RNA–Protein interactions for RNA: ENST00000399438.7

TRAPPC13-202, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TRAPPC13, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-202ENST00000399438 SLC17A3O00476 420 aa5.07□□□□□ -1.6
TRAPPC13-202ENST00000399438 IGKV1D-12P01611 117 aa5.07□□□□□ -1.6
TRAPPC13-202ENST00000399438 CD79AP11912 226 aa5.07□□□□□ -1.6
TRAPPC13-202ENST00000399438 MPGP29372 298 aa5.07□□□□□ -1.6
TRAPPC13-202ENST00000399438 SUPT4H1P63272 117 aaKnown RBP5.07□□□□□ -1.6
TRAPPC13-202ENST00000399438 SLC35A1P78382 337 aa5.07□□□□□ -1.6
TRAPPC13-202ENST00000399438 ARG2P78540 354 aa5.07□□□□□ -1.6
TRAPPC13-202ENST00000399438 ZNF92Q03936 586 aa5.07□□□□□ -1.6
TRAPPC13-202ENST00000399438 GAGE5Q13069 117 aa5.07□□□□□ -1.6
TRAPPC13-202ENST00000399438 GAGE6Q13070 117 aa5.07□□□□□ -1.6
TRAPPC13-202ENST00000399438 VAX1Q5SQQ9 334 aa5.07□□□□□ -1.6
TRAPPC13-202ENST00000399438 FAM120AOSQ5T036 256 aa5.07□□□□□ -1.6
TRAPPC13-202ENST00000399438 C11orf87Q6NUJ2 197 aa5.07□□□□□ -1.6
TRAPPC13-202ENST00000399438 LINC00482Q8N8I6 264 aa5.07□□□□□ -1.6
TRAPPC13-202ENST00000399438 CT55Q8WUE5 264 aa5.07□□□□□ -1.6
TRAPPC13-202ENST00000399438 ASB13Q8WXK3 278 aa5.07□□□□□ -1.6
TRAPPC13-202ENST00000399438 NABP1Q96AH0 204 aa5.07□□□□□ -1.6
TRAPPC13-202ENST00000399438 IMMP1LQ96LU5 166 aa5.07□□□□□ -1.6
TRAPPC13-202ENST00000399438 MLST8Q9BVC4 326 aa5.07□□□□□ -1.6
TRAPPC13-202ENST00000399438 DOCK11Q5JSL3 2073 aa5.07□□□□□ -1.6
TRAPPC13-202ENST00000399438 COL6A6A6NMZ7 2263 aa5.07□□□□□ -1.6
TRAPPC13-202ENST00000399438 ARHGAP21Q5T5U3 1957 aa5.07□□□□□ -1.6
TRAPPC13-202ENST00000399438 ARFGEF3Q5TH69 2177 aa5.07□□□□□ -1.6
TRAPPC13-202ENST00000399438 MED12LQ86YW9 2145 aa5.07□□□□□ -1.6
TRAPPC13-202ENST00000399438 NGFP01138 241 aa5.07□□□□□ -1.6
TRAPPC13-202ENST00000399438 MYOD1P15172 320 aa5.07□□□□□ -1.6
TRAPPC13-202ENST00000399438 GALR1P47211 349 aa5.07□□□□□ -1.6
TRAPPC13-202ENST00000399438 RPS20P60866 119 aaKnown RBP5.07□□□□□ -1.6
TRAPPC13-202ENST00000399438 GUCA2BQ16661 112 aa5.07□□□□□ -1.6
TRAPPC13-202ENST00000399438 WDR82Q6UXN9 313 aa5.07□□□□□ -1.6
TRAPPC13-202ENST00000399438 MRGPRGQ86SM5 289 aa5.07□□□□□ -1.6
TRAPPC13-202ENST00000399438 SULT4A1Q9BR01 284 aa5.07□□□□□ -1.6
TRAPPC13-202ENST00000399438 DEFB127Q9H1M4 99 aa5.07□□□□□ -1.6
TRAPPC13-202ENST00000399438 MSL2Q9HCI7 577 aa5.07□□□□□ -1.6
TRAPPC13-202ENST00000399438 TMEM9BQ9NQ34 198 aa5.07□□□□□ -1.6
TRAPPC13-202ENST00000399438 SPTBN4Q9H254 2564 aa5.07□□□□□ -1.6
TRAPPC13-202ENST00000399438 HEATR1Q9H583 2144 aaKnown RBP5.07□□□□□ -1.6
TRAPPC13-202ENST00000399438 ZNF292O60281 2723 aa5.07□□□□□ -1.6
TRAPPC13-202ENST00000399438 CACNA1BQ00975 2339 aa5.06□□□□□ -1.6
TRAPPC13-202ENST00000399438 ZNF705EA8MWA4 302 aaPredicted RBP5.06□□□□□ -1.6
TRAPPC13-202ENST00000399438 ATG12O94817 140 aa5.06□□□□□ -1.6
TRAPPC13-202ENST00000399438 TFPI2P48307 235 aa5.06□□□□□ -1.6
TRAPPC13-202ENST00000399438 SRSF7Q16629 238 aaKnown RBP eCLIP5.06□□□□□ -1.6
TRAPPC13-202ENST00000399438 HIST2H3PS2Q5TEC6 136 aa5.06□□□□□ -1.6
TRAPPC13-202ENST00000399438 FAM53AQ6NSI3 398 aaPredicted RBP5.06□□□□□ -1.6
TRAPPC13-202ENST00000399438 DNM1P46Q6ZS02 220 aa5.06□□□□□ -1.6
TRAPPC13-202ENST00000399438 FAM231DQ6ZW35 169 aa5.06□□□□□ -1.6
TRAPPC13-202ENST00000399438 SLC25A26Q70HW3 274 aa5.06□□□□□ -1.6
TRAPPC13-202ENST00000399438 SLC25A42Q86VD7 318 aa5.06□□□□□ -1.6
TRAPPC13-202ENST00000399438 OSR2Q8N2R0 312 aa5.06□□□□□ -1.6
TRAPPC13-202ENST00000399438 TERB2Q8NHR7 220 aa5.06□□□□□ -1.6
TRAPPC13-202ENST00000399438 PSMF1Q92530 271 aa5.06□□□□□ -1.6
TRAPPC13-202ENST00000399438 MRPS24Q96EL2 167 aaKnown RBP5.06□□□□□ -1.6
TRAPPC13-202ENST00000399438 BTF3L4Q96K17 158 aa5.06□□□□□ -1.6
TRAPPC13-202ENST00000399438 AK3Q9UIJ7 227 aa5.06□□□□□ -1.6
TRAPPC13-202ENST00000399438 WSB1Q9Y6I7 421 aa5.06□□□□□ -1.6
TRAPPC13-202ENST00000399438 USF3Q68DE3 2245 aa5.06□□□□□ -1.6
TRAPPC13-202ENST00000399438 COL27A1Q8IZC6 1860 aaPredicted RBP5.06□□□□□ -1.6
TRAPPC13-202ENST00000399438 CCL21O00585 134 aa5.06□□□□□ -1.6
TRAPPC13-202ENST00000399438 TCF21O43680 179 aa5.06□□□□□ -1.6
TRAPPC13-202ENST00000399438 NDUFS7O75251 213 aa5.06□□□□□ -1.6
TRAPPC13-202ENST00000399438 ZNF169Q14929 603 aaPredicted RBP5.06□□□□□ -1.6
TRAPPC13-202ENST00000399438 AADACL3Q5VUY0 350 aa5.06□□□□□ -1.6
TRAPPC13-202ENST00000399438 RPL7L1Q6DKI1 246 aaKnown RBP5.06□□□□□ -1.6
TRAPPC13-202ENST00000399438 OPN5Q6U736 354 aa5.06□□□□□ -1.6
TRAPPC13-202ENST00000399438 ADAMTSL5Q6ZMM2 481 aa5.06□□□□□ -1.6
TRAPPC13-202ENST00000399438 MUC15Q8N387 334 aa5.06□□□□□ -1.6
TRAPPC13-202ENST00000399438 SLC25A21Q9BQT8 299 aaPredicted RBP5.06□□□□□ -1.6
TRAPPC13-202ENST00000399438 RTBDNQ9BSG5 229 aaPredicted RBP5.06□□□□□ -1.6
TRAPPC13-202ENST00000399438 C19orf73Q9NVV2 129 aa5.06□□□□□ -1.6
TRAPPC13-202ENST00000399438 TRGV11A0A075B6L2 103 aa5.06□□□□□ -1.6
TRAPPC13-202ENST00000399438 C5orf49A4QMS7 147 aa5.06□□□□□ -1.6
TRAPPC13-202ENST00000399438 PRRG2O14669 202 aa5.06□□□□□ -1.6
TRAPPC13-202ENST00000399438 OR13C7P0DN81 318 aa5.06□□□□□ -1.6
TRAPPC13-202ENST00000399438 COX5AP20674 150 aa5.06□□□□□ -1.6
TRAPPC13-202ENST00000399438 NFYBP25208 207 aa5.06□□□□□ -1.6
TRAPPC13-202ENST00000399438 FOXF2Q12947 444 aa5.06□□□□□ -1.6
TRAPPC13-202ENST00000399438 IAH1Q2TAA2 248 aaPredicted RBP5.06□□□□□ -1.6
TRAPPC13-202ENST00000399438 PABPC1L2AQ5JQF8 200 aa5.06□□□□□ -1.6
TRAPPC13-202ENST00000399438 OR13C6PQ8NH95 151 aa5.06□□□□□ -1.6
TRAPPC13-202ENST00000399438 DNAJC30Q96LL9 226 aa5.06□□□□□ -1.6
TRAPPC13-202ENST00000399438 CMSS1Q9BQ75 279 aaKnown RBP5.06□□□□□ -1.6
TRAPPC13-202ENST00000399438 RNF126Q9BV68 326 aa5.06□□□□□ -1.6
TRAPPC13-202ENST00000399438 VSIRQ9H7M9 311 aa5.06□□□□□ -1.6
TRAPPC13-202ENST00000399438 ZNF442Q9H7R0 627 aa5.06□□□□□ -1.6
TRAPPC13-202ENST00000399438 SPANXA1Q9NS26 97 aa5.06□□□□□ -1.6
TRAPPC13-202ENST00000399438 TNFSF18Q9UNG2 199 aa5.06□□□□□ -1.6
TRAPPC13-202ENST00000399438 FLVCR1Q9Y5Y0 555 aa5.06□□□□□ -1.6
TRAPPC13-202ENST00000399438 SPTBN1Q01082 2364 aaKnown RBP5.06□□□□□ -1.6
TRAPPC13-202ENST00000399438 DHRS3O75911 302 aa5.05□□□□□ -1.6
TRAPPC13-202ENST00000399438 GPM6AP51674 278 aa5.05□□□□□ -1.6
TRAPPC13-202ENST00000399438 Q6ZPA2 131 aa5.05□□□□□ -1.6
TRAPPC13-202ENST00000399438 LYZL2Q7Z4W2 148 aa5.05□□□□□ -1.6
TRAPPC13-202ENST00000399438 PIP4P1Q86T03 277 aa5.05□□□□□ -1.6
TRAPPC13-202ENST00000399438 C15orf40Q8WUR7 153 aa5.05□□□□□ -1.6
TRAPPC13-202ENST00000399438 GALMQ96C23 342 aa5.05□□□□□ -1.6
TRAPPC13-202ENST00000399438 ADAMTS20P59510 1910 aa5.05□□□□□ -1.6
TRAPPC13-202ENST00000399438 OR5H1A6NKK0 313 aa5.05□□□□□ -1.6
TRAPPC13-202ENST00000399438 H3BP45 60 aa5.05□□□□□ -1.6
TRAPPC13-202ENST00000399438 OR8U8P0C7N1 319 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms