RNA–Protein interactions for RNA: ENST00000423941.5

HDAC6-205, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-205ENST00000423941 CCR6P51684 374 aa14.29□□□□□ -0.12
HDAC6-205ENST00000423941 TPPP2P59282 170 aa14.29□□□□□ -0.12
HDAC6-205ENST00000423941 AARDQ4LEZ3 155 aa14.29□□□□□ -0.12
HDAC6-205ENST00000423941 ZNF429Q86V71 674 aa14.29□□□□□ -0.12
HDAC6-205ENST00000423941 MRPL41Q8IXM3 137 aaKnown RBP14.29□□□□□ -0.12
HDAC6-205ENST00000423941 SELENOHQ8IZQ5 122 aaKnown RBP14.29□□□□□ -0.12
HDAC6-205ENST00000423941 RBPMSQ93062 196 aaKnown RBP14.29□□□□□ -0.12
HDAC6-205ENST00000423941 IL22RA2Q969J5 263 aa14.29□□□□□ -0.12
HDAC6-205ENST00000423941 FANCD2OSQ96PS1 177 aa14.29□□□□□ -0.12
HDAC6-205ENST00000423941 FYTTD1Q96QD9 318 aaKnown RBP14.29□□□□□ -0.12
HDAC6-205ENST00000423941 CMYA5Q8N3K9 4069 aa14.29□□□□□ -0.12
HDAC6-205ENST00000423941 A0A0B4J293 547 aa14.28□□□□□ -0.12
HDAC6-205ENST00000423941 A0A0G2JLM5 398 aa14.28□□□□□ -0.12
HDAC6-205ENST00000423941 A0A0G2JRQ6 117 aa14.28□□□□□ -0.12
HDAC6-205ENST00000423941 LGALS1P09382 135 aaKnown RBP14.28□□□□□ -0.12
HDAC6-205ENST00000423941 TRAPPC2P0DI81 140 aa14.28□□□□□ -0.12
HDAC6-205ENST00000423941 TRAPPC2BP0DI82 140 aa14.28□□□□□ -0.12
HDAC6-205ENST00000423941 TRIM16LQ309B1 348 aa14.28□□□□□ -0.12
HDAC6-205ENST00000423941 HSD17B13Q7Z5P4 300 aaPredicted RBP14.28□□□□□ -0.12
HDAC6-205ENST00000423941 FAM219AQ8IW50 185 aa14.28□□□□□ -0.12
HDAC6-205ENST00000423941 OR10W1Q8NGF6 305 aa14.28□□□□□ -0.12
HDAC6-205ENST00000423941 USMG5Q96IX5 58 aa14.28□□□□□ -0.12
HDAC6-205ENST00000423941 COA4Q9NYJ1 87 aa14.28□□□□□ -0.12
HDAC6-205ENST00000423941 OR51B2Q9Y5P1 312 aa14.28□□□□□ -0.12
HDAC6-205ENST00000423941 CENPXA8MT69 81 aa14.27□□□□□ -0.13
HDAC6-205ENST00000423941 AKR1C4P17516 323 aa14.27□□□□□ -0.13
HDAC6-205ENST00000423941 WT1-ASQ06250 92 aa14.27□□□□□ -0.13
HDAC6-205ENST00000423941 IZUMO4Q1ZYL8 232 aa14.27□□□□□ -0.13
HDAC6-205ENST00000423941 DEFB136Q30KP8 78 aa14.27□□□□□ -0.13
HDAC6-205ENST00000423941 ZNF343Q6P1L6 599 aa14.27□□□□□ -0.13
HDAC6-205ENST00000423941 Q6ZRM9 215 aa14.27□□□□□ -0.13
HDAC6-205ENST00000423941 ZNF355PQ9NSJ1 428 aa14.27□□□□□ -0.13
HDAC6-205ENST00000423941 FAM223BA6NKX1 122 aa14.26□□□□□ -0.13
HDAC6-205ENST00000423941 LYRM1O43325 122 aa14.26□□□□□ -0.13
HDAC6-205ENST00000423941 PF4P02776 101 aa14.26□□□□□ -0.13
HDAC6-205ENST00000423941 UBE2MP61081 183 aaKnown RBP14.26□□□□□ -0.13
HDAC6-205ENST00000423941 HSPE1P61604 102 aaKnown RBP14.26□□□□□ -0.13
HDAC6-205ENST00000423941 ZNF846Q147U1 533 aa14.26□□□□□ -0.13
HDAC6-205ENST00000423941 FAM223AQ8IWN6 122 aa14.26□□□□□ -0.13
HDAC6-205ENST00000423941 LRTM2Q8N967 370 aa14.26□□□□□ -0.13
HDAC6-205ENST00000423941 NECAP1Q8NC96 275 aa14.26□□□□□ -0.13
HDAC6-205ENST00000423941 OR11H1Q8NG94 326 aa14.26□□□□□ -0.13
HDAC6-205ENST00000423941 OR4A16Q8NH70 328 aa14.26□□□□□ -0.13
HDAC6-205ENST00000423941 LSM10Q969L4 123 aaKnown RBP14.26□□□□□ -0.13
HDAC6-205ENST00000423941 DUX3Q96PT4 197 aa14.26□□□□□ -0.13
HDAC6-205ENST00000423941 WDR12Q9GZL7 423 aaKnown RBP14.26□□□□□ -0.13
HDAC6-205ENST00000423941 LINC00854A0A1B0GVQ3 168 aa14.25□□□□□ -0.13
HDAC6-205ENST00000423941 INS-IGF2F8WCM5 200 aa14.25□□□□□ -0.13
HDAC6-205ENST00000423941 PRH1P02810 166 aa14.25□□□□□ -0.13
HDAC6-205ENST00000423941 AKR1C2P52895 323 aa14.25□□□□□ -0.13
HDAC6-205ENST00000423941 RHOGP84095 191 aa14.25□□□□□ -0.13
HDAC6-205ENST00000423941 TMEM268Q5VZI3 342 aa14.25□□□□□ -0.13
HDAC6-205ENST00000423941 C19orf35Q6ZS72 473 aa14.25□□□□□ -0.13
HDAC6-205ENST00000423941 TMED4Q7Z7H5 227 aa14.25□□□□□ -0.13
HDAC6-205ENST00000423941 CENPSQ8N2Z9 138 aa14.25□□□□□ -0.13
HDAC6-205ENST00000423941 OR1N2Q8NGR9 330 aa14.25□□□□□ -0.13
HDAC6-205ENST00000423941 RRNAD1Q96FB5 475 aaKnown RBP14.25□□□□□ -0.13
HDAC6-205ENST00000423941 ALX4Q9H161 411 aaPredicted RBP14.25□□□□□ -0.13
HDAC6-205ENST00000423941 DMRT1Q9Y5R6 373 aa14.25□□□□□ -0.13
HDAC6-205ENST00000423941 IGLV11-55A0A075B6I3 123 aa14.24□□□□□ -0.13
HDAC6-205ENST00000423941 A0A0B4J2A0 478 aa14.24□□□□□ -0.13
HDAC6-205ENST00000423941 HSPB1P04792 205 aaKnown RBP14.24□□□□□ -0.13
HDAC6-205ENST00000423941 PRCDQ00LT1 54 aa14.24□□□□□ -0.13
HDAC6-205ENST00000423941 ZNF616Q08AN1 781 aa14.24□□□□□ -0.13
HDAC6-205ENST00000423941 PDLIM3Q53GG5 364 aaPredicted RBP14.24□□□□□ -0.13
HDAC6-205ENST00000423941 SAMD5Q5TGI4 173 aa14.24□□□□□ -0.13
HDAC6-205ENST00000423941 GPR146Q96CH1 333 aa14.24□□□□□ -0.13
HDAC6-205ENST00000423941 OR5B12Q96R08 314 aa14.24□□□□□ -0.13
HDAC6-205ENST00000423941 SHPKQ9UHJ6 478 aa14.24□□□□□ -0.13
HDAC6-205ENST00000423941 FLVCR2Q9UPI3 526 aa14.24□□□□□ -0.13
HDAC6-205ENST00000423941 C13orf42A0A1B0GVH6 325 aa14.23□□□□□ -0.13
HDAC6-205ENST00000423941 UPK1BO75841 260 aa14.23□□□□□ -0.13
HDAC6-205ENST00000423941 SFT2D2O95562 160 aa14.23□□□□□ -0.13
HDAC6-205ENST00000423941 DHFRP00374 187 aa14.23□□□□□ -0.13
HDAC6-205ENST00000423941 IGHV3-11P01762 117 aa14.23□□□□□ -0.13
HDAC6-205ENST00000423941 REG1AP05451 166 aa14.23□□□□□ -0.13
HDAC6-205ENST00000423941 OR13C7P0DN81 318 aa14.23□□□□□ -0.13
HDAC6-205ENST00000423941 ANXA3P12429 323 aa14.23□□□□□ -0.13
HDAC6-205ENST00000423941 HIST1H1BP16401 226 aaKnown RBP14.23□□□□□ -0.13
HDAC6-205ENST00000423941 SRPXP78539 464 aa14.23□□□□□ -0.13
HDAC6-205ENST00000423941 IFITM3Q01628 133 aa14.23□□□□□ -0.13
HDAC6-205ENST00000423941 PPP1R1AQ13522 171 aa14.23□□□□□ -0.13
HDAC6-205ENST00000423941 NMSQ5H8A3 153 aa14.23□□□□□ -0.13
HDAC6-205ENST00000423941 LGI3Q8N145 548 aa14.23□□□□□ -0.13
HDAC6-205ENST00000423941 SLC35G3Q8N808 338 aa14.23□□□□□ -0.13
HDAC6-205ENST00000423941 PRR13Q9NZ81 148 aa14.23□□□□□ -0.13
HDAC6-205ENST00000423941 TBC1D24Q9ULP9 559 aa14.23□□□□□ -0.13
HDAC6-205ENST00000423941 PIGBOS1A0A0B4J2F0 54 aa14.22□□□□□ -0.13
HDAC6-205ENST00000423941 DUXBA0A1W2PPF3 345 aa14.22□□□□□ -0.13
HDAC6-205ENST00000423941 ST8SIA3O43173 380 aa14.22□□□□□ -0.13
HDAC6-205ENST00000423941 CD33P20138 364 aa14.22□□□□□ -0.13
HDAC6-205ENST00000423941 MFAP2P55001 183 aa14.22□□□□□ -0.13
HDAC6-205ENST00000423941 ASAH1Q13510 395 aa14.22□□□□□ -0.13
HDAC6-205ENST00000423941 ANKRD55Q3KP44 614 aa14.22□□□□□ -0.13
HDAC6-205ENST00000423941 LYZL2Q7Z4W2 148 aa14.22□□□□□ -0.13
HDAC6-205ENST00000423941 OR2C3Q8N628 320 aa14.22□□□□□ -0.13
HDAC6-205ENST00000423941 OR52E5Q8NH55 327 aa14.22□□□□□ -0.13
HDAC6-205ENST00000423941 RCC1LQ96I51 464 aaKnown RBP14.22□□□□□ -0.13
HDAC6-205ENST00000423941 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.22□□□□□ -0.13
HDAC6-205ENST00000423941 FBXL7Q9UJT9 491 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms