RNA–Protein interactions for RNA: ENST00000420717.5

PTPN18-204, Transcript of protein tyrosine phosphatase, non-receptor type 18, human

TSL 3

Gene PTPN18, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN18-204	ENST00000420717	OR5T1	Q8NG75	326 aa		11.17	□□□□□ -0.62
PTPN18-204	ENST00000420717	OR1L8	Q8NGR8	309 aa		11.17	□□□□□ -0.62
PTPN18-204	ENST00000420717	LHFPL5	Q8TAF8	219 aa		11.17	□□□□□ -0.62
PTPN18-204	ENST00000420717	RBPMS	Q93062	196 aa	Known RBP	11.17	□□□□□ -0.62
PTPN18-204	ENST00000420717	FYTTD1	Q96QD9	318 aa	Known RBP	11.17	□□□□□ -0.62
PTPN18-204	ENST00000420717	PIGBOS1	A0A0B4J2F0	54 aa		11.16	□□□□□ -0.62
PTPN18-204	ENST00000420717	HMX3	A6NHT5	357 aa		11.16	□□□□□ -0.62
PTPN18-204	ENST00000420717	DBX1	A6NMT0	343 aa		11.16	□□□□□ -0.62
PTPN18-204	ENST00000420717	INS-IGF2	F8WCM5	200 aa		11.16	□□□□□ -0.62
PTPN18-204	ENST00000420717	RBMXL2	O75526	392 aa	Known RBP	11.16	□□□□□ -0.62
PTPN18-204	ENST00000420717	NDUFB6	O95139	128 aa		11.16	□□□□□ -0.62
PTPN18-204	ENST00000420717	TRAPPC2	P0DI81	140 aa		11.16	□□□□□ -0.62
PTPN18-204	ENST00000420717	TRAPPC2B	P0DI82	140 aa		11.16	□□□□□ -0.62
PTPN18-204	ENST00000420717	AREG	P15514	252 aa		11.16	□□□□□ -0.62
PTPN18-204	ENST00000420717	INPP1	P49441	399 aa		11.16	□□□□□ -0.62
PTPN18-204	ENST00000420717	SRPX	P78539	464 aa		11.16	□□□□□ -0.62
PTPN18-204	ENST00000420717	TMEM187	Q14656	261 aa		11.16	□□□□□ -0.62
PTPN18-204	ENST00000420717	TRIM16L	Q309B1	348 aa		11.16	□□□□□ -0.62
PTPN18-204	ENST00000420717	SP6	Q3SY56	376 aa		11.16	□□□□□ -0.62
PTPN18-204	ENST00000420717	TMEM128	Q5BJH2	165 aa		11.16	□□□□□ -0.62
PTPN18-204	ENST00000420717	SAMD5	Q5TGI4	173 aa		11.16	□□□□□ -0.62
PTPN18-204	ENST00000420717	NECAP1	Q8NC96	275 aa		11.16	□□□□□ -0.62
PTPN18-204	ENST00000420717	CASTOR1	Q8WTX7	329 aa		11.16	□□□□□ -0.62
PTPN18-204	ENST00000420717	LSM10	Q969L4	123 aa	Known RBP	11.16	□□□□□ -0.62
PTPN18-204	ENST00000420717	RCC1L	Q96I51	464 aa	Known RBP	11.16	□□□□□ -0.62
PTPN18-204	ENST00000420717	COA4	Q9NYJ1	87 aa		11.16	□□□□□ -0.62
PTPN18-204	ENST00000420717	OR51B2	Q9Y5P1	312 aa		11.16	□□□□□ -0.62
PTPN18-204	ENST00000420717	IGLV11-55	A0A075B6I3	123 aa		11.15	□□□□□ -0.62
PTPN18-204	ENST00000420717	CENPX	A8MT69	81 aa		11.15	□□□□□ -0.62
PTPN18-204	ENST00000420717	WIPF1	O43516	503 aa		11.15	□□□□□ -0.62
PTPN18-204	ENST00000420717	DUS4L	O95620	317 aa	Known RBP	11.15	□□□□□ -0.62
PTPN18-204	ENST00000420717	DHFR	P00374	187 aa		11.15	□□□□□ -0.62
PTPN18-204	ENST00000420717	OR8U8	P0C7N1	319 aa		11.15	□□□□□ -0.62
PTPN18-204	ENST00000420717	APELA	P0DMC3	54 aa		11.15	□□□□□ -0.62
PTPN18-204	ENST00000420717	HIST1H1B	P16401	226 aa	Known RBP	11.15	□□□□□ -0.62
PTPN18-204	ENST00000420717	AKR1C2	P52895	323 aa		11.15	□□□□□ -0.62
PTPN18-204	ENST00000420717	PRCD	Q00LT1	54 aa		11.15	□□□□□ -0.62
PTPN18-204	ENST00000420717	WT1-AS	Q06250	92 aa		11.15	□□□□□ -0.62
PTPN18-204	ENST00000420717	ZNF616	Q08AN1	781 aa		11.15	□□□□□ -0.62
PTPN18-204	ENST00000420717	DEFB136	Q30KP8	78 aa		11.15	□□□□□ -0.62
PTPN18-204	ENST00000420717	PDLIM3	Q53GG5	364 aa	Predicted RBP	11.15	□□□□□ -0.62
PTPN18-204	ENST00000420717	FAM209B	Q5JX69	171 aa		11.15	□□□□□ -0.62
PTPN18-204	ENST00000420717	ZNF343	Q6P1L6	599 aa		11.15	□□□□□ -0.62
PTPN18-204	ENST00000420717	SELENOH	Q8IZQ5	122 aa	Known RBP	11.15	□□□□□ -0.62
PTPN18-204	ENST00000420717	LRTM2	Q8N967	370 aa		11.15	□□□□□ -0.62
PTPN18-204	ENST00000420717	MS4A10	Q96PG2	267 aa		11.15	□□□□□ -0.62
PTPN18-204	ENST00000420717	FANCD2OS	Q96PS1	177 aa		11.15	□□□□□ -0.62
PTPN18-204	ENST00000420717	WDR12	Q9GZL7	423 aa	Known RBP	11.15	□□□□□ -0.62
PTPN18-204	ENST00000420717	KCNIP3	Q9Y2W7	256 aa		11.15	□□□□□ -0.62
PTPN18-204	ENST00000420717	NOTCH3	Q9UM47	2321 aa		11.14	□□□□□ -0.63
PTPN18-204	ENST00000420717	DNAH3	Q8TD57	4116 aa		11.14	□□□□□ -0.63
PTPN18-204	ENST00000420717		A0A0B4J293	547 aa		11.14	□□□□□ -0.63
PTPN18-204	ENST00000420717		A0A0G2JRQ6	117 aa		11.14	□□□□□ -0.63
PTPN18-204	ENST00000420717	DUXB	A0A1W2PPF3	345 aa		11.14	□□□□□ -0.63
PTPN18-204	ENST00000420717	PLA2G10	O15496	165 aa		11.14	□□□□□ -0.63
PTPN18-204	ENST00000420717	ANXA3	P12429	323 aa		11.14	□□□□□ -0.63
PTPN18-204	ENST00000420717	RHOG	P84095	191 aa		11.14	□□□□□ -0.63
PTPN18-204	ENST00000420717	ZNF114	Q8NC26	417 aa		11.14	□□□□□ -0.63
PTPN18-204	ENST00000420717	OR11H1	Q8NG94	326 aa		11.14	□□□□□ -0.63
PTPN18-204	ENST00000420717	OR4A16	Q8NH70	328 aa		11.14	□□□□□ -0.63
PTPN18-204	ENST00000420717	NSG2	Q9Y328	171 aa		11.14	□□□□□ -0.63
PTPN18-204	ENST00000420717		A0A0B4J2A0	478 aa		11.13	□□□□□ -0.63
PTPN18-204	ENST00000420717	C13orf42	A0A1B0GVH6	325 aa		11.13	□□□□□ -0.63
PTPN18-204	ENST00000420717	CD33	P20138	364 aa		11.13	□□□□□ -0.63
PTPN18-204	ENST00000420717	CCR6	P51684	374 aa		11.13	□□□□□ -0.63
PTPN18-204	ENST00000420717	HSPE1	P61604	102 aa	Known RBP	11.13	□□□□□ -0.63
PTPN18-204	ENST00000420717	TMEM268	Q5VZI3	342 aa		11.13	□□□□□ -0.63
PTPN18-204	ENST00000420717	CENPS	Q8N2Z9	138 aa		11.13	□□□□□ -0.63
PTPN18-204	ENST00000420717	OR10W1	Q8NGF6	305 aa		11.13	□□□□□ -0.63
PTPN18-204	ENST00000420717	OR1N2	Q8NGR9	330 aa		11.13	□□□□□ -0.63
PTPN18-204	ENST00000420717	OR52E5	Q8NH55	327 aa		11.13	□□□□□ -0.63
PTPN18-204	ENST00000420717	RRNAD1	Q96FB5	475 aa	Known RBP	11.13	□□□□□ -0.63
PTPN18-204	ENST00000420717	MCRIP2	Q9BUT9	160 aa	Known RBP	11.13	□□□□□ -0.63
PTPN18-204	ENST00000420717	GPR61	Q9BZJ8	451 aa		11.13	□□□□□ -0.63
PTPN18-204	ENST00000420717	ZNF355P	Q9NSJ1	428 aa		11.13	□□□□□ -0.63
PTPN18-204	ENST00000420717	SHPK	Q9UHJ6	478 aa		11.13	□□□□□ -0.63
PTPN18-204	ENST00000420717	LINC01619	G3V211	115 aa		11.12	□□□□□ -0.63
PTPN18-204	ENST00000420717	LYRM1	O43325	122 aa		11.12	□□□□□ -0.63
PTPN18-204	ENST00000420717	HSPB1	P04792	205 aa	Known RBP	11.12	□□□□□ -0.63
PTPN18-204	ENST00000420717	AKR1C4	P17516	323 aa		11.12	□□□□□ -0.63
PTPN18-204	ENST00000420717	ZNF846	Q147U1	533 aa		11.12	□□□□□ -0.63
PTPN18-204	ENST00000420717	NMS	Q5H8A3	153 aa		11.12	□□□□□ -0.63
PTPN18-204	ENST00000420717	SLC35G3	Q8N808	338 aa		11.12	□□□□□ -0.63
PTPN18-204	ENST00000420717	OR1L6	Q8NGR2	347 aa		11.12	□□□□□ -0.63
PTPN18-204	ENST00000420717	ATP6V0B	Q99437	205 aa		11.12	□□□□□ -0.63
PTPN18-204	ENST00000420717	ALX4	Q9H161	411 aa	Predicted RBP	11.12	□□□□□ -0.63
PTPN18-204	ENST00000420717	RANGRF	Q9HD47	186 aa	Predicted RBP	11.12	□□□□□ -0.63
PTPN18-204	ENST00000420717	CACFD1	Q9UGQ2	172 aa		11.12	□□□□□ -0.63
PTPN18-204	ENST00000420717	DMRT1	Q9Y5R6	373 aa		11.12	□□□□□ -0.63
PTPN18-204	ENST00000420717	F11R	Q9Y624	299 aa	Known RBP	11.12	□□□□□ -0.63
PTPN18-204	ENST00000420717	IGHV4OR15-8	A0A075B7B6	117 aa		11.11	□□□□□ -0.63
PTPN18-204	ENST00000420717		A0A087WW49	117 aa		11.11	□□□□□ -0.63
PTPN18-204	ENST00000420717	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	11.11	□□□□□ -0.63
PTPN18-204	ENST00000420717	ST8SIA3	O43173	380 aa		11.11	□□□□□ -0.63
PTPN18-204	ENST00000420717	IGHV3-11	P01762	117 aa		11.11	□□□□□ -0.63
PTPN18-204	ENST00000420717	PRH1	P02810	166 aa		11.11	□□□□□ -0.63
PTPN18-204	ENST00000420717	ASAH1	Q13510	395 aa		11.11	□□□□□ -0.63
PTPN18-204	ENST00000420717	PPP1R1A	Q13522	171 aa		11.11	□□□□□ -0.63
PTPN18-204	ENST00000420717	EXOSC2	Q13868	293 aa	Known RBP	11.11	□□□□□ -0.63
PTPN18-204	ENST00000420717	IZUMO4	Q1ZYL8	232 aa		11.11	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms