RNA–Protein interactions for RNA: ENST00000390627.3

IGHV3-53-201, Transcript of immunoglobulin heavy variable 3-53, humanhuman

APPRIS P1 BASIC

Gene IGHV3-53, Length 571 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-53-201ENST00000390627 CRYGCP07315 174 aa11.66□□□□□ -0.54
IGHV3-53-201ENST00000390627 AREGP15514 252 aa11.66□□□□□ -0.54
IGHV3-53-201ENST00000390627 CTRB1P17538 263 aa11.66□□□□□ -0.54
IGHV3-53-201ENST00000390627 ZNF616Q08AN1 781 aa11.66□□□□□ -0.54
IGHV3-53-201ENST00000390627 FHL3Q13643 280 aa11.66□□□□□ -0.54
IGHV3-53-201ENST00000390627 CTRB2Q6GPI1 263 aa11.66□□□□□ -0.54
IGHV3-53-201ENST00000390627 TMED4Q7Z7H5 227 aa11.66□□□□□ -0.54
IGHV3-53-201ENST00000390627 FAM223AQ8IWN6 122 aa11.66□□□□□ -0.54
IGHV3-53-201ENST00000390627 MRPL41Q8IXM3 137 aaKnown RBP11.66□□□□□ -0.54
IGHV3-53-201ENST00000390627 WFDC9Q8NEX5 89 aa11.66□□□□□ -0.54
IGHV3-53-201ENST00000390627 OR11H1Q8NG94 326 aa11.66□□□□□ -0.54
IGHV3-53-201ENST00000390627 GLYATL2Q8WU03 294 aa11.66□□□□□ -0.54
IGHV3-53-201ENST00000390627 DPF1Q92782 380 aa11.66□□□□□ -0.54
IGHV3-53-201ENST00000390627 RBPMSQ93062 196 aaKnown RBP11.66□□□□□ -0.54
IGHV3-53-201ENST00000390627 LSM10Q969L4 123 aaKnown RBP11.66□□□□□ -0.54
IGHV3-53-201ENST00000390627 DUX3Q96PT4 197 aa11.66□□□□□ -0.54
IGHV3-53-201ENST00000390627 WDR12Q9GZL7 423 aaKnown RBP11.66□□□□□ -0.54
IGHV3-53-201ENST00000390627 MGAM2Q2M2H8 2515 aa11.66□□□□□ -0.54
IGHV3-53-201ENST00000390627 PIGBOS1A0A0B4J2F0 54 aa11.65□□□□□ -0.54
IGHV3-53-201ENST00000390627 IGLC7A0M8Q6 106 aa11.65□□□□□ -0.54
IGHV3-53-201ENST00000390627 OR8U8P0C7N1 319 aa11.65□□□□□ -0.54
IGHV3-53-201ENST00000390627 DEFA4P12838 97 aa11.65□□□□□ -0.54
IGHV3-53-201ENST00000390627 RAB25P57735 213 aa11.65□□□□□ -0.54
IGHV3-53-201ENST00000390627 SRPXP78539 464 aa11.65□□□□□ -0.54
IGHV3-53-201ENST00000390627 RHOGP84095 191 aa11.65□□□□□ -0.54
IGHV3-53-201ENST00000390627 TMEM128Q5BJH2 165 aa11.65□□□□□ -0.54
IGHV3-53-201ENST00000390627 FAM219AQ8IW50 185 aa11.65□□□□□ -0.54
IGHV3-53-201ENST00000390627 NECAP1Q8NC96 275 aa11.65□□□□□ -0.54
IGHV3-53-201ENST00000390627 OR1N2Q8NGR9 330 aa11.65□□□□□ -0.54
IGHV3-53-201ENST00000390627 IL22RA2Q969J5 263 aa11.65□□□□□ -0.54
IGHV3-53-201ENST00000390627 TMEM56Q96MV1 263 aa11.65□□□□□ -0.54
IGHV3-53-201ENST00000390627 HINT2Q9BX68 163 aa11.65□□□□□ -0.54
IGHV3-53-201ENST00000390627 NDUFA4L2Q9NRX3 87 aa11.65□□□□□ -0.54
IGHV3-53-201ENST00000390627 TRBV9A0A0B4J1U6 114 aa11.64□□□□□ -0.55
IGHV3-53-201ENST00000390627 CYB5BO43169 146 aa11.64□□□□□ -0.55
IGHV3-53-201ENST00000390627 DUS4LO95620 317 aaKnown RBP11.64□□□□□ -0.55
IGHV3-53-201ENST00000390627 PRH1P02810 166 aa11.64□□□□□ -0.55
IGHV3-53-201ENST00000390627 REG1AP05451 166 aa11.64□□□□□ -0.55
IGHV3-53-201ENST00000390627 P0C879 139 aa11.64□□□□□ -0.55
IGHV3-53-201ENST00000390627 HIST1H1BP16401 226 aaKnown RBP11.64□□□□□ -0.55
IGHV3-53-201ENST00000390627 CCR6P51684 374 aa11.64□□□□□ -0.55
IGHV3-53-201ENST00000390627 TMEM187Q14656 261 aa11.64□□□□□ -0.55
IGHV3-53-201ENST00000390627 ZNF846Q147U1 533 aa11.64□□□□□ -0.55
IGHV3-53-201ENST00000390627 TMEM268Q5VZI3 342 aa11.64□□□□□ -0.55
IGHV3-53-201ENST00000390627 ZNF429Q86V71 674 aa11.64□□□□□ -0.55
IGHV3-53-201ENST00000390627 SELENOHQ8IZQ5 122 aaKnown RBP11.64□□□□□ -0.55
IGHV3-53-201ENST00000390627 CENPSQ8N2Z9 138 aa11.64□□□□□ -0.55
IGHV3-53-201ENST00000390627 RCC1LQ96I51 464 aaKnown RBP11.64□□□□□ -0.55
IGHV3-53-201ENST00000390627 PDCD10Q9BUL8 212 aa11.64□□□□□ -0.55
IGHV3-53-201ENST00000390627 ALX4Q9H161 411 aaPredicted RBP11.64□□□□□ -0.55
IGHV3-53-201ENST00000390627 TMEM56-RWDD3S4R434 201 aa11.64□□□□□ -0.55
IGHV3-53-201ENST00000390627 DBX1A6NMT0 343 aa11.63□□□□□ -0.55
IGHV3-53-201ENST00000390627 LINC01619G3V211 115 aa11.63□□□□□ -0.55
IGHV3-53-201ENST00000390627 OR2J3O76001 311 aa11.63□□□□□ -0.55
IGHV3-53-201ENST00000390627 NDUFB6O95139 128 aa11.63□□□□□ -0.55
IGHV3-53-201ENST00000390627 HSPB1P04792 205 aaKnown RBP11.63□□□□□ -0.55
IGHV3-53-201ENST00000390627 OR13C7P0DN81 318 aa11.63□□□□□ -0.55
IGHV3-53-201ENST00000390627 MECP2P51608 486 aaKnown RBP11.63□□□□□ -0.55
IGHV3-53-201ENST00000390627 SUPT4H1P63272 117 aaKnown RBP11.63□□□□□ -0.55
IGHV3-53-201ENST00000390627 PRCDQ00LT1 54 aa11.63□□□□□ -0.55
IGHV3-53-201ENST00000390627 DEFA5Q01523 94 aa11.63□□□□□ -0.55
IGHV3-53-201ENST00000390627 ATP5G2Q06055 141 aa11.63□□□□□ -0.55
IGHV3-53-201ENST00000390627 FAM209BQ5JX69 171 aa11.63□□□□□ -0.55
IGHV3-53-201ENST00000390627 LGI3Q8N145 548 aa11.63□□□□□ -0.55
IGHV3-53-201ENST00000390627 OR10W1Q8NGF6 305 aa11.63□□□□□ -0.55
IGHV3-53-201ENST00000390627 LHFPL5Q8TAF8 219 aa11.63□□□□□ -0.55
IGHV3-53-201ENST00000390627 MCRIP2Q9BUT9 160 aaKnown RBP11.63□□□□□ -0.55
IGHV3-53-201ENST00000390627 GPR61Q9BZJ8 451 aa11.63□□□□□ -0.55
IGHV3-53-201ENST00000390627 IGHV4OR15-8A0A075B7B6 117 aa11.62□□□□□ -0.55
IGHV3-53-201ENST00000390627 A0A087WW49 117 aa11.62□□□□□ -0.55
IGHV3-53-201ENST00000390627 LYRM1O43325 122 aa11.62□□□□□ -0.55
IGHV3-53-201ENST00000390627 VAMP1P23763 118 aa11.62□□□□□ -0.55
IGHV3-53-201ENST00000390627 BTCP35070 178 aa11.62□□□□□ -0.55
IGHV3-53-201ENST00000390627 UBE2MP61081 183 aaKnown RBP11.62□□□□□ -0.55
IGHV3-53-201ENST00000390627 HSPE1P61604 102 aaKnown RBP11.62□□□□□ -0.55
IGHV3-53-201ENST00000390627 WT1-ASQ06250 92 aa11.62□□□□□ -0.55
IGHV3-53-201ENST00000390627 EXOSC2Q13868 293 aaKnown RBP11.62□□□□□ -0.55
IGHV3-53-201ENST00000390627 IZUMO4Q1ZYL8 232 aa11.62□□□□□ -0.55
IGHV3-53-201ENST00000390627 KLK9Q2XQG4 91 aa11.62□□□□□ -0.55
IGHV3-53-201ENST00000390627 C15orf32Q32M92 178 aa11.62□□□□□ -0.55
IGHV3-53-201ENST00000390627 SAMD5Q5TGI4 173 aa11.62□□□□□ -0.55
IGHV3-53-201ENST00000390627 ZNF343Q6P1L6 599 aa11.62□□□□□ -0.55
IGHV3-53-201ENST00000390627 C19orf35Q6ZS72 473 aa11.62□□□□□ -0.55
IGHV3-53-201ENST00000390627 FANCD2OSQ96PS1 177 aa11.62□□□□□ -0.55
IGHV3-53-201ENST00000390627 PLEKHA3Q9HB20 300 aa11.62□□□□□ -0.55
IGHV3-53-201ENST00000390627 RANGRFQ9HD47 186 aaPredicted RBP11.62□□□□□ -0.55
IGHV3-53-201ENST00000390627 THYN1Q9P016 225 aa11.62□□□□□ -0.55
IGHV3-53-201ENST00000390627 FBXL7Q9UJT9 491 aa11.62□□□□□ -0.55
IGHV3-53-201ENST00000390627 KLK9Q9UKQ9 250 aa11.62□□□□□ -0.55
IGHV3-53-201ENST00000390627 IGLV11-55A0A075B6I3 123 aa11.61□□□□□ -0.55
IGHV3-53-201ENST00000390627 A0A0B4J293 547 aa11.61□□□□□ -0.55
IGHV3-53-201ENST00000390627 A0A0B4J2A0 478 aa11.61□□□□□ -0.55
IGHV3-53-201ENST00000390627 A0A0G2JRQ6 117 aa11.61□□□□□ -0.55
IGHV3-53-201ENST00000390627 PLA2G10O15496 165 aa11.61□□□□□ -0.55
IGHV3-53-201ENST00000390627 IFNA17P01571 189 aa11.61□□□□□ -0.55
IGHV3-53-201ENST00000390627 IGLL1P15814 213 aa11.61□□□□□ -0.55
IGHV3-53-201ENST00000390627 ZP3P21754 424 aa11.61□□□□□ -0.55
IGHV3-53-201ENST00000390627 SLC35G3Q8N808 338 aa11.61□□□□□ -0.55
IGHV3-53-201ENST00000390627 OR1L6Q8NGR2 347 aa11.61□□□□□ -0.55
IGHV3-53-201ENST00000390627 PEF1Q9UBV8 284 aaKnown RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms