RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 SCP2D1Q9UJQ7 156 aa13.62□□□□□ -0.23
VPS52-214ENST00000463486 TGP01266 2768 aa13.61□□□□□ -0.23
VPS52-214ENST00000463486 A0A0B4J293 547 aa13.61□□□□□ -0.23
VPS52-214ENST00000463486 C15orf61A6NNL5 157 aa13.61□□□□□ -0.23
VPS52-214ENST00000463486 LINC01619G3V211 115 aa13.61□□□□□ -0.23
VPS52-214ENST00000463486 B3GALNT1O75752 331 aa13.61□□□□□ -0.23
VPS52-214ENST00000463486 CDS2O95674 445 aa13.61□□□□□ -0.23
VPS52-214ENST00000463486 HSPB1P04792 205 aaKnown RBP13.61□□□□□ -0.23
VPS52-214ENST00000463486 REG1AP05451 166 aa13.61□□□□□ -0.23
VPS52-214ENST00000463486 OR8U8P0C7N1 319 aa13.61□□□□□ -0.23
VPS52-214ENST00000463486 AP3S2P59780 193 aa13.61□□□□□ -0.23
VPS52-214ENST00000463486 IZUMO4Q1ZYL8 232 aa13.61□□□□□ -0.23
VPS52-214ENST00000463486 CNPY1Q3B7I2 92 aa13.61□□□□□ -0.23
VPS52-214ENST00000463486 NECAP1Q8NC96 275 aa13.61□□□□□ -0.23
VPS52-214ENST00000463486 OR1L8Q8NGR8 309 aa13.61□□□□□ -0.23
VPS52-214ENST00000463486 PRNDQ9UKY0 176 aa13.61□□□□□ -0.23
VPS52-214ENST00000463486 C14orf166Q9Y224 244 aaKnown RBP13.61□□□□□ -0.23
VPS52-214ENST00000463486 OR51B2Q9Y5P1 312 aa13.61□□□□□ -0.23
VPS52-214ENST00000463486 IGLV11-55A0A075B6I3 123 aa13.6□□□□□ -0.23
VPS52-214ENST00000463486 A0A0G2JRQ6 117 aa13.6□□□□□ -0.23
VPS52-214ENST00000463486 TEX13DA0A0J9YY54 714 aaPredicted RBP13.6□□□□□ -0.23
VPS52-214ENST00000463486 C13orf42A0A1B0GVH6 325 aa13.6□□□□□ -0.23
VPS52-214ENST00000463486 FAM223BA6NKX1 122 aa13.6□□□□□ -0.23
VPS52-214ENST00000463486 DUS4LO95620 317 aaKnown RBP13.6□□□□□ -0.23
VPS52-214ENST00000463486 TRBV12-3P01733 135 aa13.6□□□□□ -0.23
VPS52-214ENST00000463486 OR5AC1P0C628 307 aa13.6□□□□□ -0.23
VPS52-214ENST00000463486 TRAPPC2P0DI81 140 aa13.6□□□□□ -0.23
VPS52-214ENST00000463486 TRAPPC2BP0DI82 140 aa13.6□□□□□ -0.23
VPS52-214ENST00000463486 SLURP1P55000 103 aa13.6□□□□□ -0.23
VPS52-214ENST00000463486 KRTAP10-11P60412 298 aa13.6□□□□□ -0.23
VPS52-214ENST00000463486 SUPT4H1P63272 117 aaKnown RBP13.6□□□□□ -0.23
VPS52-214ENST00000463486 EGFEM1PQ0D2K5 195 aa13.6□□□□□ -0.23
VPS52-214ENST00000463486 FAM223AQ8IWN6 122 aa13.6□□□□□ -0.23
VPS52-214ENST00000463486 DCUN1D4Q92564 292 aa13.6□□□□□ -0.23
VPS52-214ENST00000463486 DLX4Q92988 240 aaPredicted RBP13.6□□□□□ -0.23
VPS52-214ENST00000463486 TSC22D3Q99576 134 aa13.6□□□□□ -0.23
VPS52-214ENST00000463486 SNAPC5O75971 98 aa13.59□□□□□ -0.23
VPS52-214ENST00000463486 OR2J3O76001 311 aa13.59□□□□□ -0.23
VPS52-214ENST00000463486 NDUFB8O95169 186 aa13.59□□□□□ -0.23
VPS52-214ENST00000463486 RAB25P57735 213 aa13.59□□□□□ -0.23
VPS52-214ENST00000463486 Q6ZRM9 215 aa13.59□□□□□ -0.23
VPS52-214ENST00000463486 H2BFWTQ7Z2G1 175 aa13.59□□□□□ -0.23
VPS52-214ENST00000463486 OR5B3Q8NH48 314 aa13.59□□□□□ -0.23
VPS52-214ENST00000463486 GALNT14Q96FL9 552 aa13.59□□□□□ -0.23
VPS52-214ENST00000463486 TMEM56Q96MV1 263 aa13.59□□□□□ -0.23
VPS52-214ENST00000463486 TMEM56-RWDD3S4R434 201 aa13.59□□□□□ -0.23
VPS52-214ENST00000463486 ANKRD34BA5PLL1 514 aa13.58□□□□□ -0.24
VPS52-214ENST00000463486 FAUP35544 74 aaKnown RBP13.58□□□□□ -0.24
VPS52-214ENST00000463486 MFAP2P55001 183 aa13.58□□□□□ -0.24
VPS52-214ENST00000463486 ATP5G2Q06055 141 aa13.58□□□□□ -0.24
VPS52-214ENST00000463486 TMEM187Q14656 261 aa13.58□□□□□ -0.24
VPS52-214ENST00000463486 C15orf32Q32M92 178 aa13.58□□□□□ -0.24
VPS52-214ENST00000463486 THOC7Q6I9Y2 204 aaKnown RBP13.58□□□□□ -0.24
VPS52-214ENST00000463486 LINC00299Q6ZSB3 139 aa13.58□□□□□ -0.24
VPS52-214ENST00000463486 ZNF429Q86V71 674 aa13.58□□□□□ -0.24
VPS52-214ENST00000463486 SELENOHQ8IZQ5 122 aaKnown RBP13.58□□□□□ -0.24
VPS52-214ENST00000463486 DPF1Q92782 380 aa13.58□□□□□ -0.24
VPS52-214ENST00000463486 SCGB3A2Q96PL1 93 aa13.58□□□□□ -0.24
VPS52-214ENST00000463486 MCRIP2Q9BUT9 160 aaKnown RBP13.58□□□□□ -0.24
VPS52-214ENST00000463486 RANGRFQ9HD47 186 aaPredicted RBP13.58□□□□□ -0.24
VPS52-214ENST00000463486 FKBP11Q9NYL4 201 aa13.58□□□□□ -0.24
VPS52-214ENST00000463486 PEF1Q9UBV8 284 aaKnown RBP13.58□□□□□ -0.24
VPS52-214ENST00000463486 PRB2P02812 416 aaPredicted RBP13.57□□□□□ -0.24
VPS52-214ENST00000463486 OR13C7P0DN81 318 aa13.57□□□□□ -0.24
VPS52-214ENST00000463486 HOXD3P31249 432 aaPredicted RBP13.57□□□□□ -0.24
VPS52-214ENST00000463486 HSPE1P61604 102 aaKnown RBP13.57□□□□□ -0.24
VPS52-214ENST00000463486 TRIM16LQ309B1 348 aa13.57□□□□□ -0.24
VPS52-214ENST00000463486 AARDQ4LEZ3 155 aa13.57□□□□□ -0.24
VPS52-214ENST00000463486 HSD17B13Q7Z5P4 300 aaPredicted RBP13.57□□□□□ -0.24
VPS52-214ENST00000463486 LSM10Q969L4 123 aaKnown RBP13.57□□□□□ -0.24
VPS52-214ENST00000463486 FBXL7Q9UJT9 491 aa13.57□□□□□ -0.24
VPS52-214ENST00000463486 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.56□□□□□ -0.24
VPS52-214ENST00000463486 IL7P13232 177 aa13.56□□□□□ -0.24
VPS52-214ENST00000463486 BTCP35070 178 aa13.56□□□□□ -0.24
VPS52-214ENST00000463486 DHODHQ02127 395 aa13.56□□□□□ -0.24
VPS52-214ENST00000463486 KLF5Q13887 457 aaPredicted RBP13.56□□□□□ -0.24
VPS52-214ENST00000463486 ZNF57Q68EA5 555 aaPredicted RBP13.56□□□□□ -0.24
VPS52-214ENST00000463486 OR4A16Q8NH70 328 aa13.56□□□□□ -0.24
VPS52-214ENST00000463486 SLC25A21Q9BQT8 299 aaPredicted RBP13.56□□□□□ -0.24
VPS52-214ENST00000463486 PRR13Q9NZ81 148 aa13.56□□□□□ -0.24
VPS52-214ENST00000463486 DNAH9Q9NYC9 4486 aa13.55□□□□□ -0.24
VPS52-214ENST00000463486 BMPR1BO00238 502 aa13.55□□□□□ -0.24
VPS52-214ENST00000463486 OVOL1O14753 267 aa13.55□□□□□ -0.24
VPS52-214ENST00000463486 HIST1H1BP16401 226 aaKnown RBP13.55□□□□□ -0.24
VPS52-214ENST00000463486 AKR1C4P17516 323 aa13.55□□□□□ -0.24
VPS52-214ENST00000463486 CCR6P51684 374 aa13.55□□□□□ -0.24
VPS52-214ENST00000463486 PRCDQ00LT1 54 aa13.55□□□□□ -0.24
VPS52-214ENST00000463486 EXOSC2Q13868 293 aaKnown RBP13.55□□□□□ -0.24
VPS52-214ENST00000463486 TRIQKQ629K1 86 aa13.55□□□□□ -0.24
VPS52-214ENST00000463486 SGPP2Q8IWX5 399 aa13.55□□□□□ -0.24
VPS52-214ENST00000463486 RBPMSQ93062 196 aaKnown RBP13.55□□□□□ -0.24
VPS52-214ENST00000463486 CCDC140Q96MF4 163 aa13.55□□□□□ -0.24
VPS52-214ENST00000463486 HINT2Q9BX68 163 aa13.55□□□□□ -0.24
VPS52-214ENST00000463486 SEC14L6B5MCN3 397 aa13.54□□□□□ -0.24
VPS52-214ENST00000463486 PLA2G10O15496 165 aa13.54□□□□□ -0.24
VPS52-214ENST00000463486 ATG12O94817 140 aa13.54□□□□□ -0.24
VPS52-214ENST00000463486 DHFRP00374 187 aa13.54□□□□□ -0.24
VPS52-214ENST00000463486 AKR1C2P52895 323 aa13.54□□□□□ -0.24
VPS52-214ENST00000463486 ACSM6Q6P461 480 aa13.54□□□□□ -0.24
VPS52-214ENST00000463486 IL34Q6ZMJ4 242 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms