RNA–Protein interactions for RNA: ENST00000287814.4

TIMP4-201, Transcript of TIMP metallopeptidase inhibitor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP4, Length 1,650 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4-201ENST00000287814 MYCNOSP40205 109 aa15.38■□□□□ 0.05
TIMP4-201ENST00000287814 RUNX1Q01196 453 aa15.38■□□□□ 0.05
TIMP4-201ENST00000287814 DHODHQ02127 395 aa15.38■□□□□ 0.05
TIMP4-201ENST00000287814 LINC00482Q8N8I6 264 aa15.38■□□□□ 0.05
TIMP4-201ENST00000287814 WFDC9Q8NEX5 89 aa15.38■□□□□ 0.05
TIMP4-201ENST00000287814 OR1L8Q8NGR8 309 aa15.38■□□□□ 0.05
TIMP4-201ENST00000287814 TRBV9A0A0B4J1U6 114 aa15.38■□□□□ 0.05
TIMP4-201ENST00000287814 NDUFB6O95139 128 aa15.38■□□□□ 0.05
TIMP4-201ENST00000287814 TRAPPC2P0DI81 140 aa15.38■□□□□ 0.05
TIMP4-201ENST00000287814 TRAPPC2BP0DI82 140 aa15.38■□□□□ 0.05
TIMP4-201ENST00000287814 CTRB1P17538 263 aa15.38■□□□□ 0.05
TIMP4-201ENST00000287814 PSMB6P28072 239 aa15.38■□□□□ 0.05
TIMP4-201ENST00000287814 AKR1C2P52895 323 aa15.38■□□□□ 0.05
TIMP4-201ENST00000287814 RBMS2Q15434 407 aaKnown RBP15.38■□□□□ 0.05
TIMP4-201ENST00000287814 CTRB2Q6GPI1 263 aa15.38■□□□□ 0.05
TIMP4-201ENST00000287814 Q6ZRM9 215 aa15.38■□□□□ 0.05
TIMP4-201ENST00000287814 OR11H1Q8NG94 326 aa15.38■□□□□ 0.05
TIMP4-201ENST00000287814 TMEM56Q96MV1 263 aa15.38■□□□□ 0.05
TIMP4-201ENST00000287814 C7orf50Q9BRJ6 194 aaKnown RBP15.38■□□□□ 0.05
TIMP4-201ENST00000287814 FLVCR2Q9UPI3 526 aa15.38■□□□□ 0.05
TIMP4-201ENST00000287814 KCNIP3Q9Y2W7 256 aa15.38■□□□□ 0.05
TIMP4-201ENST00000287814 TMEM56-RWDD3S4R434 201 aa15.38■□□□□ 0.05
TIMP4-201ENST00000287814 WT1-ASQ06250 92 aa15.37■□□□□ 0.05
TIMP4-201ENST00000287814 TMEM268Q5VZI3 342 aa15.37■□□□□ 0.05
TIMP4-201ENST00000287814 SLC25A42Q86VD7 318 aa15.37■□□□□ 0.05
TIMP4-201ENST00000287814 OR4A16Q8NH70 328 aa15.37■□□□□ 0.05
TIMP4-201ENST00000287814 RBPMSQ93062 196 aaKnown RBP15.37■□□□□ 0.05
TIMP4-201ENST00000287814 FANCD2OSQ96PS1 177 aa15.37■□□□□ 0.05
TIMP4-201ENST00000287814 HINT2Q9BX68 163 aa15.37■□□□□ 0.05
TIMP4-201ENST00000287814 ZNF257Q9Y2Q1 563 aa15.37■□□□□ 0.05
TIMP4-201ENST00000287814 CENPXA8MT69 81 aa15.36■□□□□ 0.05
TIMP4-201ENST00000287814 LGALS1P09382 135 aaKnown RBP15.36■□□□□ 0.05
TIMP4-201ENST00000287814 FHL3Q13643 280 aa15.36■□□□□ 0.05
TIMP4-201ENST00000287814 TMEM128Q5BJH2 165 aa15.36■□□□□ 0.05
TIMP4-201ENST00000287814 OR5B3Q8NH48 314 aa15.36■□□□□ 0.05
TIMP4-201ENST00000287814 FKBP11Q9NYL4 201 aa15.36■□□□□ 0.05
TIMP4-201ENST00000287814 LYRM1O43325 122 aa15.35■□□□□ 0.05
TIMP4-201ENST00000287814 RHOGP84095 191 aa15.35■□□□□ 0.05
TIMP4-201ENST00000287814 ZNF846Q147U1 533 aa15.35■□□□□ 0.05
TIMP4-201ENST00000287814 OR1N2Q8NGR9 330 aa15.35■□□□□ 0.05
TIMP4-201ENST00000287814 SRSF8Q9BRL6 282 aaKnown RBP15.35■□□□□ 0.05
TIMP4-201ENST00000287814 DMRT1Q9Y5R6 373 aa15.35■□□□□ 0.05
TIMP4-201ENST00000287814 NOTCH3Q9UM47 2321 aa15.35■□□□□ 0.05
TIMP4-201ENST00000287814 OR2J3O76001 311 aa15.35■□□□□ 0.05
TIMP4-201ENST00000287814 ATG12O94817 140 aa15.35■□□□□ 0.05
TIMP4-201ENST00000287814 CENPSQ8N2Z9 138 aa15.35■□□□□ 0.05
TIMP4-201ENST00000287814 GPR146Q96CH1 333 aa15.35■□□□□ 0.05
TIMP4-201ENST00000287814 RRNAD1Q96FB5 475 aaKnown RBP15.35■□□□□ 0.05
TIMP4-201ENST00000287814 A0A0G2JLM5 398 aa15.34■□□□□ 0.05
TIMP4-201ENST00000287814 C13orf42A0A1B0GVH6 325 aa15.34■□□□□ 0.05
TIMP4-201ENST00000287814 OR13C7P0DN81 318 aa15.34■□□□□ 0.05
TIMP4-201ENST00000287814 CD33P20138 364 aa15.34■□□□□ 0.05
TIMP4-201ENST00000287814 HSPE1P61604 102 aaKnown RBP15.34■□□□□ 0.05
TIMP4-201ENST00000287814 IFITM3Q01628 133 aa15.34■□□□□ 0.05
TIMP4-201ENST00000287814 PPP1R1AQ13522 171 aa15.34■□□□□ 0.05
TIMP4-201ENST00000287814 KLK9Q2XQG4 91 aa15.34■□□□□ 0.05
TIMP4-201ENST00000287814 ZNF429Q86V71 674 aa15.34■□□□□ 0.05
TIMP4-201ENST00000287814 SLC35G3Q8N808 338 aa15.34■□□□□ 0.05
TIMP4-201ENST00000287814 WDR12Q9GZL7 423 aaKnown RBP15.34■□□□□ 0.05
TIMP4-201ENST00000287814 KLK9Q9UKQ9 250 aa15.34■□□□□ 0.05
TIMP4-201ENST00000287814 TBC1D24Q9ULP9 559 aa15.34■□□□□ 0.05
TIMP4-201ENST00000287814 IGHV4OR15-8A0A075B7B6 117 aa15.33■□□□□ 0.04
TIMP4-201ENST00000287814 A0A087WW49 117 aa15.33■□□□□ 0.04
TIMP4-201ENST00000287814 G3V4G9 280 aa15.33■□□□□ 0.04
TIMP4-201ENST00000287814 NDUFB8O95169 186 aa15.33■□□□□ 0.04
TIMP4-201ENST00000287814 ANKRD55Q3KP44 614 aa15.33■□□□□ 0.04
TIMP4-201ENST00000287814 OXLD1Q5BKU9 147 aa15.33■□□□□ 0.04
TIMP4-201ENST00000287814 SPINK9Q5DT21 86 aa15.33■□□□□ 0.04
TIMP4-201ENST00000287814 THOC7Q6I9Y2 204 aaKnown RBP15.33■□□□□ 0.04
TIMP4-201ENST00000287814 LYZL2Q7Z4W2 148 aa15.33■□□□□ 0.04
TIMP4-201ENST00000287814 RNASE11Q8TAA1 199 aaKnown RBP15.33■□□□□ 0.04
TIMP4-201ENST00000287814 IL22RA2Q969J5 263 aa15.33■□□□□ 0.04
TIMP4-201ENST00000287814 LSM10Q969L4 123 aaKnown RBP15.33■□□□□ 0.04
TIMP4-201ENST00000287814 USMG5Q96IX5 58 aa15.33■□□□□ 0.04
TIMP4-201ENST00000287814 ST8SIA3O43173 380 aa15.32■□□□□ 0.04
TIMP4-201ENST00000287814 IGLL1P15814 213 aa15.32■□□□□ 0.04
TIMP4-201ENST00000287814 VAMP1P23763 118 aa15.32■□□□□ 0.04
TIMP4-201ENST00000287814 RAB25P57735 213 aa15.32■□□□□ 0.04
TIMP4-201ENST00000287814 ZNF616Q08AN1 781 aa15.32■□□□□ 0.04
TIMP4-201ENST00000287814 ZNF343Q6P1L6 599 aa15.32■□□□□ 0.04
TIMP4-201ENST00000287814 NECAP1Q8NC96 275 aa15.32■□□□□ 0.04
TIMP4-201ENST00000287814 FBXL7Q9UJT9 491 aa15.32■□□□□ 0.04
TIMP4-201ENST00000287814 IGLV11-55A0A075B6I3 123 aa15.32■□□□□ 0.04
TIMP4-201ENST00000287814 ANKRD34BA5PLL1 514 aa15.32■□□□□ 0.04
TIMP4-201ENST00000287814 FAM223BA6NKX1 122 aa15.32■□□□□ 0.04
TIMP4-201ENST00000287814 UPK1BO75841 260 aa15.32■□□□□ 0.04
TIMP4-201ENST00000287814 SFT2D2O95562 160 aa15.32■□□□□ 0.04
TIMP4-201ENST00000287814 TRBV12-3P01733 135 aa15.32■□□□□ 0.04
TIMP4-201ENST00000287814 ANXA3P12429 323 aa15.32■□□□□ 0.04
TIMP4-201ENST00000287814 DEFA4P12838 97 aa15.32■□□□□ 0.04
TIMP4-201ENST00000287814 MFAP2P55001 183 aa15.32■□□□□ 0.04
TIMP4-201ENST00000287814 PRCDQ00LT1 54 aa15.32■□□□□ 0.04
TIMP4-201ENST00000287814 C1QL4Q86Z23 238 aa15.32■□□□□ 0.04
TIMP4-201ENST00000287814 FAM219AQ8IW50 185 aa15.32■□□□□ 0.04
TIMP4-201ENST00000287814 FAM223AQ8IWN6 122 aa15.32■□□□□ 0.04
TIMP4-201ENST00000287814 NOTCH1P46531 2555 aa15.31■□□□□ 0.04
TIMP4-201ENST00000287814 HSPB1P04792 205 aaKnown RBP15.31■□□□□ 0.04
TIMP4-201ENST00000287814 ANXA7P20073 488 aaKnown RBP15.31■□□□□ 0.04
TIMP4-201ENST00000287814 SLURP1P55000 103 aa15.31■□□□□ 0.04
TIMP4-201ENST00000287814 ATP5G2Q06055 141 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms