RNA–Protein interactions for RNA: ENST00000468397.1

CDK11A-212, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 2

Gene CDK11A, Length 836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-212ENST00000468397 USMG5Q96IX5 58 aa12.85□□□□□ -0.35
CDK11A-212ENST00000468397 P2RX4Q99571 388 aa12.85□□□□□ -0.35
CDK11A-212ENST00000468397 TMEM14BQ9NUH8 114 aa12.85□□□□□ -0.35
CDK11A-212ENST00000468397 TEX50A0A1B0GTY4 177 aa12.84□□□□□ -0.35
CDK11A-212ENST00000468397 CGB1A6NKQ9 187 aa12.84□□□□□ -0.35
CDK11A-212ENST00000468397 FAM223BA6NKX1 122 aa12.84□□□□□ -0.35
CDK11A-212ENST00000468397 IGKV1-5P01602 117 aa12.84□□□□□ -0.35
CDK11A-212ENST00000468397 IGHV3-11P01762 117 aa12.84□□□□□ -0.35
CDK11A-212ENST00000468397 PSMB6P28072 239 aa12.84□□□□□ -0.35
CDK11A-212ENST00000468397 FAM223AQ8IWN6 122 aa12.84□□□□□ -0.35
CDK11A-212ENST00000468397 MRPL41Q8IXM3 137 aaKnown RBP12.84□□□□□ -0.35
CDK11A-212ENST00000468397 LINC00482Q8N8I6 264 aa12.84□□□□□ -0.35
CDK11A-212ENST00000468397 OR11H1Q8NG94 326 aa12.84□□□□□ -0.35
CDK11A-212ENST00000468397 DPF1Q92782 380 aa12.84□□□□□ -0.35
CDK11A-212ENST00000468397 LSM10Q969L4 123 aaKnown RBP12.84□□□□□ -0.35
CDK11A-212ENST00000468397 DUX3Q96PT4 197 aa12.84□□□□□ -0.35
CDK11A-212ENST00000468397 HINT2Q9BX68 163 aa12.84□□□□□ -0.35
CDK11A-212ENST00000468397 WDR12Q9GZL7 423 aaKnown RBP12.84□□□□□ -0.35
CDK11A-212ENST00000468397 NOTCH1P46531 2555 aa12.84□□□□□ -0.35
CDK11A-212ENST00000468397 PIGBOS1A0A0B4J2F0 54 aa12.83□□□□□ -0.36
CDK11A-212ENST00000468397 IGLC7A0M8Q6 106 aa12.83□□□□□ -0.36
CDK11A-212ENST00000468397 CRYGCP07315 174 aa12.83□□□□□ -0.36
CDK11A-212ENST00000468397 OR8U8P0C7N1 319 aa12.83□□□□□ -0.36
CDK11A-212ENST00000468397 DEFA4P12838 97 aa12.83□□□□□ -0.36
CDK11A-212ENST00000468397 CTRB1P17538 263 aa12.83□□□□□ -0.36
CDK11A-212ENST00000468397 CCR6P51684 374 aa12.83□□□□□ -0.36
CDK11A-212ENST00000468397 RAB25P57735 213 aa12.83□□□□□ -0.36
CDK11A-212ENST00000468397 SRPXP78539 464 aa12.83□□□□□ -0.36
CDK11A-212ENST00000468397 RHOGP84095 191 aa12.83□□□□□ -0.36
CDK11A-212ENST00000468397 ZNF616Q08AN1 781 aa12.83□□□□□ -0.36
CDK11A-212ENST00000468397 TMEM128Q5BJH2 165 aa12.83□□□□□ -0.36
CDK11A-212ENST00000468397 CTRB2Q6GPI1 263 aa12.83□□□□□ -0.36
CDK11A-212ENST00000468397 FAM219AQ8IW50 185 aa12.83□□□□□ -0.36
CDK11A-212ENST00000468397 CENPSQ8N2Z9 138 aa12.83□□□□□ -0.36
CDK11A-212ENST00000468397 NECAP1Q8NC96 275 aa12.83□□□□□ -0.36
CDK11A-212ENST00000468397 WFDC9Q8NEX5 89 aa12.83□□□□□ -0.36
CDK11A-212ENST00000468397 OR1N2Q8NGR9 330 aa12.83□□□□□ -0.36
CDK11A-212ENST00000468397 IL22RA2Q969J5 263 aa12.83□□□□□ -0.36
CDK11A-212ENST00000468397 TMEM56Q96MV1 263 aa12.83□□□□□ -0.36
CDK11A-212ENST00000468397 NDUFA4L2Q9NRX3 87 aa12.83□□□□□ -0.36
CDK11A-212ENST00000468397 TMEM56-RWDD3S4R434 201 aa12.83□□□□□ -0.36
CDK11A-212ENST00000468397 TRBV9A0A0B4J1U6 114 aa12.82□□□□□ -0.36
CDK11A-212ENST00000468397 CYB5BO43169 146 aa12.82□□□□□ -0.36
CDK11A-212ENST00000468397 NDUFB6O95139 128 aa12.82□□□□□ -0.36
CDK11A-212ENST00000468397 PRH1P02810 166 aa12.82□□□□□ -0.36
CDK11A-212ENST00000468397 REG1AP05451 166 aa12.82□□□□□ -0.36
CDK11A-212ENST00000468397 P0C879 139 aa12.82□□□□□ -0.36
CDK11A-212ENST00000468397 HIST1H1BP16401 226 aaKnown RBP12.82□□□□□ -0.36
CDK11A-212ENST00000468397 MECP2P51608 486 aaKnown RBP12.82□□□□□ -0.36
CDK11A-212ENST00000468397 FHL3Q13643 280 aa12.82□□□□□ -0.36
CDK11A-212ENST00000468397 TMEM187Q14656 261 aa12.82□□□□□ -0.36
CDK11A-212ENST00000468397 ZNF846Q147U1 533 aa12.82□□□□□ -0.36
CDK11A-212ENST00000468397 TMEM268Q5VZI3 342 aa12.82□□□□□ -0.36
CDK11A-212ENST00000468397 ZNF429Q86V71 674 aa12.82□□□□□ -0.36
CDK11A-212ENST00000468397 LHFPL5Q8TAF8 219 aa12.82□□□□□ -0.36
CDK11A-212ENST00000468397 RCC1LQ96I51 464 aaKnown RBP12.82□□□□□ -0.36
CDK11A-212ENST00000468397 PDCD10Q9BUL8 212 aa12.82□□□□□ -0.36
CDK11A-212ENST00000468397 ALX4Q9H161 411 aaPredicted RBP12.82□□□□□ -0.36
CDK11A-212ENST00000468397 DBX1A6NMT0 343 aa12.81□□□□□ -0.36
CDK11A-212ENST00000468397 LINC01619G3V211 115 aa12.81□□□□□ -0.36
CDK11A-212ENST00000468397 DUS4LO95620 317 aaKnown RBP12.81□□□□□ -0.36
CDK11A-212ENST00000468397 OR13C7P0DN81 318 aa12.81□□□□□ -0.36
CDK11A-212ENST00000468397 VAMP1P23763 118 aa12.81□□□□□ -0.36
CDK11A-212ENST00000468397 HSPE1P61604 102 aaKnown RBP12.81□□□□□ -0.36
CDK11A-212ENST00000468397 SUPT4H1P63272 117 aaKnown RBP12.81□□□□□ -0.36
CDK11A-212ENST00000468397 DEFA5Q01523 94 aa12.81□□□□□ -0.36
CDK11A-212ENST00000468397 ATP5G2Q06055 141 aa12.81□□□□□ -0.36
CDK11A-212ENST00000468397 IZUMO4Q1ZYL8 232 aa12.81□□□□□ -0.36
CDK11A-212ENST00000468397 SELENOHQ8IZQ5 122 aaKnown RBP12.81□□□□□ -0.36
CDK11A-212ENST00000468397 LGI3Q8N145 548 aa12.81□□□□□ -0.36
CDK11A-212ENST00000468397 OR10W1Q8NGF6 305 aa12.81□□□□□ -0.36
CDK11A-212ENST00000468397 LYRM1O43325 122 aa12.8□□□□□ -0.36
CDK11A-212ENST00000468397 OR2J3O76001 311 aa12.8□□□□□ -0.36
CDK11A-212ENST00000468397 HSPB1P04792 205 aaKnown RBP12.8□□□□□ -0.36
CDK11A-212ENST00000468397 BTCP35070 178 aa12.8□□□□□ -0.36
CDK11A-212ENST00000468397 UBE2MP61081 183 aaKnown RBP12.8□□□□□ -0.36
CDK11A-212ENST00000468397 PRCDQ00LT1 54 aa12.8□□□□□ -0.36
CDK11A-212ENST00000468397 WT1-ASQ06250 92 aa12.8□□□□□ -0.36
CDK11A-212ENST00000468397 C15orf32Q32M92 178 aa12.8□□□□□ -0.36
CDK11A-212ENST00000468397 FAM209BQ5JX69 171 aa12.8□□□□□ -0.36
CDK11A-212ENST00000468397 C19orf35Q6ZS72 473 aa12.8□□□□□ -0.36
CDK11A-212ENST00000468397 SLC35G3Q8N808 338 aa12.8□□□□□ -0.36
CDK11A-212ENST00000468397 MCRIP2Q9BUT9 160 aaKnown RBP12.8□□□□□ -0.36
CDK11A-212ENST00000468397 GPR61Q9BZJ8 451 aa12.8□□□□□ -0.36
CDK11A-212ENST00000468397 RANGRFQ9HD47 186 aaPredicted RBP12.8□□□□□ -0.36
CDK11A-212ENST00000468397 FBXL7Q9UJT9 491 aa12.8□□□□□ -0.36
CDK11A-212ENST00000468397 IGLV11-55A0A075B6I3 123 aa12.79□□□□□ -0.36
CDK11A-212ENST00000468397 IGHV4OR15-8A0A075B7B6 117 aa12.79□□□□□ -0.36
CDK11A-212ENST00000468397 A0A087WW49 117 aa12.79□□□□□ -0.36
CDK11A-212ENST00000468397 A0A0B4J293 547 aa12.79□□□□□ -0.36
CDK11A-212ENST00000468397 A0A0G2JRQ6 117 aa12.79□□□□□ -0.36
CDK11A-212ENST00000468397 IFNA17P01571 189 aa12.79□□□□□ -0.36
CDK11A-212ENST00000468397 EXOSC2Q13868 293 aaKnown RBP12.79□□□□□ -0.36
CDK11A-212ENST00000468397 ZNF343Q6P1L6 599 aa12.79□□□□□ -0.36
CDK11A-212ENST00000468397 PLEKHA3Q9HB20 300 aa12.79□□□□□ -0.36
CDK11A-212ENST00000468397 THYN1Q9P016 225 aa12.79□□□□□ -0.36
CDK11A-212ENST00000468397 A0A0B4J2A0 478 aa12.78□□□□□ -0.36
CDK11A-212ENST00000468397 ANKRD34BA5PLL1 514 aa12.78□□□□□ -0.36
CDK11A-212ENST00000468397 PLA2G10O15496 165 aa12.78□□□□□ -0.36
CDK11A-212ENST00000468397 ST8SIA3O43173 380 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms