RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 PSMB6P28072 239 aa12.23□□□□□ -0.45
BRAT1-202ENST00000421712 DEFA5Q01523 94 aa12.23□□□□□ -0.45
BRAT1-202ENST00000421712 SELENOHQ8IZQ5 122 aaKnown RBP12.23□□□□□ -0.45
BRAT1-202ENST00000421712 CENPSQ8N2Z9 138 aa12.23□□□□□ -0.45
BRAT1-202ENST00000421712 OR10W1Q8NGF6 305 aa12.23□□□□□ -0.45
BRAT1-202ENST00000421712 OR1N2Q8NGR9 330 aa12.23□□□□□ -0.45
BRAT1-202ENST00000421712 RBPMSQ93062 196 aaKnown RBP12.23□□□□□ -0.45
BRAT1-202ENST00000421712 TMEM56Q96MV1 263 aa12.23□□□□□ -0.45
BRAT1-202ENST00000421712 ALX4Q9H161 411 aaPredicted RBP12.23□□□□□ -0.45
BRAT1-202ENST00000421712 PRR13Q9NZ81 148 aa12.23□□□□□ -0.45
BRAT1-202ENST00000421712 CGB1A6NKQ9 187 aa12.22□□□□□ -0.45
BRAT1-202ENST00000421712 NPIPB5A8MRT5 1133 aa12.22□□□□□ -0.45
BRAT1-202ENST00000421712 I3L521 148 aa12.22□□□□□ -0.45
BRAT1-202ENST00000421712 LGALS1P09382 135 aaKnown RBP12.22□□□□□ -0.45
BRAT1-202ENST00000421712 VAMP1P23763 118 aa12.22□□□□□ -0.45
BRAT1-202ENST00000421712 RHOGP84095 191 aa12.22□□□□□ -0.45
BRAT1-202ENST00000421712 ATP5G2Q06055 141 aa12.22□□□□□ -0.45
BRAT1-202ENST00000421712 TMEM187Q14656 261 aa12.22□□□□□ -0.45
BRAT1-202ENST00000421712 TMEM128Q5BJH2 165 aa12.22□□□□□ -0.45
BRAT1-202ENST00000421712 THOC7Q6I9Y2 204 aaKnown RBP12.22□□□□□ -0.45
BRAT1-202ENST00000421712 ETV3LQ6ZN32 361 aa12.22□□□□□ -0.45
BRAT1-202ENST00000421712 MRPL41Q8IXM3 137 aaKnown RBP12.22□□□□□ -0.45
BRAT1-202ENST00000421712 OR5B3Q8NH48 314 aa12.22□□□□□ -0.45
BRAT1-202ENST00000421712 GALNT14Q96FL9 552 aa12.22□□□□□ -0.45
BRAT1-202ENST00000421712 USMG5Q96IX5 58 aa12.22□□□□□ -0.45
BRAT1-202ENST00000421712 SRSF8Q9BRL6 282 aaKnown RBP12.22□□□□□ -0.45
BRAT1-202ENST00000421712 PDCD10Q9BUL8 212 aa12.22□□□□□ -0.45
BRAT1-202ENST00000421712 NDUFA4L2Q9NRX3 87 aa12.22□□□□□ -0.45
BRAT1-202ENST00000421712 TMEM14BQ9NUH8 114 aa12.22□□□□□ -0.45
BRAT1-202ENST00000421712 IGLC7A0M8Q6 106 aa12.21□□□□□ -0.45
BRAT1-202ENST00000421712 ANKRD34BA5PLL1 514 aa12.21□□□□□ -0.45
BRAT1-202ENST00000421712 DBX1A6NMT0 343 aa12.21□□□□□ -0.45
BRAT1-202ENST00000421712 LYRM1O43325 122 aa12.21□□□□□ -0.45
BRAT1-202ENST00000421712 OR2J3O76001 311 aa12.21□□□□□ -0.45
BRAT1-202ENST00000421712 NDUFB6O95139 128 aa12.21□□□□□ -0.45
BRAT1-202ENST00000421712 BRI3O95415 125 aa12.21□□□□□ -0.45
BRAT1-202ENST00000421712 IFNA17P01571 189 aa12.21□□□□□ -0.45
BRAT1-202ENST00000421712 CRYGCP07315 174 aa12.21□□□□□ -0.45
BRAT1-202ENST00000421712 OR13C7P0DN81 318 aa12.21□□□□□ -0.45
BRAT1-202ENST00000421712 CTRB1P17538 263 aa12.21□□□□□ -0.45
BRAT1-202ENST00000421712 RUNX1Q01196 453 aa12.21□□□□□ -0.45
BRAT1-202ENST00000421712 ZNF616Q08AN1 781 aa12.21□□□□□ -0.45
BRAT1-202ENST00000421712 CTRB2Q6GPI1 263 aa12.21□□□□□ -0.45
BRAT1-202ENST00000421712 C19orf35Q6ZS72 473 aa12.21□□□□□ -0.45
BRAT1-202ENST00000421712 HSD17B13Q7Z5P4 300 aaPredicted RBP12.21□□□□□ -0.45
BRAT1-202ENST00000421712 LGI3Q8N145 548 aa12.21□□□□□ -0.45
BRAT1-202ENST00000421712 LHFPL5Q8TAF8 219 aa12.21□□□□□ -0.45
BRAT1-202ENST00000421712 LSM10Q969L4 123 aaKnown RBP12.21□□□□□ -0.45
BRAT1-202ENST00000421712 P2RX4Q99571 388 aa12.21□□□□□ -0.45
BRAT1-202ENST00000421712 FBXL7Q9UJT9 491 aa12.21□□□□□ -0.45
BRAT1-202ENST00000421712 FAM223BA6NKX1 122 aa12.2□□□□□ -0.46
BRAT1-202ENST00000421712 PLA2G10O15496 165 aa12.2□□□□□ -0.46
BRAT1-202ENST00000421712 CYB5BO43169 146 aa12.2□□□□□ -0.46
BRAT1-202ENST00000421712 HSPB1P04792 205 aaKnown RBP12.2□□□□□ -0.46
BRAT1-202ENST00000421712 HSPE1P61604 102 aaKnown RBP12.2□□□□□ -0.46
BRAT1-202ENST00000421712 SUPT4H1P63272 117 aaKnown RBP12.2□□□□□ -0.46
BRAT1-202ENST00000421712 SRPXP78539 464 aa12.2□□□□□ -0.46
BRAT1-202ENST00000421712 SLC25A24Q6NUK1 477 aa12.2□□□□□ -0.46
BRAT1-202ENST00000421712 FAM219AQ8IW50 185 aa12.2□□□□□ -0.46
BRAT1-202ENST00000421712 FAM223AQ8IWN6 122 aa12.2□□□□□ -0.46
BRAT1-202ENST00000421712 LINC00482Q8N8I6 264 aa12.2□□□□□ -0.46
BRAT1-202ENST00000421712 NECAP1Q8NC96 275 aa12.2□□□□□ -0.46
BRAT1-202ENST00000421712 FLVCR2Q9UPI3 526 aa12.2□□□□□ -0.46
BRAT1-202ENST00000421712 TMEM56-RWDD3S4R434 201 aa12.2□□□□□ -0.46
BRAT1-202ENST00000421712 TRBV9A0A0B4J1U6 114 aa12.19□□□□□ -0.46
BRAT1-202ENST00000421712 A0A0B4J293 547 aa12.19□□□□□ -0.46
BRAT1-202ENST00000421712 PIGBOS1A0A0B4J2F0 54 aa12.19□□□□□ -0.46
BRAT1-202ENST00000421712 A0A0G2JRQ6 117 aa12.19□□□□□ -0.46
BRAT1-202ENST00000421712 LINC01619G3V211 115 aa12.19□□□□□ -0.46
BRAT1-202ENST00000421712 ST8SIA3O43173 380 aa12.19□□□□□ -0.46
BRAT1-202ENST00000421712 OR8U8P0C7N1 319 aa12.19□□□□□ -0.46
BRAT1-202ENST00000421712 IGLL1P15814 213 aa12.19□□□□□ -0.46
BRAT1-202ENST00000421712 HIST1H1BP16401 226 aaKnown RBP12.19□□□□□ -0.46
BRAT1-202ENST00000421712 C15orf32Q32M92 178 aa12.19□□□□□ -0.46
BRAT1-202ENST00000421712 SPINK9Q5DT21 86 aa12.19□□□□□ -0.46
BRAT1-202ENST00000421712 MZT2BQ6NZ67 158 aa12.19□□□□□ -0.46
BRAT1-202ENST00000421712 C1QL4Q86Z23 238 aa12.19□□□□□ -0.46
BRAT1-202ENST00000421712 SLC35G3Q8N808 338 aa12.19□□□□□ -0.46
BRAT1-202ENST00000421712 WFDC9Q8NEX5 89 aa12.19□□□□□ -0.46
BRAT1-202ENST00000421712 IL22RA2Q969J5 263 aa12.19□□□□□ -0.46
BRAT1-202ENST00000421712 GPR146Q96CH1 333 aa12.19□□□□□ -0.46
BRAT1-202ENST00000421712 PLEKHA3Q9HB20 300 aa12.19□□□□□ -0.46
BRAT1-202ENST00000421712 ENY2Q9NPA8 101 aa12.19□□□□□ -0.46
BRAT1-202ENST00000421712 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.19□□□□□ -0.46
BRAT1-202ENST00000421712 IGHV4OR15-8A0A075B7B6 117 aa12.18□□□□□ -0.46
BRAT1-202ENST00000421712 A0A087WW49 117 aa12.18□□□□□ -0.46
BRAT1-202ENST00000421712 SFT2D2O95562 160 aa12.18□□□□□ -0.46
BRAT1-202ENST00000421712 P0C879 139 aa12.18□□□□□ -0.46
BRAT1-202ENST00000421712 BTCP35070 178 aa12.18□□□□□ -0.46
BRAT1-202ENST00000421712 ERHP84090 104 aaKnown RBP12.18□□□□□ -0.46
BRAT1-202ENST00000421712 PRCDQ00LT1 54 aa12.18□□□□□ -0.46
BRAT1-202ENST00000421712 WT1-ASQ06250 92 aa12.18□□□□□ -0.46
BRAT1-202ENST00000421712 PPP1R1AQ13522 171 aa12.18□□□□□ -0.46
BRAT1-202ENST00000421712 EXOSC2Q13868 293 aaKnown RBP12.18□□□□□ -0.46
BRAT1-202ENST00000421712 OXLD1Q5BKU9 147 aa12.18□□□□□ -0.46
BRAT1-202ENST00000421712 LYZL2Q7Z4W2 148 aa12.18□□□□□ -0.46
BRAT1-202ENST00000421712 ZNF429Q86V71 674 aa12.18□□□□□ -0.46
BRAT1-202ENST00000421712 FANCD2OSQ96PS1 177 aa12.18□□□□□ -0.46
BRAT1-202ENST00000421712 RANGRFQ9HD47 186 aaPredicted RBP12.18□□□□□ -0.46
BRAT1-202ENST00000421712 THYN1Q9P016 225 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms