RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 CRYGCP07315 174 aa17.93■□□□□ 0.46
SMARCB1-205ENST00000417137 CD33P20138 364 aa17.93■□□□□ 0.46
SMARCB1-205ENST00000417137 SRPXP78539 464 aa17.93■□□□□ 0.46
SMARCB1-205ENST00000417137 MRPL41Q8IXM3 137 aaKnown RBP17.93■□□□□ 0.46
SMARCB1-205ENST00000417137 CENPSQ8N2Z9 138 aa17.93■□□□□ 0.46
SMARCB1-205ENST00000417137 IL22RA2Q969J5 263 aa17.93■□□□□ 0.46
SMARCB1-205ENST00000417137 RAX2Q96IS3 184 aa17.93■□□□□ 0.46
SMARCB1-205ENST00000417137 OR5B12Q96R08 314 aa17.93■□□□□ 0.46
SMARCB1-205ENST00000417137 HINT2Q9BX68 163 aa17.93■□□□□ 0.46
SMARCB1-205ENST00000417137 NDUFA4L2Q9NRX3 87 aa17.93■□□□□ 0.46
SMARCB1-205ENST00000417137 TMEM56-RWDD3S4R434 201 aa17.93■□□□□ 0.46
SMARCB1-205ENST00000417137 CGB1A6NKQ9 187 aa17.92■□□□□ 0.46
SMARCB1-205ENST00000417137 FAM223BA6NKX1 122 aa17.92■□□□□ 0.46
SMARCB1-205ENST00000417137 NDUFB6O95139 128 aa17.92■□□□□ 0.46
SMARCB1-205ENST00000417137 LGALS1P09382 135 aaKnown RBP17.92■□□□□ 0.46
SMARCB1-205ENST00000417137 DEFA4P12838 97 aa17.92■□□□□ 0.46
SMARCB1-205ENST00000417137 AREGP15514 252 aa17.92■□□□□ 0.46
SMARCB1-205ENST00000417137 TMEM187Q14656 261 aa17.92■□□□□ 0.46
SMARCB1-205ENST00000417137 TMEM268Q5VZI3 342 aa17.92■□□□□ 0.46
SMARCB1-205ENST00000417137 FAM223AQ8IWN6 122 aa17.92■□□□□ 0.46
SMARCB1-205ENST00000417137 SELENOHQ8IZQ5 122 aaKnown RBP17.92■□□□□ 0.46
SMARCB1-205ENST00000417137 WFDC9Q8NEX5 89 aa17.92■□□□□ 0.46
SMARCB1-205ENST00000417137 OR11H1Q8NG94 326 aa17.92■□□□□ 0.46
SMARCB1-205ENST00000417137 P2RX4Q99571 388 aa17.92■□□□□ 0.46
SMARCB1-205ENST00000417137 CYB5BO43169 146 aa17.91■□□□□ 0.46
SMARCB1-205ENST00000417137 LYRM1O43325 122 aa17.91■□□□□ 0.46
SMARCB1-205ENST00000417137 HIST1H1BP16401 226 aaKnown RBP17.91■□□□□ 0.46
SMARCB1-205ENST00000417137 CTRB1P17538 263 aa17.91■□□□□ 0.46
SMARCB1-205ENST00000417137 DEFB136Q30KP8 78 aa17.91■□□□□ 0.46
SMARCB1-205ENST00000417137 CTRB2Q6GPI1 263 aa17.91■□□□□ 0.46
SMARCB1-205ENST00000417137 ETV3LQ6ZN32 361 aa17.91■□□□□ 0.46
SMARCB1-205ENST00000417137 ZNF429Q86V71 674 aa17.91■□□□□ 0.46
SMARCB1-205ENST00000417137 NECAP1Q8NC96 275 aa17.91■□□□□ 0.46
SMARCB1-205ENST00000417137 OR1N2Q8NGR9 330 aa17.91■□□□□ 0.46
SMARCB1-205ENST00000417137 DPF1Q92782 380 aa17.91■□□□□ 0.46
SMARCB1-205ENST00000417137 LSM10Q969L4 123 aaKnown RBP17.91■□□□□ 0.46
SMARCB1-205ENST00000417137 MEGF8Q7Z7M0 2845 aa17.91■□□□□ 0.46
SMARCB1-205ENST00000417137 TRBV9A0A0B4J1U6 114 aa17.9■□□□□ 0.46
SMARCB1-205ENST00000417137 IGLC7A0M8Q6 106 aa17.9■□□□□ 0.46
SMARCB1-205ENST00000417137 PLA2G10O15496 165 aa17.9■□□□□ 0.46
SMARCB1-205ENST00000417137 IGHV3-11P01762 117 aa17.9■□□□□ 0.46
SMARCB1-205ENST00000417137 P0C879 139 aa17.9■□□□□ 0.46
SMARCB1-205ENST00000417137 UBE2MP61081 183 aaKnown RBP17.9■□□□□ 0.46
SMARCB1-205ENST00000417137 HSPE1P61604 102 aaKnown RBP17.9■□□□□ 0.46
SMARCB1-205ENST00000417137 SUPT4H1P63272 117 aaKnown RBP17.9■□□□□ 0.46
SMARCB1-205ENST00000417137 RHOGP84095 191 aa17.9■□□□□ 0.46
SMARCB1-205ENST00000417137 ATP5G2Q06055 141 aa17.9■□□□□ 0.46
SMARCB1-205ENST00000417137 LGI3Q8N145 548 aa17.9■□□□□ 0.46
SMARCB1-205ENST00000417137 DUX3Q96PT4 197 aa17.9■□□□□ 0.46
SMARCB1-205ENST00000417137 PDCD10Q9BUL8 212 aa17.9■□□□□ 0.46
SMARCB1-205ENST00000417137 TRRAPQ9Y4A5 3859 aa17.9■□□□□ 0.46
SMARCB1-205ENST00000417137 PRH1P02810 166 aa17.89■□□□□ 0.45
SMARCB1-205ENST00000417137 OR13C7P0DN81 318 aa17.89■□□□□ 0.45
SMARCB1-205ENST00000417137 VAMP1P23763 118 aa17.89■□□□□ 0.45
SMARCB1-205ENST00000417137 MECP2P51608 486 aaKnown RBP17.89■□□□□ 0.45
SMARCB1-205ENST00000417137 RAB25P57735 213 aa17.89■□□□□ 0.45
SMARCB1-205ENST00000417137 ZNF616Q08AN1 781 aa17.89■□□□□ 0.45
SMARCB1-205ENST00000417137 LINC00482Q8N8I6 264 aa17.89■□□□□ 0.45
SMARCB1-205ENST00000417137 OR10W1Q8NGF6 305 aa17.89■□□□□ 0.45
SMARCB1-205ENST00000417137 LHFPL5Q8TAF8 219 aa17.89■□□□□ 0.45
SMARCB1-205ENST00000417137 MGAM2Q2M2H8 2515 aa17.89■□□□□ 0.45
SMARCB1-205ENST00000417137 WNK1Q9H4A3 2382 aa17.88■□□□□ 0.45
SMARCB1-205ENST00000417137 A0A0B4J293 547 aa17.88■□□□□ 0.45
SMARCB1-205ENST00000417137 DBX1A6NMT0 343 aa17.88■□□□□ 0.45
SMARCB1-205ENST00000417137 HSPB1P04792 205 aaKnown RBP17.88■□□□□ 0.45
SMARCB1-205ENST00000417137 REG1AP05451 166 aa17.88■□□□□ 0.45
SMARCB1-205ENST00000417137 OR8U8P0C7N1 319 aa17.88■□□□□ 0.45
SMARCB1-205ENST00000417137 IZUMO4Q1ZYL8 232 aa17.88■□□□□ 0.45
SMARCB1-205ENST00000417137 CTNNBIP1Q9NSA3 81 aaPredicted RBP17.88■□□□□ 0.45
SMARCB1-205ENST00000417137 THYN1Q9P016 225 aa17.88■□□□□ 0.45
SMARCB1-205ENST00000417137 CACFD1Q9UGQ2 172 aa17.88■□□□□ 0.45
SMARCB1-205ENST00000417137 A0A0B4J2A0 478 aa17.87■□□□□ 0.45
SMARCB1-205ENST00000417137 LINC01619G3V211 115 aa17.87■□□□□ 0.45
SMARCB1-205ENST00000417137 IFNA17P01571 189 aa17.87■□□□□ 0.45
SMARCB1-205ENST00000417137 BTCP35070 178 aa17.87■□□□□ 0.45
SMARCB1-205ENST00000417137 PRCDQ00LT1 54 aa17.87■□□□□ 0.45
SMARCB1-205ENST00000417137 FHL3Q13643 280 aa17.87■□□□□ 0.45
SMARCB1-205ENST00000417137 KLK9Q2XQG4 91 aa17.87■□□□□ 0.45
SMARCB1-205ENST00000417137 FAM209BQ5JX69 171 aa17.87■□□□□ 0.45
SMARCB1-205ENST00000417137 MZT2BQ6NZ67 158 aa17.87■□□□□ 0.45
SMARCB1-205ENST00000417137 RCC1LQ96I51 464 aaKnown RBP17.87■□□□□ 0.45
SMARCB1-205ENST00000417137 RANGRFQ9HD47 186 aaPredicted RBP17.87■□□□□ 0.45
SMARCB1-205ENST00000417137 SHPKQ9UHJ6 478 aa17.87■□□□□ 0.45
SMARCB1-205ENST00000417137 FBXL7Q9UJT9 491 aa17.87■□□□□ 0.45
SMARCB1-205ENST00000417137 KLK9Q9UKQ9 250 aa17.87■□□□□ 0.45
SMARCB1-205ENST00000417137 OR2J3O76001 311 aa17.86■□□□□ 0.45
SMARCB1-205ENST00000417137 SFT2D2O95562 160 aa17.86■□□□□ 0.45
SMARCB1-205ENST00000417137 DUS4LO95620 317 aaKnown RBP17.86■□□□□ 0.45
SMARCB1-205ENST00000417137 WT1-ASQ06250 92 aa17.86■□□□□ 0.45
SMARCB1-205ENST00000417137 ZNF343Q6P1L6 599 aa17.86■□□□□ 0.45
SMARCB1-205ENST00000417137 SLC35G3Q8N808 338 aa17.86■□□□□ 0.45
SMARCB1-205ENST00000417137 OR1L6Q8NGR2 347 aa17.86■□□□□ 0.45
SMARCB1-205ENST00000417137 GPR146Q96CH1 333 aa17.86■□□□□ 0.45
SMARCB1-205ENST00000417137 FANCD2OSQ96PS1 177 aa17.86■□□□□ 0.45
SMARCB1-205ENST00000417137 MCRIP2Q9BUT9 160 aaKnown RBP17.86■□□□□ 0.45
SMARCB1-205ENST00000417137 ALX4Q9H161 411 aaPredicted RBP17.86■□□□□ 0.45
SMARCB1-205ENST00000417137 PLEKHA3Q9HB20 300 aa17.86■□□□□ 0.45
SMARCB1-205ENST00000417137 A0A0G2JRQ6 117 aa17.85■□□□□ 0.45
SMARCB1-205ENST00000417137 DUXBA0A1W2PPF3 345 aa17.85■□□□□ 0.45
SMARCB1-205ENST00000417137 ST8SIA3O43173 380 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms