RNA–Protein interactions for RNA: ENST00000481508.1

SSBP1-210, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 989 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-210ENST00000481508 TRIM16LQ309B1 348 aa8.17□□□□□ -1.1
SSBP1-210ENST00000481508 TRIQKQ629K1 86 aa8.17□□□□□ -1.1
SSBP1-210ENST00000481508 GLYATL2Q8WU03 294 aa8.17□□□□□ -1.1
SSBP1-210ENST00000481508 QTRT1Q9BXR0 403 aaKnown RBP8.17□□□□□ -1.1
SSBP1-210ENST00000481508 PTTG2Q9NZH5 202 aa8.17□□□□□ -1.1
SSBP1-210ENST00000481508 DMRT1Q9Y5R6 373 aa8.17□□□□□ -1.1
SSBP1-210ENST00000481508 IGHV4OR15-8A0A075B7B6 117 aa8.16□□□□□ -1.1
SSBP1-210ENST00000481508 A0A087WW49 117 aa8.16□□□□□ -1.1
SSBP1-210ENST00000481508 TRBV9A0A0B4J1U6 114 aa8.16□□□□□ -1.1
SSBP1-210ENST00000481508 TEX13DA0A0J9YY54 714 aaPredicted RBP8.16□□□□□ -1.1
SSBP1-210ENST00000481508 C15orf61A6NNL5 157 aa8.16□□□□□ -1.1
SSBP1-210ENST00000481508 H3BUA1 57 aa8.16□□□□□ -1.1
SSBP1-210ENST00000481508 PRB2P02812 416 aaPredicted RBP8.16□□□□□ -1.1
SSBP1-210ENST00000481508 SERPINE2P07093 398 aa8.16□□□□□ -1.1
SSBP1-210ENST00000481508 IGLL1P15814 213 aa8.16□□□□□ -1.1
SSBP1-210ENST00000481508 AKR1C4P17516 323 aa8.16□□□□□ -1.1
SSBP1-210ENST00000481508 CTRB1P17538 263 aa8.16□□□□□ -1.1
SSBP1-210ENST00000481508 PSMB6P28072 239 aa8.16□□□□□ -1.1
SSBP1-210ENST00000481508 FAUP35544 74 aaKnown RBP8.16□□□□□ -1.1
SSBP1-210ENST00000481508 MYCNOSP40205 109 aa8.16□□□□□ -1.1
SSBP1-210ENST00000481508 SLURP1P55000 103 aa8.16□□□□□ -1.1
SSBP1-210ENST00000481508 RUNX1Q01196 453 aa8.16□□□□□ -1.1
SSBP1-210ENST00000481508 WT1-ASQ06250 92 aa8.16□□□□□ -1.1
SSBP1-210ENST00000481508 TMEM187Q14656 261 aa8.16□□□□□ -1.1
SSBP1-210ENST00000481508 SPINK9Q5DT21 86 aa8.16□□□□□ -1.1
SSBP1-210ENST00000481508 SAMD5Q5TGI4 173 aa8.16□□□□□ -1.1
SSBP1-210ENST00000481508 CTRB2Q6GPI1 263 aa8.16□□□□□ -1.1
SSBP1-210ENST00000481508 Q6ZRM9 215 aa8.16□□□□□ -1.1
SSBP1-210ENST00000481508 H2BFWTQ7Z2G1 175 aa8.16□□□□□ -1.1
SSBP1-210ENST00000481508 TMED4Q7Z7H5 227 aa8.16□□□□□ -1.1
SSBP1-210ENST00000481508 SELENOHQ8IZQ5 122 aaKnown RBP8.16□□□□□ -1.1
SSBP1-210ENST00000481508 DYNC2H1Q8NCM8 4307 aaKnown RBP8.16□□□□□ -1.1
SSBP1-210ENST00000481508 WFDC9Q8NEX5 89 aa8.16□□□□□ -1.1
SSBP1-210ENST00000481508 OR11H1Q8NG94 326 aa8.16□□□□□ -1.1
SSBP1-210ENST00000481508 TMEM68Q96MH6 324 aa8.16□□□□□ -1.1
SSBP1-210ENST00000481508 FANCD2OSQ96PS1 177 aa8.16□□□□□ -1.1
SSBP1-210ENST00000481508 SPIN2AQ99865 258 aa8.16□□□□□ -1.1
SSBP1-210ENST00000481508 SPIN2BQ9BPZ2 258 aa8.16□□□□□ -1.1
SSBP1-210ENST00000481508 AIFM2Q9BRQ8 373 aa8.16□□□□□ -1.1
SSBP1-210ENST00000481508 TMEM222Q9H0R3 208 aa8.16□□□□□ -1.1
SSBP1-210ENST00000481508 BATF3Q9NR55 127 aa8.16□□□□□ -1.1
SSBP1-210ENST00000481508 NDUFA4L2Q9NRX3 87 aa8.16□□□□□ -1.1
SSBP1-210ENST00000481508 TMEM14BQ9NUH8 114 aa8.16□□□□□ -1.1
SSBP1-210ENST00000481508 FLVCR2Q9UPI3 526 aa8.16□□□□□ -1.1
SSBP1-210ENST00000481508 OR51B2Q9Y5P1 312 aa8.16□□□□□ -1.1
SSBP1-210ENST00000481508 A0A0B4J293 547 aa8.15□□□□□ -1.1
SSBP1-210ENST00000481508 ANKRD34BA5PLL1 514 aa8.15□□□□□ -1.1
SSBP1-210ENST00000481508 NPIPB5A8MRT5 1133 aa8.15□□□□□ -1.1
SSBP1-210ENST00000481508 OR2J3O76001 311 aa8.15□□□□□ -1.1
SSBP1-210ENST00000481508 NDUFB8O95169 186 aa8.15□□□□□ -1.1
SSBP1-210ENST00000481508 BRI3O95415 125 aa8.15□□□□□ -1.1
SSBP1-210ENST00000481508 CDS2O95674 445 aa8.15□□□□□ -1.1
SSBP1-210ENST00000481508 CRYGCP07315 174 aa8.15□□□□□ -1.1
SSBP1-210ENST00000481508 CD40LGP29965 261 aa8.15□□□□□ -1.1
SSBP1-210ENST00000481508 MFAP2P55001 183 aa8.15□□□□□ -1.1
SSBP1-210ENST00000481508 RAB25P57735 213 aa8.15□□□□□ -1.1
SSBP1-210ENST00000481508 RHOGP84095 191 aa8.15□□□□□ -1.1
SSBP1-210ENST00000481508 C11orf87Q6NUJ2 197 aa8.15□□□□□ -1.1
SSBP1-210ENST00000481508 CADM3Q8N126 398 aa8.15□□□□□ -1.1
SSBP1-210ENST00000481508 OR1N2Q8NGR9 330 aa8.15□□□□□ -1.1
SSBP1-210ENST00000481508 HINT2Q9BX68 163 aa8.15□□□□□ -1.1
SSBP1-210ENST00000481508 COMMD5Q9GZQ3 224 aa8.15□□□□□ -1.1
SSBP1-210ENST00000481508 SLA2Q9H6Q3 261 aa8.15□□□□□ -1.1
SSBP1-210ENST00000481508 S4R3C0 116 aa8.15□□□□□ -1.1
SSBP1-210ENST00000481508 SNAPC5O75971 98 aa8.14□□□□□ -1.11
SSBP1-210ENST00000481508 NDUFB6O95139 128 aa8.14□□□□□ -1.11
SSBP1-210ENST00000481508 IGHV3-23P01764 117 aa8.14□□□□□ -1.11
SSBP1-210ENST00000481508 FGF2P09038 288 aa8.14□□□□□ -1.11
SSBP1-210ENST00000481508 TRAPPC2P0DI81 140 aa8.14□□□□□ -1.11
SSBP1-210ENST00000481508 TRAPPC2BP0DI82 140 aa8.14□□□□□ -1.11
SSBP1-210ENST00000481508 CD33P20138 364 aa8.14□□□□□ -1.11
SSBP1-210ENST00000481508 SLC6A1P30531 599 aa8.14□□□□□ -1.11
SSBP1-210ENST00000481508 INPP1P49441 399 aa8.14□□□□□ -1.11
SSBP1-210ENST00000481508 AKR1C2P52895 323 aa8.14□□□□□ -1.11
SSBP1-210ENST00000481508 IFITM3Q01628 133 aa8.14□□□□□ -1.11
SSBP1-210ENST00000481508 KLK9Q2XQG4 91 aa8.14□□□□□ -1.11
SSBP1-210ENST00000481508 BEAN1Q3B7T3 259 aa8.14□□□□□ -1.11
SSBP1-210ENST00000481508 ANKRD55Q3KP44 614 aa8.14□□□□□ -1.11
SSBP1-210ENST00000481508 TMEM268Q5VZI3 342 aa8.14□□□□□ -1.11
SSBP1-210ENST00000481508 OR1L8Q8NGR8 309 aa8.14□□□□□ -1.11
SSBP1-210ENST00000481508 GPR146Q96CH1 333 aa8.14□□□□□ -1.11
SSBP1-210ENST00000481508 GALNT14Q96FL9 552 aa8.14□□□□□ -1.11
SSBP1-210ENST00000481508 KLK9Q9UKQ9 250 aa8.14□□□□□ -1.11
SSBP1-210ENST00000481508 PRNDQ9UKY0 176 aa8.14□□□□□ -1.11
SSBP1-210ENST00000481508 ZNF257Q9Y2Q1 563 aa8.14□□□□□ -1.11
SSBP1-210ENST00000481508 IGLV11-55A0A075B6I3 123 aa8.13□□□□□ -1.11
SSBP1-210ENST00000481508 C13orf42A0A1B0GVH6 325 aa8.13□□□□□ -1.11
SSBP1-210ENST00000481508 ST8SIA3O43173 380 aa8.13□□□□□ -1.11
SSBP1-210ENST00000481508 OR13C7P0DN81 318 aa8.13□□□□□ -1.11
SSBP1-210ENST00000481508 DHODHQ02127 395 aa8.13□□□□□ -1.11
SSBP1-210ENST00000481508 TNP2Q05952 138 aa8.13□□□□□ -1.11
SSBP1-210ENST00000481508 ZNF616Q08AN1 781 aa8.13□□□□□ -1.11
SSBP1-210ENST00000481508 PPP1R1AQ13522 171 aa8.13□□□□□ -1.11
SSBP1-210ENST00000481508 EXOSC2Q13868 293 aaKnown RBP8.13□□□□□ -1.11
SSBP1-210ENST00000481508 ZNF343Q6P1L6 599 aa8.13□□□□□ -1.11
SSBP1-210ENST00000481508 SGPP2Q8IWX5 399 aa8.13□□□□□ -1.11
SSBP1-210ENST00000481508 SLC35G3Q8N808 338 aa8.13□□□□□ -1.11
SSBP1-210ENST00000481508 OR5B3Q8NH48 314 aa8.13□□□□□ -1.11
SSBP1-210ENST00000481508 OR4A16Q8NH70 328 aa8.13□□□□□ -1.11
SSBP1-210ENST00000481508 DEDD2Q8WXF8 326 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms