RNA–Protein interactions for RNA: ENST00000476428.1

MAP1LC3A-204, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

TSL 5

Gene MAP1LC3A, Length 851 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-204ENST00000476428 TRAPPC2BP0DI82 140 aa16.21■□□□□ 0.19
MAP1LC3A-204ENST00000476428 CTRB1P17538 263 aa16.21■□□□□ 0.19
MAP1LC3A-204ENST00000476428 INPP1P49441 399 aa16.21■□□□□ 0.19
MAP1LC3A-204ENST00000476428 RHOGP84095 191 aa16.21■□□□□ 0.19
MAP1LC3A-204ENST00000476428 CTRB2Q6GPI1 263 aa16.21■□□□□ 0.19
MAP1LC3A-204ENST00000476428 OR10W1Q8NGF6 305 aa16.21■□□□□ 0.19
MAP1LC3A-204ENST00000476428 RCC1LQ96I51 464 aaKnown RBP16.21■□□□□ 0.19
MAP1LC3A-204ENST00000476428 SRSF8Q9BRL6 282 aaKnown RBP16.21■□□□□ 0.19
MAP1LC3A-204ENST00000476428 AKIP1Q9NQ31 210 aa16.21■□□□□ 0.19
MAP1LC3A-204ENST00000476428 NDUFA4L2Q9NRX3 87 aa16.21■□□□□ 0.19
MAP1LC3A-204ENST00000476428 FKBP11Q9NYL4 201 aa16.21■□□□□ 0.19
MAP1LC3A-204ENST00000476428 IGHV4OR15-8A0A075B7B6 117 aa16.2■□□□□ 0.18
MAP1LC3A-204ENST00000476428 A0A087WW49 117 aa16.2■□□□□ 0.18
MAP1LC3A-204ENST00000476428 C15orf61A6NNL5 157 aa16.2■□□□□ 0.18
MAP1LC3A-204ENST00000476428 HSPB1P04792 205 aaKnown RBP16.2■□□□□ 0.18
MAP1LC3A-204ENST00000476428 P0C879 139 aa16.2■□□□□ 0.18
MAP1LC3A-204ENST00000476428 DHODHQ02127 395 aa16.2■□□□□ 0.18
MAP1LC3A-204ENST00000476428 IZUMO4Q1ZYL8 232 aa16.2■□□□□ 0.18
MAP1LC3A-204ENST00000476428 SGPP2Q8IWX5 399 aa16.2■□□□□ 0.18
MAP1LC3A-204ENST00000476428 OR4A16Q8NH70 328 aa16.2■□□□□ 0.18
MAP1LC3A-204ENST00000476428 FANCD2OSQ96PS1 177 aa16.2■□□□□ 0.18
MAP1LC3A-204ENST00000476428 HINT2Q9BX68 163 aa16.2■□□□□ 0.18
MAP1LC3A-204ENST00000476428 TMEM14BQ9NUH8 114 aa16.2■□□□□ 0.18
MAP1LC3A-204ENST00000476428 LINC01619G3V211 115 aa16.19■□□□□ 0.18
MAP1LC3A-204ENST00000476428 OR2J3O76001 311 aa16.19■□□□□ 0.18
MAP1LC3A-204ENST00000476428 ATG12O94817 140 aa16.19■□□□□ 0.18
MAP1LC3A-204ENST00000476428 CDS2O95674 445 aa16.19■□□□□ 0.18
MAP1LC3A-204ENST00000476428 OR8U8P0C7N1 319 aa16.19■□□□□ 0.18
MAP1LC3A-204ENST00000476428 IL7P13232 177 aa16.19■□□□□ 0.18
MAP1LC3A-204ENST00000476428 AKR1C4P17516 323 aa16.19■□□□□ 0.18
MAP1LC3A-204ENST00000476428 ATP5G2Q06055 141 aa16.19■□□□□ 0.18
MAP1LC3A-204ENST00000476428 BEAN1Q3B7T3 259 aa16.19■□□□□ 0.18
MAP1LC3A-204ENST00000476428 THOC7Q6I9Y2 204 aaKnown RBP16.19■□□□□ 0.18
MAP1LC3A-204ENST00000476428 LINC00299Q6ZSB3 139 aa16.19■□□□□ 0.18
MAP1LC3A-204ENST00000476428 LHFPL5Q8TAF8 219 aa16.19■□□□□ 0.18
MAP1LC3A-204ENST00000476428 BATF3Q9NR55 127 aa16.19■□□□□ 0.18
MAP1LC3A-204ENST00000476428 LINC00854A0A1B0GVQ3 168 aa16.18■□□□□ 0.18
MAP1LC3A-204ENST00000476428 ANKRD34BA5PLL1 514 aa16.18■□□□□ 0.18
MAP1LC3A-204ENST00000476428 FAM223BA6NKX1 122 aa16.18■□□□□ 0.18
MAP1LC3A-204ENST00000476428 AKR1C2P52895 323 aa16.18■□□□□ 0.18
MAP1LC3A-204ENST00000476428 KLK9Q2XQG4 91 aa16.18■□□□□ 0.18
MAP1LC3A-204ENST00000476428 ZNF343Q6P1L6 599 aa16.18■□□□□ 0.18
MAP1LC3A-204ENST00000476428 FAM223AQ8IWN6 122 aa16.18■□□□□ 0.18
MAP1LC3A-204ENST00000476428 SELENOHQ8IZQ5 122 aaKnown RBP16.18■□□□□ 0.18
MAP1LC3A-204ENST00000476428 NECAP1Q8NC96 275 aa16.18■□□□□ 0.18
MAP1LC3A-204ENST00000476428 OR5B3Q8NH48 314 aa16.18■□□□□ 0.18
MAP1LC3A-204ENST00000476428 GALNT14Q96FL9 552 aa16.18■□□□□ 0.18
MAP1LC3A-204ENST00000476428 SLC25A21Q9BQT8 299 aaPredicted RBP16.18■□□□□ 0.18
MAP1LC3A-204ENST00000476428 KLK9Q9UKQ9 250 aa16.18■□□□□ 0.18
MAP1LC3A-204ENST00000476428 KCNIP3Q9Y2W7 256 aa16.18■□□□□ 0.18
MAP1LC3A-204ENST00000476428 A0A0B4J293 547 aa16.17■□□□□ 0.18
MAP1LC3A-204ENST00000476428 A0A0G2JRQ6 117 aa16.17■□□□□ 0.18
MAP1LC3A-204ENST00000476428 NAP1L6A6NFF2 107 aa16.17■□□□□ 0.18
MAP1LC3A-204ENST00000476428 DUS4LO95620 317 aaKnown RBP16.17■□□□□ 0.18
MAP1LC3A-204ENST00000476428 DHFRP00374 187 aa16.17■□□□□ 0.18
MAP1LC3A-204ENST00000476428 OR13C7P0DN81 318 aa16.17■□□□□ 0.18
MAP1LC3A-204ENST00000476428 SLURP1P55000 103 aa16.17■□□□□ 0.18
MAP1LC3A-204ENST00000476428 WT1-ASQ06250 92 aa16.17■□□□□ 0.18
MAP1LC3A-204ENST00000476428 TMEM187Q14656 261 aa16.17■□□□□ 0.18
MAP1LC3A-204ENST00000476428 KPRPQ5T749 579 aaPredicted RBP16.17■□□□□ 0.18
MAP1LC3A-204ENST00000476428 DCUN1D4Q92564 292 aa16.17■□□□□ 0.18
MAP1LC3A-204ENST00000476428 TMEM56Q96MV1 263 aa16.17■□□□□ 0.18
MAP1LC3A-204ENST00000476428 MCRIP2Q9BUT9 160 aaKnown RBP16.17■□□□□ 0.18
MAP1LC3A-204ENST00000476428 RANGRFQ9HD47 186 aaPredicted RBP16.17■□□□□ 0.18
MAP1LC3A-204ENST00000476428 FBXL7Q9UJT9 491 aa16.17■□□□□ 0.18
MAP1LC3A-204ENST00000476428 TMEM56-RWDD3S4R434 201 aa16.17■□□□□ 0.18
MAP1LC3A-204ENST00000476428 NDUFB8O95169 186 aa16.16■□□□□ 0.18
MAP1LC3A-204ENST00000476428 DEFA4P12838 97 aa16.16■□□□□ 0.18
MAP1LC3A-204ENST00000476428 CCR6P51684 374 aa16.16■□□□□ 0.18
MAP1LC3A-204ENST00000476428 HSPE1P61604 102 aaKnown RBP16.16■□□□□ 0.18
MAP1LC3A-204ENST00000476428 SUPT4H1P63272 117 aaKnown RBP16.16■□□□□ 0.18
MAP1LC3A-204ENST00000476428 HSD17B13Q7Z5P4 300 aaPredicted RBP16.16■□□□□ 0.18
MAP1LC3A-204ENST00000476428 TMED4Q7Z7H5 227 aa16.16■□□□□ 0.18
MAP1LC3A-204ENST00000476428 DLX4Q92988 240 aaPredicted RBP16.16■□□□□ 0.18
MAP1LC3A-204ENST00000476428 RBPMSQ93062 196 aaKnown RBP16.16■□□□□ 0.18
MAP1LC3A-204ENST00000476428 LSM10Q969L4 123 aaKnown RBP16.16■□□□□ 0.18
MAP1LC3A-204ENST00000476428 RRNAD1Q96FB5 475 aaKnown RBP16.16■□□□□ 0.18
MAP1LC3A-204ENST00000476428 PRR13Q9NZ81 148 aa16.16■□□□□ 0.18
MAP1LC3A-204ENST00000476428 PTTG2Q9NZH5 202 aa16.16■□□□□ 0.18
MAP1LC3A-204ENST00000476428 IGLV11-55A0A075B6I3 123 aa16.15■□□□□ 0.18
MAP1LC3A-204ENST00000476428 TRBV12-3P01733 135 aa16.15■□□□□ 0.18
MAP1LC3A-204ENST00000476428 HIST1H1BP16401 226 aaKnown RBP16.15■□□□□ 0.18
MAP1LC3A-204ENST00000476428 EXOSC2Q13868 293 aaKnown RBP16.15■□□□□ 0.18
MAP1LC3A-204ENST00000476428 C15orf32Q32M92 178 aa16.15■□□□□ 0.18
MAP1LC3A-204ENST00000476428 TMEM268Q5VZI3 342 aa16.15■□□□□ 0.18
MAP1LC3A-204ENST00000476428 Q6ZRM9 215 aa16.15■□□□□ 0.18
MAP1LC3A-204ENST00000476428 ZNF429Q86V71 674 aa16.15■□□□□ 0.18
MAP1LC3A-204ENST00000476428 RNASE11Q8TAA1 199 aaKnown RBP16.15■□□□□ 0.18
MAP1LC3A-204ENST00000476428 PEF1Q9UBV8 284 aaKnown RBP16.15■□□□□ 0.18
MAP1LC3A-204ENST00000476428 DMRT1Q9Y5R6 373 aa16.15■□□□□ 0.18
MAP1LC3A-204ENST00000476428 NOTCH3Q9UM47 2321 aa16.14■□□□□ 0.18
MAP1LC3A-204ENST00000476428 C7orf50Q9BRJ6 194 aaKnown RBP16.14■□□□□ 0.17
MAP1LC3A-204ENST00000476428 CENPXA8MT69 81 aa16.13■□□□□ 0.17
MAP1LC3A-204ENST00000476428 OVOL1O14753 267 aa16.13■□□□□ 0.17
MAP1LC3A-204ENST00000476428 PLA2G10O15496 165 aa16.13■□□□□ 0.17
MAP1LC3A-204ENST00000476428 HOXD3P31249 432 aaPredicted RBP16.13■□□□□ 0.17
MAP1LC3A-204ENST00000476428 MECP2P51608 486 aaKnown RBP16.13■□□□□ 0.17
MAP1LC3A-204ENST00000476428 PRCDQ00LT1 54 aa16.13■□□□□ 0.17
MAP1LC3A-204ENST00000476428 RBMS2Q15434 407 aaKnown RBP16.13■□□□□ 0.17
MAP1LC3A-204ENST00000476428 TMEM128Q5BJH2 165 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms