RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 NEIL1Q96FI4 390 aaPredicted RBP12.49□□□□□ -0.41
CPSF7-202ENST00000394888 ZNF257Q9Y2Q1 563 aa12.49□□□□□ -0.41
CPSF7-202ENST00000394888 RIF1Q5UIP0 2472 aaKnown RBP12.49□□□□□ -0.41
CPSF7-202ENST00000394888 CELSR1Q9NYQ6 3014 aa12.49□□□□□ -0.41
CPSF7-202ENST00000394888 IFNA10P01566 189 aa12.49□□□□□ -0.41
CPSF7-202ENST00000394888 C1QTNF9P0C862 333 aa12.49□□□□□ -0.41
CPSF7-202ENST00000394888 OR10W1Q8NGF6 305 aa12.49□□□□□ -0.41
CPSF7-202ENST00000394888 SSMEM1Q8WWF3 244 aa12.49□□□□□ -0.41
CPSF7-202ENST00000394888 MRPL20Q9BYC9 149 aaKnown RBP12.49□□□□□ -0.41
CPSF7-202ENST00000394888 SRD5A3Q9H8P0 318 aa12.49□□□□□ -0.41
CPSF7-202ENST00000394888 C17orf112F2Z3M2 114 aa12.48□□□□□ -0.41
CPSF7-202ENST00000394888 H0YJW9 148 aa12.48□□□□□ -0.41
CPSF7-202ENST00000394888 TYMSP04818 313 aa12.48□□□□□ -0.41
CPSF7-202ENST00000394888 SAA1P0DJI8 122 aaPredicted RBP12.48□□□□□ -0.41
CPSF7-202ENST00000394888 RPL15P61313 204 aaKnown RBP12.48□□□□□ -0.41
CPSF7-202ENST00000394888 SSBP2P81877 361 aaPredicted RBP12.48□□□□□ -0.41
CPSF7-202ENST00000394888 STPG3Q8N7X2 389 aa12.48□□□□□ -0.41
CPSF7-202ENST00000394888 OR5AN1Q8NGI8 311 aa12.48□□□□□ -0.41
CPSF7-202ENST00000394888 TMEM204Q9BSN7 226 aa12.48□□□□□ -0.41
CPSF7-202ENST00000394888 OR51M1Q9H341 326 aa12.48□□□□□ -0.41
CPSF7-202ENST00000394888 PRDM13Q9H4Q3 707 aa12.48□□□□□ -0.41
CPSF7-202ENST00000394888 HEYLQ9NQ87 328 aaPredicted RBP12.48□□□□□ -0.41
CPSF7-202ENST00000394888 KCNIP2Q9NS61 270 aa12.48□□□□□ -0.41
CPSF7-202ENST00000394888 ELOVL5Q9NYP7 299 aa12.48□□□□□ -0.41
CPSF7-202ENST00000394888 SLC45A2Q9UMX9 530 aa12.48□□□□□ -0.41
CPSF7-202ENST00000394888 SIAH2O43255 324 aa12.48□□□□□ -0.41
CPSF7-202ENST00000394888 RBMXL2O75526 392 aaKnown RBP12.48□□□□□ -0.41
CPSF7-202ENST00000394888 VENTXO95231 258 aa12.48□□□□□ -0.41
CPSF7-202ENST00000394888 CISD2Q8N5K1 135 aaKnown RBP12.48□□□□□ -0.41
CPSF7-202ENST00000394888 WFIKKN1Q96NZ8 548 aa12.48□□□□□ -0.41
CPSF7-202ENST00000394888 OR51B2Q9Y5P1 312 aa12.48□□□□□ -0.41
CPSF7-202ENST00000394888 SCO2A0A1W2PP80 73 aa12.48□□□□□ -0.41
CPSF7-202ENST00000394888 RNASE2P10153 161 aaKnown RBP12.48□□□□□ -0.41
CPSF7-202ENST00000394888 UBE2G2P60604 165 aa12.48□□□□□ -0.41
CPSF7-202ENST00000394888 NECAP1Q8NC96 275 aa12.48□□□□□ -0.41
CPSF7-202ENST00000394888 OR10A7Q8NGE5 316 aa12.48□□□□□ -0.41
CPSF7-202ENST00000394888 FNDC10F2Z333 226 aa12.47□□□□□ -0.41
CPSF7-202ENST00000394888 LY86O95711 162 aa12.47□□□□□ -0.41
CPSF7-202ENST00000394888 RPL29P47914 159 aaKnown RBP12.47□□□□□ -0.41
CPSF7-202ENST00000394888 PDLIM4P50479 330 aa12.47□□□□□ -0.41
CPSF7-202ENST00000394888 COA6Q5JTJ3 125 aaKnown RBP12.47□□□□□ -0.41
CPSF7-202ENST00000394888 ACTL10Q5JWF8 245 aa12.47□□□□□ -0.41
CPSF7-202ENST00000394888 MORN5Q5VZ52 161 aa12.47□□□□□ -0.41
CPSF7-202ENST00000394888 AURKAIP1Q9NWT8 199 aaPredicted RBP12.47□□□□□ -0.41
CPSF7-202ENST00000394888 APC2O95996 2303 aa12.47□□□□□ -0.41
CPSF7-202ENST00000394888 C16orf97H3BN30 126 aa12.47□□□□□ -0.41
CPSF7-202ENST00000394888 NDUFB4O95168 129 aa12.47□□□□□ -0.41
CPSF7-202ENST00000394888 FABP1P07148 127 aa12.47□□□□□ -0.41
CPSF7-202ENST00000394888 NPY1RP25929 384 aa12.47□□□□□ -0.41
CPSF7-202ENST00000394888 LOXP28300 417 aaPredicted RBP12.47□□□□□ -0.41
CPSF7-202ENST00000394888 NIT2Q9NQR4 276 aa12.47□□□□□ -0.41
CPSF7-202ENST00000394888 NDUFA4L2Q9NRX3 87 aa12.47□□□□□ -0.41
CPSF7-202ENST00000394888 MIOXQ9UGB7 285 aa12.47□□□□□ -0.41
CPSF7-202ENST00000394888 E7EQL1 145 aa12.47□□□□□ -0.41
CPSF7-202ENST00000394888 RND1Q92730 232 aa12.47□□□□□ -0.41
CPSF7-202ENST00000394888 PCGF1Q9BSM1 259 aa12.47□□□□□ -0.41
CPSF7-202ENST00000394888 NPVFQ9HCQ7 196 aa12.47□□□□□ -0.41
CPSF7-202ENST00000394888 BET1LQ9NYM9 111 aa12.47□□□□□ -0.41
CPSF7-202ENST00000394888 A0A087X0M5 115 aa12.46□□□□□ -0.41
CPSF7-202ENST00000394888 A0A1B0GX30 115 aa12.46□□□□□ -0.41
CPSF7-202ENST00000394888 ZNF137PP52743 207 aa12.46□□□□□ -0.41
CPSF7-202ENST00000394888 TBR1Q16650 682 aa12.46□□□□□ -0.41
CPSF7-202ENST00000394888 C4orf17Q53FE4 359 aa12.46□□□□□ -0.41
CPSF7-202ENST00000394888 HRASP01112 189 aa12.46□□□□□ -0.42
CPSF7-202ENST00000394888 GAMTQ14353 236 aa12.46□□□□□ -0.42
CPSF7-202ENST00000394888 C11orf52Q96A22 123 aa12.46□□□□□ -0.42
CPSF7-202ENST00000394888 PCNX1Q96RV3 2341 aa12.46□□□□□ -0.42
CPSF7-202ENST00000394888 PLXNB1O43157 2135 aa12.46□□□□□ -0.42
CPSF7-202ENST00000394888 ERVK-16P61578 105 aa12.46□□□□□ -0.42
CPSF7-202ENST00000394888 TMEM108Q6UXF1 575 aa12.46□□□□□ -0.42
CPSF7-202ENST00000394888 HIST1H2BLQ99880 126 aa12.46□□□□□ -0.42
CPSF7-202ENST00000394888 MRPL36Q9P0J6 103 aaKnown RBP12.46□□□□□ -0.42
CPSF7-202ENST00000394888 SLC25A10Q9UBX3 287 aaPredicted RBP12.46□□□□□ -0.42
CPSF7-202ENST00000394888 INS-IGF2F8WCM5 200 aa12.45□□□□□ -0.42
CPSF7-202ENST00000394888 PAX1P15863 534 aa12.45□□□□□ -0.42
CPSF7-202ENST00000394888 GALR1P47211 349 aa12.45□□□□□ -0.42
CPSF7-202ENST00000394888 PVRIGQ6DKI7 326 aa12.45□□□□□ -0.42
CPSF7-202ENST00000394888 WFDC8Q8IUA0 241 aa12.45□□□□□ -0.42
CPSF7-202ENST00000394888 SPACA3Q8IXA5 215 aa12.45□□□□□ -0.42
CPSF7-202ENST00000394888 CDSNQ15517 529 aa12.45□□□□□ -0.42
CPSF7-202ENST00000394888 TMEM177Q53S58 311 aa12.45□□□□□ -0.42
CPSF7-202ENST00000394888 C2orf83Q53S99 150 aa12.45□□□□□ -0.42
CPSF7-202ENST00000394888 MIR17HGQ75NE6 70 aa12.45□□□□□ -0.42
CPSF7-202ENST00000394888 TPSG1Q9NRR2 321 aa12.45□□□□□ -0.42
CPSF7-202ENST00000394888 IGKV1D-37A0A075B6S9 117 aa12.44□□□□□ -0.42
CPSF7-202ENST00000394888 PDE6DO43924 150 aa12.44□□□□□ -0.42
CPSF7-202ENST00000394888 GCHFRP30047 84 aa12.44□□□□□ -0.42
CPSF7-202ENST00000394888 MEF2CQ06413 473 aaPredicted RBP12.44□□□□□ -0.42
CPSF7-202ENST00000394888 HLA-DRB5Q30154 266 aa12.44□□□□□ -0.42
CPSF7-202ENST00000394888 TMEM30BQ3MIR4 351 aa12.44□□□□□ -0.42
CPSF7-202ENST00000394888 TEPPQ6URK8 271 aa12.44□□□□□ -0.42
CPSF7-202ENST00000394888 ZNF709Q8N972 641 aa12.44□□□□□ -0.42
CPSF7-202ENST00000394888 C8orf31Q8N9H6 132 aa12.44□□□□□ -0.42
CPSF7-202ENST00000394888 ADTRPQ96IZ2 230 aa12.44□□□□□ -0.42
CPSF7-202ENST00000394888 GATA2P23769 480 aaPredicted RBP12.44□□□□□ -0.42
CPSF7-202ENST00000394888 DLX1P56177 255 aa12.44□□□□□ -0.42
CPSF7-202ENST00000394888 WT1-ASQ06250 92 aa12.44□□□□□ -0.42
CPSF7-202ENST00000394888 TMEM37Q8WXS4 190 aa12.44□□□□□ -0.42
CPSF7-202ENST00000394888 NABP2Q9BQ15 211 aa12.44□□□□□ -0.42
CPSF7-202ENST00000394888 TCEAL7Q9BRU2 100 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 158.6 ms