RPP40-206ENST00000483546 SAMD5Q5TGI4 173 aa12.08□□□□□ -0.48
RPP40-206ENST00000483546 RNASE11Q8TAA1 199 aaKnown RBP12.08□□□□□ -0.48
RPP40-206ENST00000483546 TMEM230Q96A57 120 aa12.08□□□□□ -0.48
RPP40-206ENST00000483546 RANGRFQ9HD47 186 aaPredicted RBP12.08□□□□□ -0.48
RPP40-206ENST00000483546 THYN1Q9P016 225 aa12.08□□□□□ -0.48
RPP40-206ENST00000483546 CACFD1Q9UGQ2 172 aa12.08□□□□□ -0.48
RPP40-206ENST00000483546 TMEM56-RWDD3S4R434 201 aa12.08□□□□□ -0.48
RPP40-206ENST00000483546 CMYA5Q8N3K9 4069 aa12.07□□□□□ -0.48
RPP40-206ENST00000483546 LINC01619G3V211 115 aa12.07□□□□□ -0.48
RPP40-206ENST00000483546 RBMXL2O75526 392 aaKnown RBP12.07□□□□□ -0.48
RPP40-206ENST00000483546 DEFA4P12838 97 aa12.07□□□□□ -0.48
RPP40-206ENST00000483546 AKR1C4P17516 323 aa12.07□□□□□ -0.48
RPP40-206ENST00000483546 UBE2MP61081 183 aaKnown RBP12.07□□□□□ -0.48
RPP40-206ENST00000483546 HSPE1P61604 102 aaKnown RBP12.07□□□□□ -0.48
RPP40-206ENST00000483546 ATP5G2Q06055 141 aa12.07□□□□□ -0.48
RPP40-206ENST00000483546 ZNF343Q6P1L6 599 aa12.07□□□□□ -0.48
RPP40-206ENST00000483546 OR1L6Q8NGR2 347 aa12.07□□□□□ -0.48
RPP40-206ENST00000483546 DUX3Q96PT4 197 aa12.07□□□□□ -0.48
RPP40-206ENST00000483546 OR5B12Q96R08 314 aa12.07□□□□□ -0.48
RPP40-206ENST00000483546 WDR12Q9GZL7 423 aaKnown RBP12.07□□□□□ -0.48
RPP40-206ENST00000483546 NSG2Q9Y328 171 aa12.07□□□□□ -0.48
RPP40-206ENST00000483546 NDUFB6O95139 128 aa12.06□□□□□ -0.48
RPP40-206ENST00000483546 IGHV3-11P01762 117 aa12.06□□□□□ -0.48
RPP40-206ENST00000483546 ZP3P21754 424 aa12.06□□□□□ -0.48
RPP40-206ENST00000483546 PRCDQ00LT1 54 aa12.06□□□□□ -0.48
RPP40-206ENST00000483546 TMEM187Q14656 261 aa12.06□□□□□ -0.48
RPP40-206ENST00000483546 KPRPQ5T749 579 aaPredicted RBP12.06□□□□□ -0.48
RPP40-206ENST00000483546 TMEM268Q5VZI3 342 aa12.06□□□□□ -0.48
RPP40-206ENST00000483546 TMED4Q7Z7H5 227 aa12.06□□□□□ -0.48
RPP40-206ENST00000483546 SELENOHQ8IZQ5 122 aaKnown RBP12.06□□□□□ -0.48
RPP40-206ENST00000483546 CENPSQ8N2Z9 138 aa12.06□□□□□ -0.48
RPP40-206ENST00000483546 PDCD10Q9BUL8 212 aa12.06□□□□□ -0.48
RPP40-206ENST00000483546 IGLV11-55A0A075B6I3 123 aa12.05□□□□□ -0.48
RPP40-206ENST00000483546 A0A0B4J2A0 478 aa12.05□□□□□ -0.48
RPP40-206ENST00000483546 DUXBA0A1W2PPF3 345 aa12.05□□□□□ -0.48
RPP40-206ENST00000483546 OR13C7P0DN81 318 aa12.05□□□□□ -0.48
RPP40-206ENST00000483546 RAB25P57735 213 aa12.05□□□□□ -0.48
RPP40-206ENST00000483546 SUPT4H1P63272 117 aaKnown RBP12.05□□□□□ -0.48
RPP40-206ENST00000483546 WT1-ASQ06250 92 aa12.05□□□□□ -0.48
RPP40-206ENST00000483546 C15orf32Q32M92 178 aa12.05□□□□□ -0.48
RPP40-206ENST00000483546 AARDQ4LEZ3 155 aa12.05□□□□□ -0.48
RPP40-206ENST00000483546 LGI3Q8N145 548 aa12.05□□□□□ -0.48
RPP40-206ENST00000483546 OR10W1Q8NGF6 305 aa12.05□□□□□ -0.48
RPP40-206ENST00000483546 LHFPL5Q8TAF8 219 aa12.05□□□□□ -0.48
RPP40-206ENST00000483546 CXorf58Q96LI9 332 aa12.05□□□□□ -0.48
RPP40-206ENST00000483546 FANCD2OSQ96PS1 177 aa12.05□□□□□ -0.48
RPP40-206ENST00000483546 HINT2Q9BX68 163 aa12.05□□□□□ -0.48
RPP40-206ENST00000483546 PEF1Q9UBV8 284 aaKnown RBP12.05□□□□□ -0.48
RPP40-206ENST00000483546 SHPKQ9UHJ6 478 aa12.05□□□□□ -0.48
RPP40-206ENST00000483546 IGHV4OR15-8A0A075B7B6 117 aa12.04□□□□□ -0.48
RPP40-206ENST00000483546 A0A087WW49 117 aa12.04□□□□□ -0.48
RPP40-206ENST00000483546 A0A0B4J293 547 aa12.04□□□□□ -0.48
RPP40-206ENST00000483546 DBX1A6NMT0 343 aa12.04□□□□□ -0.48
RPP40-206ENST00000483546 INS-IGF2F8WCM5 200 aa12.04□□□□□ -0.48
RPP40-206ENST00000483546 OR2J3O76001 311 aa12.04□□□□□ -0.48
RPP40-206ENST00000483546 PRH1P02810 166 aa12.04□□□□□ -0.48
RPP40-206ENST00000483546 MECP2P51608 486 aaKnown RBP12.04□□□□□ -0.48
RPP40-206ENST00000483546 CCR6P51684 374 aa12.04□□□□□ -0.48
RPP40-206ENST00000483546 EXOSC2Q13868 293 aaKnown RBP12.04□□□□□ -0.48
RPP40-206ENST00000483546 ZNF846Q147U1 533 aa12.04□□□□□ -0.48
RPP40-206ENST00000483546 ZNF114Q8NC26 417 aa12.04□□□□□ -0.48
RPP40-206ENST00000483546 OR52E5Q8NH55 327 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms