RNA–Protein interactions for RNA: ENST00000471423.1

VPS72-204, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 2

Gene VPS72, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-204ENST00000471423 TRAPPC2BP0DI82 140 aa13.72□□□□□ -0.21
VPS72-204ENST00000471423 PSMB6P28072 239 aa13.72□□□□□ -0.21
VPS72-204ENST00000471423 RAB25P57735 213 aa13.72□□□□□ -0.21
VPS72-204ENST00000471423 RHOGP84095 191 aa13.72□□□□□ -0.21
VPS72-204ENST00000471423 DHODHQ02127 395 aa13.72□□□□□ -0.21
VPS72-204ENST00000471423 FHL3Q13643 280 aa13.72□□□□□ -0.21
VPS72-204ENST00000471423 RBMS2Q15434 407 aaKnown RBP13.72□□□□□ -0.21
VPS72-204ENST00000471423 THOC7Q6I9Y2 204 aaKnown RBP13.72□□□□□ -0.21
VPS72-204ENST00000471423 WFDC9Q8NEX5 89 aa13.72□□□□□ -0.21
VPS72-204ENST00000471423 OR1L8Q8NGR8 309 aa13.72□□□□□ -0.21
VPS72-204ENST00000471423 OR1N2Q8NGR9 330 aa13.72□□□□□ -0.21
VPS72-204ENST00000471423 OR4A16Q8NH70 328 aa13.72□□□□□ -0.21
VPS72-204ENST00000471423 S100ZQ8WXG8 99 aa13.72□□□□□ -0.21
VPS72-204ENST00000471423 GALNT14Q96FL9 552 aa13.72□□□□□ -0.21
VPS72-204ENST00000471423 HINT2Q9BX68 163 aa13.72□□□□□ -0.21
VPS72-204ENST00000471423 PRR13Q9NZ81 148 aa13.72□□□□□ -0.21
VPS72-204ENST00000471423 TRBV9A0A0B4J1U6 114 aa13.71□□□□□ -0.21
VPS72-204ENST00000471423 A0A0G2JLM5 398 aa13.71□□□□□ -0.21
VPS72-204ENST00000471423 CRYGCP07315 174 aa13.71□□□□□ -0.21
VPS72-204ENST00000471423 CTRB1P17538 263 aa13.71□□□□□ -0.21
VPS72-204ENST00000471423 BTCP35070 178 aa13.71□□□□□ -0.21
VPS72-204ENST00000471423 SUPT4H1P63272 117 aaKnown RBP13.71□□□□□ -0.21
VPS72-204ENST00000471423 TMEM268Q5VZI3 342 aa13.71□□□□□ -0.21
VPS72-204ENST00000471423 CTRB2Q6GPI1 263 aa13.71□□□□□ -0.21
VPS72-204ENST00000471423 OR5B3Q8NH48 314 aa13.71□□□□□ -0.21
VPS72-204ENST00000471423 RNASE11Q8TAA1 199 aaKnown RBP13.71□□□□□ -0.21
VPS72-204ENST00000471423 RBPMSQ93062 196 aaKnown RBP13.71□□□□□ -0.21
VPS72-204ENST00000471423 C7orf50Q9BRJ6 194 aaKnown RBP13.71□□□□□ -0.21
VPS72-204ENST00000471423 SRSF8Q9BRL6 282 aaKnown RBP13.71□□□□□ -0.21
VPS72-204ENST00000471423 CCDC32Q9BV29 185 aa13.71□□□□□ -0.21
VPS72-204ENST00000471423 NDUFA4L2Q9NRX3 87 aa13.71□□□□□ -0.21
VPS72-204ENST00000471423 FKBP11Q9NYL4 201 aa13.71□□□□□ -0.21
VPS72-204ENST00000471423 KCNIP3Q9Y2W7 256 aa13.71□□□□□ -0.21
VPS72-204ENST00000471423 IGHV4OR15-8A0A075B7B6 117 aa13.7□□□□□ -0.22
VPS72-204ENST00000471423 A0A087WW49 117 aa13.7□□□□□ -0.22
VPS72-204ENST00000471423 A0A0G2JRQ6 117 aa13.7□□□□□ -0.22
VPS72-204ENST00000471423 FAM223BA6NKX1 122 aa13.7□□□□□ -0.22
VPS72-204ENST00000471423 CENPXA8MT69 81 aa13.7□□□□□ -0.22
VPS72-204ENST00000471423 G3V4G9 280 aa13.7□□□□□ -0.22
VPS72-204ENST00000471423 OR2J3O76001 311 aa13.7□□□□□ -0.22
VPS72-204ENST00000471423 IGLL1P15814 213 aa13.7□□□□□ -0.22
VPS72-204ENST00000471423 ZNF616Q08AN1 781 aa13.7□□□□□ -0.22
VPS72-204ENST00000471423 TMEM187Q14656 261 aa13.7□□□□□ -0.22
VPS72-204ENST00000471423 C1QL4Q86Z23 238 aa13.7□□□□□ -0.22
VPS72-204ENST00000471423 FAM223AQ8IWN6 122 aa13.7□□□□□ -0.22
VPS72-204ENST00000471423 SELENOHQ8IZQ5 122 aaKnown RBP13.7□□□□□ -0.22
VPS72-204ENST00000471423 LSM10Q969L4 123 aaKnown RBP13.7□□□□□ -0.22
VPS72-204ENST00000471423 RRNAD1Q96FB5 475 aaKnown RBP13.7□□□□□ -0.22
VPS72-204ENST00000471423 USMG5Q96IX5 58 aa13.7□□□□□ -0.22
VPS72-204ENST00000471423 A0A0B4J293 547 aa13.69□□□□□ -0.22
VPS72-204ENST00000471423 PLA2G10O15496 165 aa13.69□□□□□ -0.22
VPS72-204ENST00000471423 DHFRP00374 187 aa13.69□□□□□ -0.22
VPS72-204ENST00000471423 OR13C7P0DN81 318 aa13.69□□□□□ -0.22
VPS72-204ENST00000471423 ANXA3P12429 323 aa13.69□□□□□ -0.22
VPS72-204ENST00000471423 DEFA4P12838 97 aa13.69□□□□□ -0.22
VPS72-204ENST00000471423 WT1-ASQ06250 92 aa13.69□□□□□ -0.22
VPS72-204ENST00000471423 TMEM128Q5BJH2 165 aa13.69□□□□□ -0.22
VPS72-204ENST00000471423 OXLD1Q5BKU9 147 aa13.69□□□□□ -0.22
VPS72-204ENST00000471423 CENPSQ8N2Z9 138 aa13.69□□□□□ -0.22
VPS72-204ENST00000471423 NECAP1Q8NC96 275 aa13.69□□□□□ -0.22
VPS72-204ENST00000471423 DPF1Q92782 380 aa13.69□□□□□ -0.22
VPS72-204ENST00000471423 TMEM56Q96MV1 263 aa13.69□□□□□ -0.22
VPS72-204ENST00000471423 FANCD2OSQ96PS1 177 aa13.69□□□□□ -0.22
VPS72-204ENST00000471423 TMEM56-RWDD3S4R434 201 aa13.69□□□□□ -0.22
VPS72-204ENST00000471423 NOTCH3Q9UM47 2321 aa13.68□□□□□ -0.22
VPS72-204ENST00000471423 NOTCH1P46531 2555 aa13.68□□□□□ -0.22
VPS72-204ENST00000471423 ANKRD34BA5PLL1 514 aa13.68□□□□□ -0.22
VPS72-204ENST00000471423 LINC01619G3V211 115 aa13.68□□□□□ -0.22
VPS72-204ENST00000471423 NDUFB6O95139 128 aa13.68□□□□□ -0.22
VPS72-204ENST00000471423 OR8U8P0C7N1 319 aa13.68□□□□□ -0.22
VPS72-204ENST00000471423 MECP2P51608 486 aaKnown RBP13.68□□□□□ -0.22
VPS72-204ENST00000471423 EXOSC2Q13868 293 aaKnown RBP13.68□□□□□ -0.22
VPS72-204ENST00000471423 SAMD5Q5TGI4 173 aa13.68□□□□□ -0.22
VPS72-204ENST00000471423 HSD17B13Q7Z5P4 300 aaPredicted RBP13.68□□□□□ -0.22
VPS72-204ENST00000471423 ZNF429Q86V71 674 aa13.68□□□□□ -0.22
VPS72-204ENST00000471423 SLC35G3Q8N808 338 aa13.68□□□□□ -0.22
VPS72-204ENST00000471423 RCC1LQ96I51 464 aaKnown RBP13.68□□□□□ -0.22
VPS72-204ENST00000471423 WDR12Q9GZL7 423 aaKnown RBP13.68□□□□□ -0.22
VPS72-204ENST00000471423 IGLV11-55A0A075B6I3 123 aa13.67□□□□□ -0.22
VPS72-204ENST00000471423 LYRM1O43325 122 aa13.67□□□□□ -0.22
VPS72-204ENST00000471423 HSPB1P04792 205 aaKnown RBP13.67□□□□□ -0.22
VPS72-204ENST00000471423 VAMP1P23763 118 aa13.67□□□□□ -0.22
VPS72-204ENST00000471423 SLURP1P55000 103 aa13.67□□□□□ -0.22
VPS72-204ENST00000471423 HSPE1P61604 102 aaKnown RBP13.67□□□□□ -0.22
VPS72-204ENST00000471423 PRCDQ00LT1 54 aa13.67□□□□□ -0.22
VPS72-204ENST00000471423 ATP5G2Q06055 141 aa13.67□□□□□ -0.22
VPS72-204ENST00000471423 ZNF846Q147U1 533 aa13.67□□□□□ -0.22
VPS72-204ENST00000471423 C15orf32Q32M92 178 aa13.67□□□□□ -0.22
VPS72-204ENST00000471423 SPINK9Q5DT21 86 aa13.67□□□□□ -0.22
VPS72-204ENST00000471423 ZNF343Q6P1L6 599 aa13.67□□□□□ -0.22
VPS72-204ENST00000471423 FAM219AQ8IW50 185 aa13.67□□□□□ -0.22
VPS72-204ENST00000471423 IL22RA2Q969J5 263 aa13.67□□□□□ -0.22
VPS72-204ENST00000471423 FBXL7Q9UJT9 491 aa13.67□□□□□ -0.22
VPS72-204ENST00000471423 FLVCR2Q9UPI3 526 aa13.67□□□□□ -0.22
VPS72-204ENST00000471423 DMRT1Q9Y5R6 373 aa13.67□□□□□ -0.22
VPS72-204ENST00000471423 ST8SIA3O43173 380 aa13.66□□□□□ -0.22
VPS72-204ENST00000471423 NDUFB8O95169 186 aa13.66□□□□□ -0.22
VPS72-204ENST00000471423 TRBV12-3P01733 135 aa13.66□□□□□ -0.22
VPS72-204ENST00000471423 HIST1H1BP16401 226 aaKnown RBP13.66□□□□□ -0.22
VPS72-204ENST00000471423 PPP1R1AQ13522 171 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms