RNA–Protein interactions for RNA: ENST00000319223.8

LRRC42-201, Transcript of leucine rich repeat containing 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC42, Length 1,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC42-201ENST00000319223 SUPT4H1P63272 117 aaKnown RBP12.82□□□□□ -0.36
LRRC42-201ENST00000319223 RHOGP84095 191 aa12.82□□□□□ -0.36
LRRC42-201ENST00000319223 OR1L8Q8NGR8 309 aa12.82□□□□□ -0.36
LRRC42-201ENST00000319223 SCGB3A2Q96PL1 93 aa12.82□□□□□ -0.36
LRRC42-201ENST00000319223 HINT2Q9BX68 163 aa12.82□□□□□ -0.36
LRRC42-201ENST00000319223 QTRT1Q9BXR0 403 aaKnown RBP12.82□□□□□ -0.36
LRRC42-201ENST00000319223 NOTCH3Q9UM47 2321 aa12.82□□□□□ -0.36
LRRC42-201ENST00000319223 ZNF257Q9Y2Q1 563 aa12.82□□□□□ -0.36
LRRC42-201ENST00000319223 C13orf42A0A1B0GVH6 325 aa12.81□□□□□ -0.36
LRRC42-201ENST00000319223 C15orf61A6NNL5 157 aa12.81□□□□□ -0.36
LRRC42-201ENST00000319223 OR2J3O76001 311 aa12.81□□□□□ -0.36
LRRC42-201ENST00000319223 TRAPPC2P0DI81 140 aa12.81□□□□□ -0.36
LRRC42-201ENST00000319223 TRAPPC2BP0DI82 140 aa12.81□□□□□ -0.36
LRRC42-201ENST00000319223 INPP1P49441 399 aa12.81□□□□□ -0.36
LRRC42-201ENST00000319223 WT1-ASQ06250 92 aa12.81□□□□□ -0.36
LRRC42-201ENST00000319223 ZNF616Q08AN1 781 aa12.81□□□□□ -0.36
LRRC42-201ENST00000319223 TMED4Q7Z7H5 227 aa12.81□□□□□ -0.36
LRRC42-201ENST00000319223 SLC25A42Q86VD7 318 aa12.81□□□□□ -0.36
LRRC42-201ENST00000319223 SELENOHQ8IZQ5 122 aaKnown RBP12.81□□□□□ -0.36
LRRC42-201ENST00000319223 PTTG2Q9NZH5 202 aa12.81□□□□□ -0.36
LRRC42-201ENST00000319223 PRNDQ9UKY0 176 aa12.81□□□□□ -0.36
LRRC42-201ENST00000319223 DMRT1Q9Y5R6 373 aa12.81□□□□□ -0.36
LRRC42-201ENST00000319223 NOTCH1P46531 2555 aa12.8□□□□□ -0.36
LRRC42-201ENST00000319223 A0A0B4J293 547 aa12.8□□□□□ -0.36
LRRC42-201ENST00000319223 ANKRD34BA5PLL1 514 aa12.8□□□□□ -0.36
LRRC42-201ENST00000319223 TRBV12-3P01733 135 aa12.8□□□□□ -0.36
LRRC42-201ENST00000319223 BTCP35070 178 aa12.8□□□□□ -0.36
LRRC42-201ENST00000319223 AKR1C2P52895 323 aa12.8□□□□□ -0.36
LRRC42-201ENST00000319223 SLURP1P55000 103 aa12.8□□□□□ -0.36
LRRC42-201ENST00000319223 TMEM187Q14656 261 aa12.8□□□□□ -0.36
LRRC42-201ENST00000319223 Q6ZRM9 215 aa12.8□□□□□ -0.36
LRRC42-201ENST00000319223 SGPP2Q8IWX5 399 aa12.8□□□□□ -0.36
LRRC42-201ENST00000319223 OR4A16Q8NH70 328 aa12.8□□□□□ -0.36
LRRC42-201ENST00000319223 TSC22D3Q99576 134 aa12.8□□□□□ -0.36
LRRC42-201ENST00000319223 MEGF8Q7Z7M0 2845 aa12.8□□□□□ -0.36
LRRC42-201ENST00000319223 A0A0G2JLM5 398 aa12.79□□□□□ -0.36
LRRC42-201ENST00000319223 PLA2G10O15496 165 aa12.79□□□□□ -0.36
LRRC42-201ENST00000319223 B3GALNT1O75752 331 aa12.79□□□□□ -0.36
LRRC42-201ENST00000319223 NDUFB8O95169 186 aa12.79□□□□□ -0.36
LRRC42-201ENST00000319223 DHODHQ02127 395 aa12.79□□□□□ -0.36
LRRC42-201ENST00000319223 LINC00299Q6ZSB3 139 aa12.79□□□□□ -0.36
LRRC42-201ENST00000319223 GALNT14Q96FL9 552 aa12.79□□□□□ -0.36
LRRC42-201ENST00000319223 USMG5Q96IX5 58 aa12.79□□□□□ -0.36
LRRC42-201ENST00000319223 SLC25A21Q9BQT8 299 aaPredicted RBP12.79□□□□□ -0.36
LRRC42-201ENST00000319223 HSPB1P04792 205 aaKnown RBP12.79□□□□□ -0.36
LRRC42-201ENST00000319223 OR13C7P0DN81 318 aa12.79□□□□□ -0.36
LRRC42-201ENST00000319223 BEAN1Q3B7T3 259 aa12.79□□□□□ -0.36
LRRC42-201ENST00000319223 TMEM268Q5VZI3 342 aa12.79□□□□□ -0.36
LRRC42-201ENST00000319223 ZNF343Q6P1L6 599 aa12.79□□□□□ -0.36
LRRC42-201ENST00000319223 OR5B3Q8NH48 314 aa12.79□□□□□ -0.36
LRRC42-201ENST00000319223 DCUN1D4Q92564 292 aa12.79□□□□□ -0.36
LRRC42-201ENST00000319223 DPF1Q92782 380 aa12.79□□□□□ -0.36
LRRC42-201ENST00000319223 TMEM56Q96MV1 263 aa12.79□□□□□ -0.36
LRRC42-201ENST00000319223 FKBP11Q9NYL4 201 aa12.79□□□□□ -0.36
LRRC42-201ENST00000319223 FBXL7Q9UJT9 491 aa12.79□□□□□ -0.36
LRRC42-201ENST00000319223 S4R3C0 116 aa12.79□□□□□ -0.36
LRRC42-201ENST00000319223 TMEM56-RWDD3S4R434 201 aa12.79□□□□□ -0.36
LRRC42-201ENST00000319223 IGLV11-55A0A075B6I3 123 aa12.78□□□□□ -0.36
LRRC42-201ENST00000319223 NAP1L6A6NFF2 107 aa12.78□□□□□ -0.36
LRRC42-201ENST00000319223 LINC01619G3V211 115 aa12.78□□□□□ -0.36
LRRC42-201ENST00000319223 OR8U8P0C7N1 319 aa12.78□□□□□ -0.36
LRRC42-201ENST00000319223 KLK9Q2XQG4 91 aa12.78□□□□□ -0.36
LRRC42-201ENST00000319223 C15orf32Q32M92 178 aa12.78□□□□□ -0.36
LRRC42-201ENST00000319223 SPINK9Q5DT21 86 aa12.78□□□□□ -0.36
LRRC42-201ENST00000319223 NECAP1Q8NC96 275 aa12.78□□□□□ -0.36
LRRC42-201ENST00000319223 DLX4Q92988 240 aaPredicted RBP12.78□□□□□ -0.36
LRRC42-201ENST00000319223 RBPMSQ93062 196 aaKnown RBP12.78□□□□□ -0.36
LRRC42-201ENST00000319223 GPR146Q96CH1 333 aa12.78□□□□□ -0.36
LRRC42-201ENST00000319223 RCC1LQ96I51 464 aaKnown RBP12.78□□□□□ -0.36
LRRC42-201ENST00000319223 SRSF8Q9BRL6 282 aaKnown RBP12.78□□□□□ -0.36
LRRC42-201ENST00000319223 KLK9Q9UKQ9 250 aa12.78□□□□□ -0.36
LRRC42-201ENST00000319223 FLVCR2Q9UPI3 526 aa12.78□□□□□ -0.36
LRRC42-201ENST00000319223 KCNIP3Q9Y2W7 256 aa12.78□□□□□ -0.36
LRRC42-201ENST00000319223 FAM223BA6NKX1 122 aa12.77□□□□□ -0.36
LRRC42-201ENST00000319223 IGHV3-23P01764 117 aa12.77□□□□□ -0.36
LRRC42-201ENST00000319223 MFAP2P55001 183 aa12.77□□□□□ -0.36
LRRC42-201ENST00000319223 DEFA6Q01524 100 aa12.77□□□□□ -0.36
LRRC42-201ENST00000319223 ATP5G2Q06055 141 aa12.77□□□□□ -0.36
LRRC42-201ENST00000319223 FAM223AQ8IWN6 122 aa12.77□□□□□ -0.36
LRRC42-201ENST00000319223 LSM10Q969L4 123 aaKnown RBP12.77□□□□□ -0.36
LRRC42-201ENST00000319223 RRNAD1Q96FB5 475 aaKnown RBP12.77□□□□□ -0.36
LRRC42-201ENST00000319223 ST8SIA3O43173 380 aa12.76□□□□□ -0.37
LRRC42-201ENST00000319223 ATG12O94817 140 aa12.76□□□□□ -0.37
LRRC42-201ENST00000319223 NDUFB6O95139 128 aa12.76□□□□□ -0.37
LRRC42-201ENST00000319223 DEFA4P12838 97 aa12.76□□□□□ -0.37
LRRC42-201ENST00000319223 HSPE1P61604 102 aaKnown RBP12.76□□□□□ -0.37
LRRC42-201ENST00000319223 EXOSC2Q13868 293 aaKnown RBP12.76□□□□□ -0.37
LRRC42-201ENST00000319223 RBMS2Q15434 407 aaKnown RBP12.76□□□□□ -0.37
LRRC42-201ENST00000319223 ZNF429Q86V71 674 aa12.76□□□□□ -0.37
LRRC42-201ENST00000319223 SLC35G3Q8N808 338 aa12.76□□□□□ -0.37
LRRC42-201ENST00000319223 RNASE11Q8TAA1 199 aaKnown RBP12.76□□□□□ -0.37
LRRC42-201ENST00000319223 PRB2P02812 416 aaPredicted RBP12.76□□□□□ -0.37
LRRC42-201ENST00000319223 MECP2P51608 486 aaKnown RBP12.76□□□□□ -0.37
LRRC42-201ENST00000319223 PRCDQ00LT1 54 aa12.76□□□□□ -0.37
LRRC42-201ENST00000319223 TMEM128Q5BJH2 165 aa12.76□□□□□ -0.37
LRRC42-201ENST00000319223 KPRPQ5T749 579 aaPredicted RBP12.76□□□□□ -0.37
LRRC42-201ENST00000319223 THOC7Q6I9Y2 204 aaKnown RBP12.76□□□□□ -0.37
LRRC42-201ENST00000319223 S100ZQ8WXG8 99 aa12.76□□□□□ -0.37
LRRC42-201ENST00000319223 RANGRFQ9HD47 186 aaPredicted RBP12.76□□□□□ -0.37
LRRC42-201ENST00000319223 PEF1Q9UBV8 284 aaKnown RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms