RNA–Protein interactions for RNA: ENST00000418436.5

RFC1-203, Transcript of replication factor C subunit 1, humanhuman

TSL 1 (best)

Gene RFC1, Length 1,255 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-203ENST00000418436 SRSF8Q9BRL6 282 aaKnown RBP8.13□□□□□ -1.11
RFC1-203ENST00000418436 COA4Q9NYJ1 87 aa8.13□□□□□ -1.11
RFC1-203ENST00000418436 ZNF257Q9Y2Q1 563 aa8.13□□□□□ -1.11
RFC1-203ENST00000418436 U3KQE9 123 aa8.13□□□□□ -1.11
RFC1-203ENST00000418436 A0A0G2JLM5 398 aa8.12□□□□□ -1.11
RFC1-203ENST00000418436 TEX50A0A1B0GTY4 177 aa8.12□□□□□ -1.11
RFC1-203ENST00000418436 RBMXL2O75526 392 aaKnown RBP8.12□□□□□ -1.11
RFC1-203ENST00000418436 SERPINE2P07093 398 aa8.12□□□□□ -1.11
RFC1-203ENST00000418436 P0C879 139 aa8.12□□□□□ -1.11
RFC1-203ENST00000418436 FAUP35544 74 aaKnown RBP8.12□□□□□ -1.11
RFC1-203ENST00000418436 BAK1Q16611 211 aa8.12□□□□□ -1.11
RFC1-203ENST00000418436 BEAN1Q3B7T3 259 aa8.12□□□□□ -1.11
RFC1-203ENST00000418436 LINC00299Q6ZSB3 139 aa8.12□□□□□ -1.11
RFC1-203ENST00000418436 OR1N2Q8NGR9 330 aa8.12□□□□□ -1.11
RFC1-203ENST00000418436 RCC1LQ96I51 464 aaKnown RBP8.12□□□□□ -1.11
RFC1-203ENST00000418436 USMG5Q96IX5 58 aa8.12□□□□□ -1.11
RFC1-203ENST00000418436 SCGB3A2Q96PL1 93 aa8.12□□□□□ -1.11
RFC1-203ENST00000418436 OR5B12Q96R08 314 aa8.12□□□□□ -1.11
RFC1-203ENST00000418436 TSC22D3Q99576 134 aa8.12□□□□□ -1.11
RFC1-203ENST00000418436 COMMD5Q9GZQ3 224 aa8.12□□□□□ -1.11
RFC1-203ENST00000418436 ALX4Q9H161 411 aaPredicted RBP8.12□□□□□ -1.11
RFC1-203ENST00000418436 NAA60Q9H7X0 242 aa8.12□□□□□ -1.11
RFC1-203ENST00000418436 NDUFA4L2Q9NRX3 87 aa8.12□□□□□ -1.11
RFC1-203ENST00000418436 ZNF355PQ9NSJ1 428 aa8.12□□□□□ -1.11
RFC1-203ENST00000418436 MCUBQ9NWR8 336 aa8.12□□□□□ -1.11
RFC1-203ENST00000418436 C14orf166Q9Y224 244 aaKnown RBP8.12□□□□□ -1.11
RFC1-203ENST00000418436 MEGF8Q7Z7M0 2845 aa8.11□□□□□ -1.11
RFC1-203ENST00000418436 TEX13DA0A0J9YY54 714 aaPredicted RBP8.11□□□□□ -1.11
RFC1-203ENST00000418436 IGLC7A0M8Q6 106 aa8.11□□□□□ -1.11
RFC1-203ENST00000418436 CRYM-AS1A6NIL9 109 aa8.11□□□□□ -1.11
RFC1-203ENST00000418436 DBX1A6NMT0 343 aa8.11□□□□□ -1.11
RFC1-203ENST00000418436 SNAPC5O75971 98 aa8.11□□□□□ -1.11
RFC1-203ENST00000418436 DUS4LO95620 317 aaKnown RBP8.11□□□□□ -1.11
RFC1-203ENST00000418436 CDS2O95674 445 aa8.11□□□□□ -1.11
RFC1-203ENST00000418436 IGKV1-5P01602 117 aa8.11□□□□□ -1.11
RFC1-203ENST00000418436 IGHV3-11P01762 117 aa8.11□□□□□ -1.11
RFC1-203ENST00000418436 HSPB1P04792 205 aaKnown RBP8.11□□□□□ -1.11
RFC1-203ENST00000418436 AREGP15514 252 aa8.11□□□□□ -1.11
RFC1-203ENST00000418436 IGLL1P15814 213 aa8.11□□□□□ -1.11
RFC1-203ENST00000418436 CTRB1P17538 263 aa8.11□□□□□ -1.11
RFC1-203ENST00000418436 PSMB6P28072 239 aa8.11□□□□□ -1.11
RFC1-203ENST00000418436 ZNF616Q08AN1 781 aa8.11□□□□□ -1.11
RFC1-203ENST00000418436 CNPY1Q3B7I2 92 aa8.11□□□□□ -1.11
RFC1-203ENST00000418436 SP6Q3SY56 376 aa8.11□□□□□ -1.11
RFC1-203ENST00000418436 CTRB2Q6GPI1 263 aa8.11□□□□□ -1.11
RFC1-203ENST00000418436 THOC7Q6I9Y2 204 aaKnown RBP8.11□□□□□ -1.11
RFC1-203ENST00000418436 ZNF343Q6P1L6 599 aa8.11□□□□□ -1.11
RFC1-203ENST00000418436 H2BFWTQ7Z2G1 175 aa8.11□□□□□ -1.11
RFC1-203ENST00000418436 OR1L8Q8NGR8 309 aa8.11□□□□□ -1.11
RFC1-203ENST00000418436 GLYATL2Q8WU03 294 aa8.11□□□□□ -1.11
RFC1-203ENST00000418436 TMEM230Q96A57 120 aa8.11□□□□□ -1.11
RFC1-203ENST00000418436 QTRT1Q9BXR0 403 aaKnown RBP8.11□□□□□ -1.11
RFC1-203ENST00000418436 TMEM222Q9H0R3 208 aa8.11□□□□□ -1.11
RFC1-203ENST00000418436 AKIP1Q9NQ31 210 aa8.11□□□□□ -1.11
RFC1-203ENST00000418436 TMEM14BQ9NUH8 114 aa8.11□□□□□ -1.11
RFC1-203ENST00000418436 FKBP11Q9NYL4 201 aa8.11□□□□□ -1.11
RFC1-203ENST00000418436 PRNDQ9UKY0 176 aa8.11□□□□□ -1.11
RFC1-203ENST00000418436 NSG2Q9Y328 171 aa8.11□□□□□ -1.11
RFC1-203ENST00000418436 NOTCH1P46531 2555 aa8.1□□□□□ -1.11
RFC1-203ENST00000418436 IGHV4OR15-8A0A075B7B6 117 aa8.1□□□□□ -1.11
RFC1-203ENST00000418436 A0A087WW49 117 aa8.1□□□□□ -1.11
RFC1-203ENST00000418436 C13orf42A0A1B0GVH6 325 aa8.1□□□□□ -1.11
RFC1-203ENST00000418436 FAM223BA6NKX1 122 aa8.1□□□□□ -1.11
RFC1-203ENST00000418436 C15orf61A6NNL5 157 aa8.1□□□□□ -1.11
RFC1-203ENST00000418436 LINC01619G3V211 115 aa8.1□□□□□ -1.11
RFC1-203ENST00000418436 PRH1P02810 166 aa8.1□□□□□ -1.11
RFC1-203ENST00000418436 OR5AC1P0C628 307 aa8.1□□□□□ -1.11
RFC1-203ENST00000418436 OR8U8P0C7N1 319 aa8.1□□□□□ -1.11
RFC1-203ENST00000418436 TRAPPC2P0DI81 140 aa8.1□□□□□ -1.11
RFC1-203ENST00000418436 TRAPPC2BP0DI82 140 aa8.1□□□□□ -1.11
RFC1-203ENST00000418436 RHOGP84095 191 aa8.1□□□□□ -1.11
RFC1-203ENST00000418436 DHODHQ02127 395 aa8.1□□□□□ -1.11
RFC1-203ENST00000418436 HSD17B13Q7Z5P4 300 aaPredicted RBP8.1□□□□□ -1.11
RFC1-203ENST00000418436 C1QL4Q86Z23 238 aa8.1□□□□□ -1.11
RFC1-203ENST00000418436 FAM223AQ8IWN6 122 aa8.1□□□□□ -1.11
RFC1-203ENST00000418436 NECAP1Q8NC96 275 aa8.1□□□□□ -1.11
RFC1-203ENST00000418436 OR10W1Q8NGF6 305 aa8.1□□□□□ -1.11
RFC1-203ENST00000418436 OR5B3Q8NH48 314 aa8.1□□□□□ -1.11
RFC1-203ENST00000418436 DPF1Q92782 380 aa8.1□□□□□ -1.11
RFC1-203ENST00000418436 GALNT14Q96FL9 552 aa8.1□□□□□ -1.11
RFC1-203ENST00000418436 MCRIP2Q9BUT9 160 aaKnown RBP8.1□□□□□ -1.11
RFC1-203ENST00000418436 OR51B2Q9Y5P1 312 aa8.1□□□□□ -1.11
RFC1-203ENST00000418436 IGLV11-55A0A075B6I3 123 aa8.09□□□□□ -1.11
RFC1-203ENST00000418436 A0A0B4J293 547 aa8.09□□□□□ -1.11
RFC1-203ENST00000418436 NAP1L6A6NFF2 107 aa8.09□□□□□ -1.11
RFC1-203ENST00000418436 ATG12O94817 140 aa8.09□□□□□ -1.11
RFC1-203ENST00000418436 DHFRP00374 187 aa8.09□□□□□ -1.11
RFC1-203ENST00000418436 IL7P13232 177 aa8.09□□□□□ -1.11
RFC1-203ENST00000418436 SUPT4H1P63272 117 aaKnown RBP8.09□□□□□ -1.11
RFC1-203ENST00000418436 DEFA5Q01523 94 aa8.09□□□□□ -1.11
RFC1-203ENST00000418436 DEFA6Q01524 100 aa8.09□□□□□ -1.11
RFC1-203ENST00000418436 WT1-ASQ06250 92 aa8.09□□□□□ -1.11
RFC1-203ENST00000418436 TRIM16LQ309B1 348 aa8.09□□□□□ -1.11
RFC1-203ENST00000418436 LCE3BQ5TA77 95 aa8.09□□□□□ -1.11
RFC1-203ENST00000418436 TRIQKQ629K1 86 aa8.09□□□□□ -1.11
RFC1-203ENST00000418436 ZNF57Q68EA5 555 aaPredicted RBP8.09□□□□□ -1.11
RFC1-203ENST00000418436 C19orf35Q6ZS72 473 aa8.09□□□□□ -1.11
RFC1-203ENST00000418436 ZNF429Q86V71 674 aa8.09□□□□□ -1.11
RFC1-203ENST00000418436 SGPP2Q8IWX5 399 aa8.09□□□□□ -1.11
RFC1-203ENST00000418436 OR4A16Q8NH70 328 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms