RNA–Protein interactions for RNA: ENST00000402434.6

RTN4-207, Transcript of reticulon 4, humanhuman

TSL 5 BASIC

Gene RTN4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-207ENST00000402434 FKBP11Q9NYL4 201 aa14.8□□□□□ -0.04
RTN4-207ENST00000402434 PRNDQ9UKY0 176 aa14.8□□□□□ -0.04
RTN4-207ENST00000402434 NSG2Q9Y328 171 aa14.8□□□□□ -0.04
RTN4-207ENST00000402434 TRAPPC2P0DI81 140 aa14.79□□□□□ -0.04
RTN4-207ENST00000402434 TRAPPC2BP0DI82 140 aa14.79□□□□□ -0.04
RTN4-207ENST00000402434 FAUP35544 74 aaKnown RBP14.79□□□□□ -0.04
RTN4-207ENST00000402434 EGFEM1PQ0D2K5 195 aa14.79□□□□□ -0.04
RTN4-207ENST00000402434 SP6Q3SY56 376 aa14.79□□□□□ -0.04
RTN4-207ENST00000402434 H2BFWTQ7Z2G1 175 aa14.79□□□□□ -0.04
RTN4-207ENST00000402434 HSD17B13Q7Z5P4 300 aaPredicted RBP14.79□□□□□ -0.04
RTN4-207ENST00000402434 OR5B3Q8NH48 314 aa14.79□□□□□ -0.04
RTN4-207ENST00000402434 DCUN1D4Q92564 292 aa14.79□□□□□ -0.04
RTN4-207ENST00000402434 DLX4Q92988 240 aaPredicted RBP14.79□□□□□ -0.04
RTN4-207ENST00000402434 C15orf61A6NNL5 157 aa14.78□□□□□ -0.04
RTN4-207ENST00000402434 DHFRP00374 187 aa14.78□□□□□ -0.04
RTN4-207ENST00000402434 P0C879 139 aa14.78□□□□□ -0.04
RTN4-207ENST00000402434 SLURP1P55000 103 aa14.78□□□□□ -0.04
RTN4-207ENST00000402434 C19orf35Q6ZS72 473 aa14.78□□□□□ -0.04
RTN4-207ENST00000402434 OR10W1Q8NGF6 305 aa14.78□□□□□ -0.04
RTN4-207ENST00000402434 SCGB3A2Q96PL1 93 aa14.78□□□□□ -0.04
RTN4-207ENST00000402434 TMEM222Q9H0R3 208 aa14.78□□□□□ -0.04
RTN4-207ENST00000402434 OR51B2Q9Y5P1 312 aa14.78□□□□□ -0.04
RTN4-207ENST00000402434 CRYM-AS1A6NIL9 109 aa14.77□□□□□ -0.04
RTN4-207ENST00000402434 DBX1A6NMT0 343 aa14.77□□□□□ -0.04
RTN4-207ENST00000402434 IGKV1-5P01602 117 aa14.77□□□□□ -0.04
RTN4-207ENST00000402434 ATP5G2Q06055 141 aa14.77□□□□□ -0.04
RTN4-207ENST00000402434 WT1-ASQ06250 92 aa14.77□□□□□ -0.04
RTN4-207ENST00000402434 GLYATL2Q8WU03 294 aa14.77□□□□□ -0.04
RTN4-207ENST00000402434 NAA60Q9H7X0 242 aa14.77□□□□□ -0.04
RTN4-207ENST00000402434 PEF1Q9UBV8 284 aaKnown RBP14.77□□□□□ -0.04
RTN4-207ENST00000402434 TEX13DA0A0J9YY54 714 aaPredicted RBP14.76□□□□□ -0.05
RTN4-207ENST00000402434 ANKRD34BA5PLL1 514 aa14.76□□□□□ -0.05
RTN4-207ENST00000402434 OVOL1O14753 267 aa14.76□□□□□ -0.05
RTN4-207ENST00000402434 OR2J3O76001 311 aa14.76□□□□□ -0.05
RTN4-207ENST00000402434 ATG12O94817 140 aa14.76□□□□□ -0.05
RTN4-207ENST00000402434 CDS2O95674 445 aa14.76□□□□□ -0.05
RTN4-207ENST00000402434 REG1AP05451 166 aa14.76□□□□□ -0.05
RTN4-207ENST00000402434 OR5AC1P0C628 307 aa14.76□□□□□ -0.05
RTN4-207ENST00000402434 HIST1H1BP16401 226 aaKnown RBP14.76□□□□□ -0.05
RTN4-207ENST00000402434 ZP3P21754 424 aa14.76□□□□□ -0.05
RTN4-207ENST00000402434 HOXD3P31249 432 aaPredicted RBP14.76□□□□□ -0.05
RTN4-207ENST00000402434 C15orf32Q32M92 178 aa14.76□□□□□ -0.05
RTN4-207ENST00000402434 C9orf66Q5T8R8 295 aa14.76□□□□□ -0.05
RTN4-207ENST00000402434 REC114Q7Z4M0 266 aa14.76□□□□□ -0.05
RTN4-207ENST00000402434 SDHCQ99643 169 aaPredicted RBP14.76□□□□□ -0.05
RTN4-207ENST00000402434 IGLV11-55A0A075B6I3 123 aa14.76□□□□□ -0.05
RTN4-207ENST00000402434 A6NHS1 94 aa14.76□□□□□ -0.05
RTN4-207ENST00000402434 SEC14L6B5MCN3 397 aa14.76□□□□□ -0.05
RTN4-207ENST00000402434 DEFA4P12838 97 aa14.76□□□□□ -0.05
RTN4-207ENST00000402434 KRTAP10-11P60412 298 aa14.76□□□□□ -0.05
RTN4-207ENST00000402434 BAK1Q16611 211 aa14.76□□□□□ -0.05
RTN4-207ENST00000402434 TRIM16LQ309B1 348 aa14.76□□□□□ -0.05
RTN4-207ENST00000402434 PDLIM3Q53GG5 364 aaPredicted RBP14.76□□□□□ -0.05
RTN4-207ENST00000402434 OR4A16Q8NH70 328 aa14.76□□□□□ -0.05
RTN4-207ENST00000402434 LSM10Q969L4 123 aaKnown RBP14.76□□□□□ -0.05
RTN4-207ENST00000402434 FBXL7Q9UJT9 491 aa14.76□□□□□ -0.05
RTN4-207ENST00000402434 A0A0B4J293 547 aa14.75□□□□□ -0.05
RTN4-207ENST00000402434 NDUFB8O95169 186 aa14.75□□□□□ -0.05
RTN4-207ENST00000402434 TRBV12-3P01733 135 aa14.75□□□□□ -0.05
RTN4-207ENST00000402434 PRB2P02812 416 aaPredicted RBP14.75□□□□□ -0.05
RTN4-207ENST00000402434 OR13C7P0DN81 318 aa14.75□□□□□ -0.05
RTN4-207ENST00000402434 INSL3P51460 131 aa14.75□□□□□ -0.05
RTN4-207ENST00000402434 DHODHQ02127 395 aa14.75□□□□□ -0.05
RTN4-207ENST00000402434 EXOSC2Q13868 293 aaKnown RBP14.75□□□□□ -0.05
RTN4-207ENST00000402434 FAM209BQ5JX69 171 aa14.75□□□□□ -0.05
RTN4-207ENST00000402434 ZNF429Q86V71 674 aa14.75□□□□□ -0.05
RTN4-207ENST00000402434 TMEM230Q96A57 120 aa14.75□□□□□ -0.05
RTN4-207ENST00000402434 GALNT14Q96FL9 552 aa14.75□□□□□ -0.05
RTN4-207ENST00000402434 TMEM56Q96MV1 263 aa14.75□□□□□ -0.05
RTN4-207ENST00000402434 DMRT1Q9Y5R6 373 aa14.75□□□□□ -0.05
RTN4-207ENST00000402434 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.74□□□□□ -0.05
RTN4-207ENST00000402434 AKR1C2P52895 323 aa14.74□□□□□ -0.05
RTN4-207ENST00000402434 HSPE1P61604 102 aaKnown RBP14.74□□□□□ -0.05
RTN4-207ENST00000402434 KLF5Q13887 457 aaPredicted RBP14.74□□□□□ -0.05
RTN4-207ENST00000402434 IZUMO4Q1ZYL8 232 aa14.74□□□□□ -0.05
RTN4-207ENST00000402434 SGPP2Q8IWX5 399 aa14.74□□□□□ -0.05
RTN4-207ENST00000402434 HINT2Q9BX68 163 aa14.74□□□□□ -0.05
RTN4-207ENST00000402434 AURKAIP1Q9NWT8 199 aaPredicted RBP14.74□□□□□ -0.05
RTN4-207ENST00000402434 ZNF57Q68EA5 555 aaPredicted RBP14.73□□□□□ -0.05
RTN4-207ENST00000402434 LINC00299Q6ZSB3 139 aa14.73□□□□□ -0.05
RTN4-207ENST00000402434 FAM219AQ8IW50 185 aa14.73□□□□□ -0.05
RTN4-207ENST00000402434 LHFPL5Q8TAF8 219 aa14.73□□□□□ -0.05
RTN4-207ENST00000402434 RBPMSQ93062 196 aaKnown RBP14.73□□□□□ -0.05
RTN4-207ENST00000402434 SLC25A21Q9BQT8 299 aaPredicted RBP14.73□□□□□ -0.05
RTN4-207ENST00000402434 KCNIP3Q9Y2W7 256 aa14.73□□□□□ -0.05
RTN4-207ENST00000402434 TMEM56-RWDD3S4R434 201 aa14.73□□□□□ -0.05
RTN4-207ENST00000402434 DNAH3Q8TD57 4116 aa14.72□□□□□ -0.05
RTN4-207ENST00000402434 ACSM6Q6P461 480 aa14.72□□□□□ -0.05
RTN4-207ENST00000402434 RRNAD1Q96FB5 475 aaKnown RBP14.72□□□□□ -0.05
RTN4-207ENST00000402434 THYN1Q9P016 225 aa14.72□□□□□ -0.05
RTN4-207ENST00000402434 ZMAT5Q9UDW3 170 aaKnown RBP14.72□□□□□ -0.05
RTN4-207ENST00000402434 A0A0G2JRQ6 117 aa14.71□□□□□ -0.05
RTN4-207ENST00000402434 BMPR1BO00238 502 aa14.71□□□□□ -0.05
RTN4-207ENST00000402434 SUPT4H1P63272 117 aaKnown RBP14.71□□□□□ -0.05
RTN4-207ENST00000402434 PRCDQ00LT1 54 aa14.71□□□□□ -0.05
RTN4-207ENST00000402434 TMEM187Q14656 261 aa14.71□□□□□ -0.05
RTN4-207ENST00000402434 TRIQKQ629K1 86 aa14.71□□□□□ -0.05
RTN4-207ENST00000402434 SELENOHQ8IZQ5 122 aaKnown RBP14.71□□□□□ -0.05
RTN4-207ENST00000402434 CXorf58Q96LI9 332 aa14.71□□□□□ -0.05
RTN4-207ENST00000402434 F11RQ9Y624 299 aaKnown RBP14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms