RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 A0A0G2JLM5 398 aa16.41■□□□□ 0.22
TSPAN4-206ENST00000397408 C13orf42A0A1B0GVH6 325 aa16.41■□□□□ 0.22
TSPAN4-206ENST00000397408 IGLC7A0M8Q6 106 aa16.41■□□□□ 0.22
TSPAN4-206ENST00000397408 DBX1A6NMT0 343 aa16.41■□□□□ 0.22
TSPAN4-206ENST00000397408 CDS2O95674 445 aa16.41■□□□□ 0.22
TSPAN4-206ENST00000397408 TRAPPC2P0DI81 140 aa16.41■□□□□ 0.22
TSPAN4-206ENST00000397408 TRAPPC2BP0DI82 140 aa16.41■□□□□ 0.22
TSPAN4-206ENST00000397408 PSMB6P28072 239 aa16.41■□□□□ 0.22
TSPAN4-206ENST00000397408 RBMS2Q15434 407 aaKnown RBP16.41■□□□□ 0.22
TSPAN4-206ENST00000397408 THOC7Q6I9Y2 204 aaKnown RBP16.41■□□□□ 0.22
TSPAN4-206ENST00000397408 OR5B3Q8NH48 314 aa16.41■□□□□ 0.22
TSPAN4-206ENST00000397408 GALNT14Q96FL9 552 aa16.41■□□□□ 0.22
TSPAN4-206ENST00000397408 SRSF8Q9BRL6 282 aaKnown RBP16.41■□□□□ 0.22
TSPAN4-206ENST00000397408 FKBP11Q9NYL4 201 aa16.41■□□□□ 0.22
TSPAN4-206ENST00000397408 CENPXA8MT69 81 aa16.4■□□□□ 0.22
TSPAN4-206ENST00000397408 RBMXL2O75526 392 aaKnown RBP16.4■□□□□ 0.22
TSPAN4-206ENST00000397408 CRYGCP07315 174 aa16.4■□□□□ 0.22
TSPAN4-206ENST00000397408 P0C879 139 aa16.4■□□□□ 0.22
TSPAN4-206ENST00000397408 CTRB1P17538 263 aa16.4■□□□□ 0.22
TSPAN4-206ENST00000397408 RHOGP84095 191 aa16.4■□□□□ 0.22
TSPAN4-206ENST00000397408 FHL3Q13643 280 aa16.4■□□□□ 0.22
TSPAN4-206ENST00000397408 CTRB2Q6GPI1 263 aa16.4■□□□□ 0.22
TSPAN4-206ENST00000397408 WFDC9Q8NEX5 89 aa16.4■□□□□ 0.22
TSPAN4-206ENST00000397408 OR10W1Q8NGF6 305 aa16.4■□□□□ 0.22
TSPAN4-206ENST00000397408 OR1N2Q8NGR9 330 aa16.4■□□□□ 0.22
TSPAN4-206ENST00000397408 RBPMSQ93062 196 aaKnown RBP16.4■□□□□ 0.22
TSPAN4-206ENST00000397408 RRNAD1Q96FB5 475 aaKnown RBP16.4■□□□□ 0.22
TSPAN4-206ENST00000397408 C7orf50Q9BRJ6 194 aaKnown RBP16.4■□□□□ 0.22
TSPAN4-206ENST00000397408 CCDC32Q9BV29 185 aa16.4■□□□□ 0.22
TSPAN4-206ENST00000397408 NDUFA4L2Q9NRX3 87 aa16.4■□□□□ 0.22
TSPAN4-206ENST00000397408 PRR13Q9NZ81 148 aa16.4■□□□□ 0.22
TSPAN4-206ENST00000397408 KCNIP3Q9Y2W7 256 aa16.4■□□□□ 0.22
TSPAN4-206ENST00000397408 SUPT4H1P63272 117 aaKnown RBP16.39■□□□□ 0.21
TSPAN4-206ENST00000397408 ZNF616Q08AN1 781 aa16.39■□□□□ 0.21
TSPAN4-206ENST00000397408 TMEM268Q5VZI3 342 aa16.39■□□□□ 0.21
TSPAN4-206ENST00000397408 LSM10Q969L4 123 aaKnown RBP16.39■□□□□ 0.21
TSPAN4-206ENST00000397408 USMG5Q96IX5 58 aa16.39■□□□□ 0.21
TSPAN4-206ENST00000397408 TRBV9A0A0B4J1U6 114 aa16.38■□□□□ 0.21
TSPAN4-206ENST00000397408 A0A0G2JRQ6 117 aa16.38■□□□□ 0.21
TSPAN4-206ENST00000397408 FAM223BA6NKX1 122 aa16.38■□□□□ 0.21
TSPAN4-206ENST00000397408 OR2J3O76001 311 aa16.38■□□□□ 0.21
TSPAN4-206ENST00000397408 DHFRP00374 187 aa16.38■□□□□ 0.21
TSPAN4-206ENST00000397408 BTCP35070 178 aa16.38■□□□□ 0.21
TSPAN4-206ENST00000397408 TMEM187Q14656 261 aa16.38■□□□□ 0.21
TSPAN4-206ENST00000397408 C1QL4Q86Z23 238 aa16.38■□□□□ 0.21
TSPAN4-206ENST00000397408 FAM223AQ8IWN6 122 aa16.38■□□□□ 0.21
TSPAN4-206ENST00000397408 SELENOHQ8IZQ5 122 aaKnown RBP16.38■□□□□ 0.21
TSPAN4-206ENST00000397408 DPF1Q92782 380 aa16.38■□□□□ 0.21
TSPAN4-206ENST00000397408 IGHV4OR15-8A0A075B7B6 117 aa16.37■□□□□ 0.21
TSPAN4-206ENST00000397408 A0A087WW49 117 aa16.37■□□□□ 0.21
TSPAN4-206ENST00000397408 G3V4G9 280 aa16.37■□□□□ 0.21
TSPAN4-206ENST00000397408 NDUFB6O95139 128 aa16.37■□□□□ 0.21
TSPAN4-206ENST00000397408 OR8U8P0C7N1 319 aa16.37■□□□□ 0.21
TSPAN4-206ENST00000397408 OR13C7P0DN81 318 aa16.37■□□□□ 0.21
TSPAN4-206ENST00000397408 DEFA4P12838 97 aa16.37■□□□□ 0.21
TSPAN4-206ENST00000397408 IGLL1P15814 213 aa16.37■□□□□ 0.21
TSPAN4-206ENST00000397408 MECP2P51608 486 aaKnown RBP16.37■□□□□ 0.21
TSPAN4-206ENST00000397408 WT1-ASQ06250 92 aa16.37■□□□□ 0.21
TSPAN4-206ENST00000397408 HSD17B13Q7Z5P4 300 aaPredicted RBP16.37■□□□□ 0.21
TSPAN4-206ENST00000397408 CENPSQ8N2Z9 138 aa16.37■□□□□ 0.21
TSPAN4-206ENST00000397408 NECAP1Q8NC96 275 aa16.37■□□□□ 0.21
TSPAN4-206ENST00000397408 TMEM56Q96MV1 263 aa16.37■□□□□ 0.21
TSPAN4-206ENST00000397408 WDR12Q9GZL7 423 aaKnown RBP16.37■□□□□ 0.21
TSPAN4-206ENST00000397408 TMEM56-RWDD3S4R434 201 aa16.37■□□□□ 0.21
TSPAN4-206ENST00000397408 A0A0B4J293 547 aa16.36■□□□□ 0.21
TSPAN4-206ENST00000397408 ANXA3P12429 323 aa16.36■□□□□ 0.21
TSPAN4-206ENST00000397408 TMEM128Q5BJH2 165 aa16.36■□□□□ 0.21
TSPAN4-206ENST00000397408 OXLD1Q5BKU9 147 aa16.36■□□□□ 0.21
TSPAN4-206ENST00000397408 FAM219AQ8IW50 185 aa16.36■□□□□ 0.21
TSPAN4-206ENST00000397408 IL22RA2Q969J5 263 aa16.36■□□□□ 0.21
TSPAN4-206ENST00000397408 RCC1LQ96I51 464 aaKnown RBP16.36■□□□□ 0.21
TSPAN4-206ENST00000397408 FANCD2OSQ96PS1 177 aa16.36■□□□□ 0.21
TSPAN4-206ENST00000397408 ANKRD34BA5PLL1 514 aa16.36■□□□□ 0.21
TSPAN4-206ENST00000397408 LINC01619G3V211 115 aa16.36■□□□□ 0.21
TSPAN4-206ENST00000397408 PLA2G10O15496 165 aa16.36■□□□□ 0.21
TSPAN4-206ENST00000397408 VAMP1P23763 118 aa16.36■□□□□ 0.21
TSPAN4-206ENST00000397408 ATP5G2Q06055 141 aa16.36■□□□□ 0.21
TSPAN4-206ENST00000397408 EXOSC2Q13868 293 aaKnown RBP16.36■□□□□ 0.21
TSPAN4-206ENST00000397408 C15orf32Q32M92 178 aa16.36■□□□□ 0.21
TSPAN4-206ENST00000397408 SAMD5Q5TGI4 173 aa16.36■□□□□ 0.21
TSPAN4-206ENST00000397408 ZNF429Q86V71 674 aa16.36■□□□□ 0.21
TSPAN4-206ENST00000397408 SLC35G3Q8N808 338 aa16.36■□□□□ 0.21
TSPAN4-206ENST00000397408 FBXL7Q9UJT9 491 aa16.36■□□□□ 0.21
TSPAN4-206ENST00000397408 LYRM1O43325 122 aa16.35■□□□□ 0.21
TSPAN4-206ENST00000397408 HSPB1P04792 205 aaKnown RBP16.35■□□□□ 0.21
TSPAN4-206ENST00000397408 HIST1H1BP16401 226 aaKnown RBP16.35■□□□□ 0.21
TSPAN4-206ENST00000397408 SLURP1P55000 103 aa16.35■□□□□ 0.21
TSPAN4-206ENST00000397408 HSPE1P61604 102 aaKnown RBP16.35■□□□□ 0.21
TSPAN4-206ENST00000397408 SRPXP78539 464 aa16.35■□□□□ 0.21
TSPAN4-206ENST00000397408 PRCDQ00LT1 54 aa16.35■□□□□ 0.21
TSPAN4-206ENST00000397408 ZNF846Q147U1 533 aa16.35■□□□□ 0.21
TSPAN4-206ENST00000397408 ZNF343Q6P1L6 599 aa16.35■□□□□ 0.21
TSPAN4-206ENST00000397408 IGLV11-55A0A075B6I3 123 aa16.34■□□□□ 0.21
TSPAN4-206ENST00000397408 ST8SIA3O43173 380 aa16.34■□□□□ 0.21
TSPAN4-206ENST00000397408 PPP1R1AQ13522 171 aa16.34■□□□□ 0.21
TSPAN4-206ENST00000397408 KLK9Q2XQG4 91 aa16.34■□□□□ 0.21
TSPAN4-206ENST00000397408 SPINK9Q5DT21 86 aa16.34■□□□□ 0.21
TSPAN4-206ENST00000397408 Q6ZRM9 215 aa16.34■□□□□ 0.21
TSPAN4-206ENST00000397408 LGI3Q8N145 548 aa16.34■□□□□ 0.21
TSPAN4-206ENST00000397408 GPR146Q96CH1 333 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms