RNA–Protein interactions for RNA: ENST00000465601.1

CHPF2-202, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 3

Gene CHPF2, Length 782 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-202ENST00000465601 OR1N2Q8NGR9 330 aa9.59□□□□□ -0.87
CHPF2-202ENST00000465601 LHFPL5Q8TAF8 219 aa9.59□□□□□ -0.87
CHPF2-202ENST00000465601 S100ZQ8WXG8 99 aa9.59□□□□□ -0.87
CHPF2-202ENST00000465601 TSC22D3Q99576 134 aa9.59□□□□□ -0.87
CHPF2-202ENST00000465601 SLC25A21Q9BQT8 299 aaPredicted RBP9.59□□□□□ -0.87
CHPF2-202ENST00000465601 QTRT1Q9BXR0 403 aaKnown RBP9.59□□□□□ -0.87
CHPF2-202ENST00000465601 PRR13Q9NZ81 148 aa9.59□□□□□ -0.87
CHPF2-202ENST00000465601 ZNF257Q9Y2Q1 563 aa9.59□□□□□ -0.87
CHPF2-202ENST00000465601 KCNIP3Q9Y2W7 256 aa9.59□□□□□ -0.87
CHPF2-202ENST00000465601 SORL1Q92673 2214 aa9.59□□□□□ -0.87
CHPF2-202ENST00000465601 A0A0G2JLM5 398 aa9.58□□□□□ -0.88
CHPF2-202ENST00000465601 IGLC7A0M8Q6 106 aa9.58□□□□□ -0.88
CHPF2-202ENST00000465601 C15orf61A6NNL5 157 aa9.58□□□□□ -0.88
CHPF2-202ENST00000465601 CENPXA8MT69 81 aa9.58□□□□□ -0.88
CHPF2-202ENST00000465601 ATG12O94817 140 aa9.58□□□□□ -0.88
CHPF2-202ENST00000465601 CRYGCP07315 174 aa9.58□□□□□ -0.88
CHPF2-202ENST00000465601 LGALS1P09382 135 aaKnown RBP9.58□□□□□ -0.88
CHPF2-202ENST00000465601 P0C879 139 aa9.58□□□□□ -0.88
CHPF2-202ENST00000465601 CTRB1P17538 263 aa9.58□□□□□ -0.88
CHPF2-202ENST00000465601 SUPT4H1P63272 117 aaKnown RBP9.58□□□□□ -0.88
CHPF2-202ENST00000465601 RHOGP84095 191 aa9.58□□□□□ -0.88
CHPF2-202ENST00000465601 TMEM187Q14656 261 aa9.58□□□□□ -0.88
CHPF2-202ENST00000465601 CTRB2Q6GPI1 263 aa9.58□□□□□ -0.88
CHPF2-202ENST00000465601 RNASE11Q8TAA1 199 aaKnown RBP9.58□□□□□ -0.88
CHPF2-202ENST00000465601 DPF1Q92782 380 aa9.58□□□□□ -0.88
CHPF2-202ENST00000465601 RRNAD1Q96FB5 475 aaKnown RBP9.58□□□□□ -0.88
CHPF2-202ENST00000465601 NDUFA4L2Q9NRX3 87 aa9.58□□□□□ -0.88
CHPF2-202ENST00000465601 TMEM14BQ9NUH8 114 aa9.58□□□□□ -0.88
CHPF2-202ENST00000465601 FKBP11Q9NYL4 201 aa9.58□□□□□ -0.88
CHPF2-202ENST00000465601 TRBV9A0A0B4J1U6 114 aa9.57□□□□□ -0.88
CHPF2-202ENST00000465601 A0A0B4J293 547 aa9.57□□□□□ -0.88
CHPF2-202ENST00000465601 A0A0G2JRQ6 117 aa9.57□□□□□ -0.88
CHPF2-202ENST00000465601 ANKRD34BA5PLL1 514 aa9.57□□□□□ -0.88
CHPF2-202ENST00000465601 G3V4G9 280 aa9.57□□□□□ -0.88
CHPF2-202ENST00000465601 PLA2G10O15496 165 aa9.57□□□□□ -0.88
CHPF2-202ENST00000465601 OR2J3O76001 311 aa9.57□□□□□ -0.88
CHPF2-202ENST00000465601 OR13C7P0DN81 318 aa9.57□□□□□ -0.88
CHPF2-202ENST00000465601 IGLL1P15814 213 aa9.57□□□□□ -0.88
CHPF2-202ENST00000465601 BTCP35070 178 aa9.57□□□□□ -0.88
CHPF2-202ENST00000465601 ZNF616Q08AN1 781 aa9.57□□□□□ -0.88
CHPF2-202ENST00000465601 RBMS2Q15434 407 aaKnown RBP9.57□□□□□ -0.88
CHPF2-202ENST00000465601 OXLD1Q5BKU9 147 aa9.57□□□□□ -0.88
CHPF2-202ENST00000465601 TMEM268Q5VZI3 342 aa9.57□□□□□ -0.88
CHPF2-202ENST00000465601 C1QL4Q86Z23 238 aa9.57□□□□□ -0.88
CHPF2-202ENST00000465601 OR5B3Q8NH48 314 aa9.57□□□□□ -0.88
CHPF2-202ENST00000465601 RBPMSQ93062 196 aaKnown RBP9.57□□□□□ -0.88
CHPF2-202ENST00000465601 GALNT14Q96FL9 552 aa9.57□□□□□ -0.88
CHPF2-202ENST00000465601 USMG5Q96IX5 58 aa9.57□□□□□ -0.88
CHPF2-202ENST00000465601 TMEM56Q96MV1 263 aa9.57□□□□□ -0.88
CHPF2-202ENST00000465601 FANCD2OSQ96PS1 177 aa9.57□□□□□ -0.88
CHPF2-202ENST00000465601 C7orf50Q9BRJ6 194 aaKnown RBP9.57□□□□□ -0.88
CHPF2-202ENST00000465601 SRSF8Q9BRL6 282 aaKnown RBP9.57□□□□□ -0.88
CHPF2-202ENST00000465601 CCDC32Q9BV29 185 aa9.57□□□□□ -0.88
CHPF2-202ENST00000465601 TMEM56-RWDD3S4R434 201 aa9.57□□□□□ -0.88
CHPF2-202ENST00000465601 IGHV4OR15-8A0A075B7B6 117 aa9.56□□□□□ -0.88
CHPF2-202ENST00000465601 A0A087WW49 117 aa9.56□□□□□ -0.88
CHPF2-202ENST00000465601 LINC01619G3V211 115 aa9.56□□□□□ -0.88
CHPF2-202ENST00000465601 NDUFB6O95139 128 aa9.56□□□□□ -0.88
CHPF2-202ENST00000465601 NDUFB8O95169 186 aa9.56□□□□□ -0.88
CHPF2-202ENST00000465601 HSPB1P04792 205 aaKnown RBP9.56□□□□□ -0.88
CHPF2-202ENST00000465601 DEFA4P12838 97 aa9.56□□□□□ -0.88
CHPF2-202ENST00000465601 MECP2P51608 486 aaKnown RBP9.56□□□□□ -0.88
CHPF2-202ENST00000465601 HSPE1P61604 102 aaKnown RBP9.56□□□□□ -0.88
CHPF2-202ENST00000465601 ATP5G2Q06055 141 aa9.56□□□□□ -0.88
CHPF2-202ENST00000465601 WT1-ASQ06250 92 aa9.56□□□□□ -0.88
CHPF2-202ENST00000465601 FHL3Q13643 280 aa9.56□□□□□ -0.88
CHPF2-202ENST00000465601 TMEM128Q5BJH2 165 aa9.56□□□□□ -0.88
CHPF2-202ENST00000465601 THOC7Q6I9Y2 204 aaKnown RBP9.56□□□□□ -0.88
CHPF2-202ENST00000465601 Q6ZRM9 215 aa9.56□□□□□ -0.88
CHPF2-202ENST00000465601 CENPSQ8N2Z9 138 aa9.56□□□□□ -0.88
CHPF2-202ENST00000465601 NECAP1Q8NC96 275 aa9.56□□□□□ -0.88
CHPF2-202ENST00000465601 LSM10Q969L4 123 aaKnown RBP9.56□□□□□ -0.88
CHPF2-202ENST00000465601 GPR146Q96CH1 333 aa9.56□□□□□ -0.88
CHPF2-202ENST00000465601 FBXL7Q9UJT9 491 aa9.56□□□□□ -0.88
CHPF2-202ENST00000465601 FLVCR2Q9UPI3 526 aa9.56□□□□□ -0.88
CHPF2-202ENST00000465601 MEGF8Q7Z7M0 2845 aa9.55□□□□□ -0.88
CHPF2-202ENST00000465601 FAM223BA6NKX1 122 aa9.55□□□□□ -0.88
CHPF2-202ENST00000465601 ST8SIA3O43173 380 aa9.55□□□□□ -0.88
CHPF2-202ENST00000465601 LYRM1O43325 122 aa9.55□□□□□ -0.88
CHPF2-202ENST00000465601 DHFRP00374 187 aa9.55□□□□□ -0.88
CHPF2-202ENST00000465601 OR8U8P0C7N1 319 aa9.55□□□□□ -0.88
CHPF2-202ENST00000465601 ANXA3P12429 323 aa9.55□□□□□ -0.88
CHPF2-202ENST00000465601 VAMP1P23763 118 aa9.55□□□□□ -0.88
CHPF2-202ENST00000465601 SLURP1P55000 103 aa9.55□□□□□ -0.88
CHPF2-202ENST00000465601 ZNF846Q147U1 533 aa9.55□□□□□ -0.88
CHPF2-202ENST00000465601 C15orf32Q32M92 178 aa9.55□□□□□ -0.88
CHPF2-202ENST00000465601 SPINK9Q5DT21 86 aa9.55□□□□□ -0.88
CHPF2-202ENST00000465601 ZNF343Q6P1L6 599 aa9.55□□□□□ -0.88
CHPF2-202ENST00000465601 HSD17B13Q7Z5P4 300 aaPredicted RBP9.55□□□□□ -0.88
CHPF2-202ENST00000465601 ZNF429Q86V71 674 aa9.55□□□□□ -0.88
CHPF2-202ENST00000465601 FAM223AQ8IWN6 122 aa9.55□□□□□ -0.88
CHPF2-202ENST00000465601 DNAH3Q8TD57 4116 aa9.54□□□□□ -0.88
CHPF2-202ENST00000465601 IGLV11-55A0A075B6I3 123 aa9.54□□□□□ -0.88
CHPF2-202ENST00000465601 SFT2D2O95562 160 aa9.54□□□□□ -0.88
CHPF2-202ENST00000465601 IFNA17P01571 189 aa9.54□□□□□ -0.88
CHPF2-202ENST00000465601 TRBV12-3P01733 135 aa9.54□□□□□ -0.88
CHPF2-202ENST00000465601 IGHV3-23P01764 117 aa9.54□□□□□ -0.88
CHPF2-202ENST00000465601 HIST1H1BP16401 226 aaKnown RBP9.54□□□□□ -0.88
CHPF2-202ENST00000465601 PRCDQ00LT1 54 aa9.54□□□□□ -0.88
CHPF2-202ENST00000465601 PPP1R1AQ13522 171 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms