RNA–Protein interactions for RNA: ENST00000443563.5

HDAC6-211, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-211ENST00000443563 DEFA4P12838 97 aa8.41□□□□□ -1.06
HDAC6-211ENST00000443563 HIST1H1BP16401 226 aaKnown RBP8.41□□□□□ -1.06
HDAC6-211ENST00000443563 AKR1C4P17516 323 aa8.41□□□□□ -1.06
HDAC6-211ENST00000443563 PSMB6P28072 239 aa8.41□□□□□ -1.06
HDAC6-211ENST00000443563 SRPXP78539 464 aa8.41□□□□□ -1.06
HDAC6-211ENST00000443563 ZNF616Q08AN1 781 aa8.41□□□□□ -1.06
HDAC6-211ENST00000443563 SP6Q3SY56 376 aa8.41□□□□□ -1.06
HDAC6-211ENST00000443563 TMEM128Q5BJH2 165 aa8.41□□□□□ -1.06
HDAC6-211ENST00000443563 ETV3LQ6ZN32 361 aa8.41□□□□□ -1.06
HDAC6-211ENST00000443563 LINC00482Q8N8I6 264 aa8.41□□□□□ -1.06
HDAC6-211ENST00000443563 NECAP1Q8NC96 275 aa8.41□□□□□ -1.06
HDAC6-211ENST00000443563 OR11H1Q8NG94 326 aa8.41□□□□□ -1.06
HDAC6-211ENST00000443563 OR1N2Q8NGR9 330 aa8.41□□□□□ -1.06
HDAC6-211ENST00000443563 CASTOR1Q8WTX7 329 aa8.41□□□□□ -1.06
HDAC6-211ENST00000443563 GLYATL2Q8WU03 294 aa8.41□□□□□ -1.06
HDAC6-211ENST00000443563 RBPMSQ93062 196 aaKnown RBP8.41□□□□□ -1.06
HDAC6-211ENST00000443563 IL22RA2Q969J5 263 aa8.41□□□□□ -1.06
HDAC6-211ENST00000443563 LSM10Q969L4 123 aaKnown RBP8.41□□□□□ -1.06
HDAC6-211ENST00000443563 RCC1LQ96I51 464 aaKnown RBP8.41□□□□□ -1.06
HDAC6-211ENST00000443563 SDHCQ99643 169 aaPredicted RBP8.41□□□□□ -1.06
HDAC6-211ENST00000443563 WDR12Q9GZL7 423 aaKnown RBP8.41□□□□□ -1.06
HDAC6-211ENST00000443563 AKIP1Q9NQ31 210 aa8.41□□□□□ -1.06
HDAC6-211ENST00000443563 TMEM14BQ9NUH8 114 aa8.41□□□□□ -1.06
HDAC6-211ENST00000443563 TRBV9A0A0B4J1U6 114 aa8.4□□□□□ -1.06
HDAC6-211ENST00000443563 E7EUB6 86 aa8.4□□□□□ -1.06
HDAC6-211ENST00000443563 LINC01619G3V211 115 aa8.4□□□□□ -1.06
HDAC6-211ENST00000443563 HSPB1P04792 205 aaKnown RBP8.4□□□□□ -1.06
HDAC6-211ENST00000443563 CTRB1P17538 263 aa8.4□□□□□ -1.06
HDAC6-211ENST00000443563 RAB25P57735 213 aa8.4□□□□□ -1.06
HDAC6-211ENST00000443563 ATP5G2Q06055 141 aa8.4□□□□□ -1.06
HDAC6-211ENST00000443563 FHL3Q13643 280 aa8.4□□□□□ -1.06
HDAC6-211ENST00000443563 DEFB136Q30KP8 78 aa8.4□□□□□ -1.06
HDAC6-211ENST00000443563 CTRB2Q6GPI1 263 aa8.4□□□□□ -1.06
HDAC6-211ENST00000443563 TMED4Q7Z7H5 227 aa8.4□□□□□ -1.06
HDAC6-211ENST00000443563 ZNF429Q86V71 674 aa8.4□□□□□ -1.06
HDAC6-211ENST00000443563 CENPSQ8N2Z9 138 aa8.4□□□□□ -1.06
HDAC6-211ENST00000443563 OR1L6Q8NGR2 347 aa8.4□□□□□ -1.06
HDAC6-211ENST00000443563 TMEM230Q96A57 120 aa8.4□□□□□ -1.06
HDAC6-211ENST00000443563 OR5B12Q96R08 314 aa8.4□□□□□ -1.06
HDAC6-211ENST00000443563 PDCD10Q9BUL8 212 aa8.4□□□□□ -1.06
HDAC6-211ENST00000443563 HINT2Q9BX68 163 aa8.4□□□□□ -1.06
HDAC6-211ENST00000443563 RANGRFQ9HD47 186 aaPredicted RBP8.4□□□□□ -1.06
HDAC6-211ENST00000443563 NDUFA4L2Q9NRX3 87 aa8.4□□□□□ -1.06
HDAC6-211ENST00000443563 THYN1Q9P016 225 aa8.4□□□□□ -1.06
HDAC6-211ENST00000443563 CACFD1Q9UGQ2 172 aa8.4□□□□□ -1.06
HDAC6-211ENST00000443563 NSG2Q9Y328 171 aa8.4□□□□□ -1.06
HDAC6-211ENST00000443563 TMEM56-RWDD3S4R434 201 aa8.4□□□□□ -1.06
HDAC6-211ENST00000443563 WNK1Q9H4A3 2382 aa8.4□□□□□ -1.07
HDAC6-211ENST00000443563 LINC00854A0A1B0GVQ3 168 aa8.39□□□□□ -1.07
HDAC6-211ENST00000443563 A0A1B0GW64 132 aa8.39□□□□□ -1.07
HDAC6-211ENST00000443563 IGLC7A0M8Q6 106 aa8.39□□□□□ -1.07
HDAC6-211ENST00000443563 CGB1A6NKQ9 187 aa8.39□□□□□ -1.07
HDAC6-211ENST00000443563 IGKV1-5P01602 117 aa8.39□□□□□ -1.07
HDAC6-211ENST00000443563 IGHV3-11P01762 117 aa8.39□□□□□ -1.07
HDAC6-211ENST00000443563 MYOD1P15172 320 aa8.39□□□□□ -1.07
HDAC6-211ENST00000443563 AREGP15514 252 aa8.39□□□□□ -1.07
HDAC6-211ENST00000443563 MECP2P51608 486 aaKnown RBP8.39□□□□□ -1.07
HDAC6-211ENST00000443563 UBE2MP61081 183 aaKnown RBP8.39□□□□□ -1.07
HDAC6-211ENST00000443563 HSPE1P61604 102 aaKnown RBP8.39□□□□□ -1.07
HDAC6-211ENST00000443563 RHOGP84095 191 aa8.39□□□□□ -1.07
HDAC6-211ENST00000443563 TMEM187Q14656 261 aa8.39□□□□□ -1.07
HDAC6-211ENST00000443563 ZNF846Q147U1 533 aa8.39□□□□□ -1.07
HDAC6-211ENST00000443563 KLK9Q2XQG4 91 aa8.39□□□□□ -1.07
HDAC6-211ENST00000443563 TMEM268Q5VZI3 342 aa8.39□□□□□ -1.07
HDAC6-211ENST00000443563 LGI3Q8N145 548 aa8.39□□□□□ -1.07
HDAC6-211ENST00000443563 DUX3Q96PT4 197 aa8.39□□□□□ -1.07
HDAC6-211ENST00000443563 KLK9Q9UKQ9 250 aa8.39□□□□□ -1.07
HDAC6-211ENST00000443563 DUXBA0A1W2PPF3 345 aa8.38□□□□□ -1.07
HDAC6-211ENST00000443563 NDUFB6O95139 128 aa8.38□□□□□ -1.07
HDAC6-211ENST00000443563 IFNA17P01571 189 aa8.38□□□□□ -1.07
HDAC6-211ENST00000443563 REG1AP05451 166 aa8.38□□□□□ -1.07
HDAC6-211ENST00000443563 P0C879 139 aa8.38□□□□□ -1.07
HDAC6-211ENST00000443563 OR13C7P0DN81 318 aa8.38□□□□□ -1.07
HDAC6-211ENST00000443563 ZP3P21754 424 aa8.38□□□□□ -1.07
HDAC6-211ENST00000443563 CCR6P51684 374 aa8.38□□□□□ -1.07
HDAC6-211ENST00000443563 ERHP84090 104 aaKnown RBP8.38□□□□□ -1.07
HDAC6-211ENST00000443563 PRCDQ00LT1 54 aa8.38□□□□□ -1.07
HDAC6-211ENST00000443563 ZNF343Q6P1L6 599 aa8.38□□□□□ -1.07
HDAC6-211ENST00000443563 SELENOHQ8IZQ5 122 aaKnown RBP8.38□□□□□ -1.07
HDAC6-211ENST00000443563 OR10W1Q8NGF6 305 aa8.38□□□□□ -1.07
HDAC6-211ENST00000443563 CXorf58Q96LI9 332 aa8.38□□□□□ -1.07
HDAC6-211ENST00000443563 PLEKHA3Q9HB20 300 aa8.38□□□□□ -1.07
HDAC6-211ENST00000443563 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.38□□□□□ -1.07
HDAC6-211ENST00000443563 PEF1Q9UBV8 284 aaKnown RBP8.38□□□□□ -1.07
HDAC6-211ENST00000443563 ZMAT5Q9UDW3 170 aaKnown RBP8.38□□□□□ -1.07
HDAC6-211ENST00000443563 FBXL7Q9UJT9 491 aa8.38□□□□□ -1.07
HDAC6-211ENST00000443563 DNAH3Q8TD57 4116 aa8.37□□□□□ -1.07
HDAC6-211ENST00000443563 IGLV11-55A0A075B6I3 123 aa8.37□□□□□ -1.07
HDAC6-211ENST00000443563 IGHV4OR15-8A0A075B7B6 117 aa8.37□□□□□ -1.07
HDAC6-211ENST00000443563 A0A087WW49 117 aa8.37□□□□□ -1.07
HDAC6-211ENST00000443563 A0A0B4J2A0 478 aa8.37□□□□□ -1.07
HDAC6-211ENST00000443563 LYRM1O43325 122 aa8.37□□□□□ -1.07
HDAC6-211ENST00000443563 OR2J3O76001 311 aa8.37□□□□□ -1.07
HDAC6-211ENST00000443563 PRH1P02810 166 aa8.37□□□□□ -1.07
HDAC6-211ENST00000443563 IGLL1P15814 213 aa8.37□□□□□ -1.07
HDAC6-211ENST00000443563 VAMP1P23763 118 aa8.37□□□□□ -1.07
HDAC6-211ENST00000443563 SUPT4H1P63272 117 aaKnown RBP8.37□□□□□ -1.07
HDAC6-211ENST00000443563 WT1-ASQ06250 92 aa8.37□□□□□ -1.07
HDAC6-211ENST00000443563 EXOSC2Q13868 293 aaKnown RBP8.37□□□□□ -1.07
HDAC6-211ENST00000443563 TATDN3Q17R31 274 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 158 ms