RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 CFHR2P36980 270 aa7.38□□□□□ -1.23
CDC42BPA-206ENST00000429440 RPS21P63220 83 aaKnown RBP7.38□□□□□ -1.23
CDC42BPA-206ENST00000429440 TCEA2Q15560 299 aa7.38□□□□□ -1.23
CDC42BPA-206ENST00000429440 FNDC7Q5VTL7 733 aa7.38□□□□□ -1.23
CDC42BPA-206ENST00000429440 ZNF818PQ6ZRF7 136 aa7.38□□□□□ -1.23
CDC42BPA-206ENST00000429440 TEX45Q8NA69 505 aa7.38□□□□□ -1.23
CDC42BPA-206ENST00000429440 FLVCR1-AS1Q8TAF5 88 aa7.38□□□□□ -1.23
CDC42BPA-206ENST00000429440 LRRC29Q8WV35 223 aa7.38□□□□□ -1.23
CDC42BPA-206ENST00000429440 KCNS2Q9ULS6 477 aa7.38□□□□□ -1.23
CDC42BPA-206ENST00000429440 HILPDAQ9Y5L2 63 aa7.38□□□□□ -1.23
CDC42BPA-206ENST00000429440 LRP4O75096 1905 aa7.38□□□□□ -1.23
CDC42BPA-206ENST00000429440 ZNF816-ZNF321PA0A0X1KG74 233 aa7.38□□□□□ -1.23
CDC42BPA-206ENST00000429440 A0A1W2PQF6 199 aa7.38□□□□□ -1.23
CDC42BPA-206ENST00000429440 A1L4Q6 167 aa7.38□□□□□ -1.23
CDC42BPA-206ENST00000429440 A4D1N5 150 aa7.38□□□□□ -1.23
CDC42BPA-206ENST00000429440 SPINK4O60575 86 aa7.38□□□□□ -1.23
CDC42BPA-206ENST00000429440 MT-ATP8P03928 68 aa7.38□□□□□ -1.23
CDC42BPA-206ENST00000429440 FCGR2BP31994 310 aaPredicted RBP7.38□□□□□ -1.23
CDC42BPA-206ENST00000429440 OR1D4P47884 311 aa7.38□□□□□ -1.23
CDC42BPA-206ENST00000429440 ATP5IP56385 69 aaPredicted RBP7.38□□□□□ -1.23
CDC42BPA-206ENST00000429440 RPL31P62899 125 aaKnown RBP7.38□□□□□ -1.23
CDC42BPA-206ENST00000429440 FOXE3Q13461 319 aa7.38□□□□□ -1.23
CDC42BPA-206ENST00000429440 DMRTC1Q5HYR2 192 aa7.38□□□□□ -1.23
CDC42BPA-206ENST00000429440 SPANXN5Q5MJ07 72 aa7.38□□□□□ -1.23
CDC42BPA-206ENST00000429440 ZFAND6Q6FIF0 208 aa7.38□□□□□ -1.23
CDC42BPA-206ENST00000429440 Q6ZS92 163 aa7.38□□□□□ -1.23
CDC42BPA-206ENST00000429440 DDB2Q92466 427 aa7.38□□□□□ -1.23
CDC42BPA-206ENST00000429440 PTH2Q96A98 100 aa7.38□□□□□ -1.23
CDC42BPA-206ENST00000429440 NPCDR1Q9BY65 106 aa7.38□□□□□ -1.23
CDC42BPA-206ENST00000429440 VCX2Q9H322 139 aa7.38□□□□□ -1.23
CDC42BPA-206ENST00000429440 TMEM74BQ9NUR3 256 aa7.38□□□□□ -1.23
CDC42BPA-206ENST00000429440 BRWD1Q9NSI6 2320 aa7.38□□□□□ -1.23
CDC42BPA-206ENST00000429440 SPEGQ15772 3267 aa7.38□□□□□ -1.23
CDC42BPA-206ENST00000429440 FABP5P3A8MUU1 101 aa7.37□□□□□ -1.23
CDC42BPA-206ENST00000429440 NHLRC4P0CG21 123 aaPredicted RBP7.37□□□□□ -1.23
CDC42BPA-206ENST00000429440 FCGR2AP12318 317 aa7.37□□□□□ -1.23
CDC42BPA-206ENST00000429440 CD38P28907 300 aa7.37□□□□□ -1.23
CDC42BPA-206ENST00000429440 VDAC2P45880 294 aaPredicted RBP7.37□□□□□ -1.23
CDC42BPA-206ENST00000429440 RPS15AP62244 130 aaKnown RBP7.37□□□□□ -1.23
CDC42BPA-206ENST00000429440 ZNF146Q15072 292 aa7.37□□□□□ -1.23
CDC42BPA-206ENST00000429440 TUSC5Q8IXB3 177 aa7.37□□□□□ -1.23
CDC42BPA-206ENST00000429440 OR1L1Q8NH94 360 aa7.37□□□□□ -1.23
CDC42BPA-206ENST00000429440 URB1-AS1Q96HZ7 61 aa7.37□□□□□ -1.23
CDC42BPA-206ENST00000429440 C20orf78Q9BR46 151 aa7.37□□□□□ -1.23
CDC42BPA-206ENST00000429440 IGFLR1Q9H665 355 aa7.37□□□□□ -1.23
CDC42BPA-206ENST00000429440 HEBP2Q9Y5Z4 205 aa7.37□□□□□ -1.23
CDC42BPA-206ENST00000429440 NCOA6Q14686 2063 aaPredicted RBP7.37□□□□□ -1.23
CDC42BPA-206ENST00000429440 LAMA1P25391 3075 aa7.37□□□□□ -1.23
CDC42BPA-206ENST00000429440 IGHV1-24A0A0C4DH33 117 aa7.37□□□□□ -1.23
CDC42BPA-206ENST00000429440 A0A1W2PQM1 296 aa7.37□□□□□ -1.23
CDC42BPA-206ENST00000429440 H0Y8X5 98 aa7.37□□□□□ -1.23
CDC42BPA-206ENST00000429440 M0QXV9 152 aa7.37□□□□□ -1.23
CDC42BPA-206ENST00000429440 NTF4P34130 210 aa7.37□□□□□ -1.23
CDC42BPA-206ENST00000429440 KIR2DS4P43632 304 aa7.37□□□□□ -1.23
CDC42BPA-206ENST00000429440 ZXDAP98168 799 aa7.37□□□□□ -1.23
CDC42BPA-206ENST00000429440 VWC2Q2TAL6 325 aa7.37□□□□□ -1.23
CDC42BPA-206ENST00000429440 DEFB134Q4QY38 66 aa7.37□□□□□ -1.23
CDC42BPA-206ENST00000429440 Q6ZRM9 215 aa7.37□□□□□ -1.23
CDC42BPA-206ENST00000429440 SH2D6Q7Z4S9 175 aa7.37□□□□□ -1.23
CDC42BPA-206ENST00000429440 SPEM1Q8N4L4 309 aa7.37□□□□□ -1.23
CDC42BPA-206ENST00000429440 SYT8Q8NBV8 401 aa7.37□□□□□ -1.23
CDC42BPA-206ENST00000429440 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.37□□□□□ -1.23
CDC42BPA-206ENST00000429440 CCL4L1Q8NHW4 92 aa7.37□□□□□ -1.23
CDC42BPA-206ENST00000429440 ELSPBP1Q96BH3 223 aa7.37□□□□□ -1.23
CDC42BPA-206ENST00000429440 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.37□□□□□ -1.23
CDC42BPA-206ENST00000429440 MBNL3Q9NUK0 354 aaKnown RBP7.37□□□□□ -1.23
CDC42BPA-206ENST00000429440 MED29Q9NX70 200 aa7.37□□□□□ -1.23
CDC42BPA-206ENST00000429440 CACNG5Q9UF02 275 aa7.37□□□□□ -1.23
CDC42BPA-206ENST00000429440 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.36□□□□□ -1.23
CDC42BPA-206ENST00000429440 PRSS38A1L453 326 aa7.36□□□□□ -1.23
CDC42BPA-206ENST00000429440 FOXH1O75593 365 aa7.36□□□□□ -1.23
CDC42BPA-206ENST00000429440 CELA2BP08218 269 aaPredicted RBP7.36□□□□□ -1.23
CDC42BPA-206ENST00000429440 PLA2G5P39877 138 aa7.36□□□□□ -1.23
CDC42BPA-206ENST00000429440 FUT7Q11130 342 aa7.36□□□□□ -1.23
CDC42BPA-206ENST00000429440 CR1LQ2VPA4 569 aa7.36□□□□□ -1.23
CDC42BPA-206ENST00000429440 ZNF718Q3SXZ3 478 aa7.36□□□□□ -1.23
CDC42BPA-206ENST00000429440 Q6AWC8 147 aa7.36□□□□□ -1.23
CDC42BPA-206ENST00000429440 GLMPQ8WWB7 406 aa7.36□□□□□ -1.23
CDC42BPA-206ENST00000429440 OR1A1Q9P1Q5 309 aa7.36□□□□□ -1.23
CDC42BPA-206ENST00000429440 KNL1Q8NG31 2342 aa7.36□□□□□ -1.23
CDC42BPA-206ENST00000429440 CENPVL3A0A0U1RRI6 287 aa7.36□□□□□ -1.23
CDC42BPA-206ENST00000429440 NPIPB13A6NJU9 1138 aa7.36□□□□□ -1.23
CDC42BPA-206ENST00000429440 C21orf140B9A014 251 aa7.36□□□□□ -1.23
CDC42BPA-206ENST00000429440 NPIPB4C9JG80 1138 aa7.36□□□□□ -1.23
CDC42BPA-206ENST00000429440 C3orf80F5H4A9 247 aa7.36□□□□□ -1.23
CDC42BPA-206ENST00000429440 PGLYRP1O75594 196 aaPredicted RBP7.36□□□□□ -1.23
CDC42BPA-206ENST00000429440 TUSC2O75896 110 aa7.36□□□□□ -1.23
CDC42BPA-206ENST00000429440 CXorf1O96002 111 aa7.36□□□□□ -1.23
CDC42BPA-206ENST00000429440 CT45A10P0DMU9 189 aa7.36□□□□□ -1.23
CDC42BPA-206ENST00000429440 AREGP15514 252 aa7.36□□□□□ -1.23
CDC42BPA-206ENST00000429440 XGP55808 180 aa7.36□□□□□ -1.23
CDC42BPA-206ENST00000429440 TMPRSS3P57727 454 aa7.36□□□□□ -1.23
CDC42BPA-206ENST00000429440 RPL8P62917 257 aaKnown RBP7.36□□□□□ -1.23
CDC42BPA-206ENST00000429440 FOXI1Q12951 378 aa7.36□□□□□ -1.23
CDC42BPA-206ENST00000429440 CATR1Q13166 79 aa7.36□□□□□ -1.23
CDC42BPA-206ENST00000429440 ACP7Q6ZNF0 438 aa7.36□□□□□ -1.23
CDC42BPA-206ENST00000429440 YAF2Q8IY57 180 aa7.36□□□□□ -1.23
CDC42BPA-206ENST00000429440 PRR22Q8IZ63 422 aa7.36□□□□□ -1.23
CDC42BPA-206ENST00000429440 TEX29Q8N6K0 151 aa7.36□□□□□ -1.23
CDC42BPA-206ENST00000429440 BCORP1Q8N888 145 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms