RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 SLC17A3O00476 420 aa20.91■□□□□ 0.94
RAB40C-201ENST00000248139 CEACAM4O75871 244 aa20.91■□□□□ 0.94
RAB40C-201ENST00000248139 GCHFRP30047 84 aa20.91■□□□□ 0.94
RAB40C-201ENST00000248139 SRP14P37108 136 aaKnown RBP20.91■□□□□ 0.94
RAB40C-201ENST00000248139 HLA-DRB5Q30154 266 aa20.91■□□□□ 0.94
RAB40C-201ENST00000248139 PLXNB1O43157 2135 aa20.91■□□□□ 0.94
RAB40C-201ENST00000248139 ZNF705GA8MUZ8 300 aaPredicted RBP20.91■□□□□ 0.94
RAB40C-201ENST00000248139 RPL31P62899 125 aaKnown RBP20.91■□□□□ 0.94
RAB40C-201ENST00000248139 C1orf185Q5T7R7 199 aa20.91■□□□□ 0.94
RAB40C-201ENST00000248139 KCNIP4Q6PIL6 250 aa20.91■□□□□ 0.94
RAB40C-201ENST00000248139 C1orf174Q8IYL3 243 aa20.91■□□□□ 0.94
RAB40C-201ENST00000248139 CT45A6P0DMU7 189 aa20.91■□□□□ 0.94
RAB40C-201ENST00000248139 CT45A5P0DMU8 189 aa20.91■□□□□ 0.94
RAB40C-201ENST00000248139 CT45A7P0DMV0 189 aa20.91■□□□□ 0.94
RAB40C-201ENST00000248139 REG1BP48304 166 aa20.91■□□□□ 0.94
RAB40C-201ENST00000248139 ZNF439Q8NDP4 499 aa20.91■□□□□ 0.94
RAB40C-201ENST00000248139 OR10W1Q8NGF6 305 aa20.91■□□□□ 0.94
RAB40C-201ENST00000248139 J3QR06 171 aa20.9■□□□□ 0.94
RAB40C-201ENST00000248139 TM4SF5O14894 197 aa20.9■□□□□ 0.94
RAB40C-201ENST00000248139 C14orf144Q96I85 54 aa20.9■□□□□ 0.94
RAB40C-201ENST00000248139 FOXA2Q9Y261 457 aaPredicted RBP20.9■□□□□ 0.94
RAB40C-201ENST00000248139 TRAPPC1Q9Y5R8 145 aa20.9■□□□□ 0.94
RAB40C-201ENST00000248139 PTPRZ1P23471 2315 aaPredicted RBP20.89■□□□□ 0.94
RAB40C-201ENST00000248139 IGKV1OR2-108A0A075B7D4 117 aa20.89■□□□□ 0.93
RAB40C-201ENST00000248139 TRGV8A0A0C4DH27 118 aa20.89■□□□□ 0.93
RAB40C-201ENST00000248139 FRMD6-AS1P0C7T7 363 aa20.89■□□□□ 0.93
RAB40C-201ENST00000248139 K7EN84 100 aa20.89■□□□□ 0.93
RAB40C-201ENST00000248139 TIMP3P35625 211 aa20.89■□□□□ 0.93
RAB40C-201ENST00000248139 KIR2DS2P43631 304 aa20.89■□□□□ 0.93
RAB40C-201ENST00000248139 TMEM256Q8N2U0 113 aa20.89■□□□□ 0.93
RAB40C-201ENST00000248139 FAM222BQ8WU58 562 aa20.89■□□□□ 0.93
RAB40C-201ENST00000248139 MDFIC2A0A1B0GVS7 189 aa20.88■□□□□ 0.93
RAB40C-201ENST00000248139 NUPR1O60356 82 aa20.88■□□□□ 0.93
RAB40C-201ENST00000248139 CCL3L1P16619 93 aa20.88■□□□□ 0.93
RAB40C-201ENST00000248139 CD40P25942 277 aa20.88■□□□□ 0.93
RAB40C-201ENST00000248139 CISD2Q8N5K1 135 aaKnown RBP20.88■□□□□ 0.93
RAB40C-201ENST00000248139 RBMXL3Q8N7X1 1067 aaKnown RBP20.88■□□□□ 0.93
RAB40C-201ENST00000248139 IMMP2LQ96T52 175 aa20.88■□□□□ 0.93
RAB40C-201ENST00000248139 NAV3Q8IVL0 2385 aa20.88■□□□□ 0.93
RAB40C-201ENST00000248139 JOSD1Q15040 202 aaPredicted RBP20.88■□□□□ 0.93
RAB40C-201ENST00000248139 TP53TG5Q9Y2B4 290 aa20.88■□□□□ 0.93
RAB40C-201ENST00000248139 ZNF318Q5VUA4 2279 aa20.87■□□□□ 0.93
RAB40C-201ENST00000248139 OR5I1Q13606 314 aa20.87■□□□□ 0.93
RAB40C-201ENST00000248139 SLC35D1Q9NTN3 355 aa20.87■□□□□ 0.93
RAB40C-201ENST00000248139 CCKARP32238 428 aa20.87■□□□□ 0.93
RAB40C-201ENST00000248139 SELENOVP59797 346 aa20.87■□□□□ 0.93
RAB40C-201ENST00000248139 RPL15P61313 204 aaKnown RBP20.87■□□□□ 0.93
RAB40C-201ENST00000248139 ZNF788Q6ZQV5 615 aa20.87■□□□□ 0.93
RAB40C-201ENST00000248139 TMEM144Q7Z5S9 345 aa20.87■□□□□ 0.93
RAB40C-201ENST00000248139 IL19Q9UHD0 177 aa20.87■□□□□ 0.93
RAB40C-201ENST00000248139 IGHV3-48P01763 117 aa20.86■□□□□ 0.93
RAB40C-201ENST00000248139 TYMSP04818 313 aa20.86■□□□□ 0.93
RAB40C-201ENST00000248139 LINC00869P0C866 280 aa20.86■□□□□ 0.93
RAB40C-201ENST00000248139 CNN1P51911 297 aaKnown RBP20.86■□□□□ 0.93
RAB40C-201ENST00000248139 TMEM249Q2WGJ8 235 aa20.86■□□□□ 0.93
RAB40C-201ENST00000248139 ELOVL5Q9NYP7 299 aa20.86■□□□□ 0.93
RAB40C-201ENST00000248139 GRIFINA4D1Z8 144 aa20.86■□□□□ 0.93
RAB40C-201ENST00000248139 GATA4P43694 442 aa20.86■□□□□ 0.93
RAB40C-201ENST00000248139 RHOBP62745 196 aa20.86■□□□□ 0.93
RAB40C-201ENST00000248139 ASPHD1Q5U4P2 390 aa20.86■□□□□ 0.93
RAB40C-201ENST00000248139 Q6ZS92 163 aa20.86■□□□□ 0.93
RAB40C-201ENST00000248139 WFDC8Q8IUA0 241 aa20.86■□□□□ 0.93
RAB40C-201ENST00000248139 PLEKHA3Q9HB20 300 aa20.86■□□□□ 0.93
RAB40C-201ENST00000248139 ZMAT5Q9UDW3 170 aaKnown RBP20.86■□□□□ 0.93
RAB40C-201ENST00000248139 APC2O95996 2303 aa20.86■□□□□ 0.93
RAB40C-201ENST00000248139 A8MXE2 369 aa20.85■□□□□ 0.93
RAB40C-201ENST00000248139 COA6Q5JTJ3 125 aaKnown RBP20.85■□□□□ 0.93
RAB40C-201ENST00000248139 CUL9Q8IWT3 2517 aa20.85■□□□□ 0.93
RAB40C-201ENST00000248139 TPRP12270 2363 aaKnown RBP20.85■□□□□ 0.93
RAB40C-201ENST00000248139 A0A087X0M5 115 aa20.85■□□□□ 0.93
RAB40C-201ENST00000248139 TEX50A0A1B0GTY4 177 aa20.85■□□□□ 0.93
RAB40C-201ENST00000248139 A0A1B0GX30 115 aa20.85■□□□□ 0.93
RAB40C-201ENST00000248139 FCN3O75636 299 aa20.85■□□□□ 0.93
RAB40C-201ENST00000248139 OR10J4P0C629 311 aa20.85■□□□□ 0.93
RAB40C-201ENST00000248139 DDTP30046 118 aa20.85■□□□□ 0.93
RAB40C-201ENST00000248139 DIAPH2-AS1Q14236 149 aa20.85■□□□□ 0.93
RAB40C-201ENST00000248139 PSG5Q15238 335 aa20.85■□□□□ 0.93
RAB40C-201ENST00000248139 TEX38Q6PEX7 206 aa20.85■□□□□ 0.93
RAB40C-201ENST00000248139 OR9G1Q8NH87 305 aa20.85■□□□□ 0.93
RAB40C-201ENST00000248139 CSMD1Q96PZ7 3565 aa20.85■□□□□ 0.93
RAB40C-201ENST00000248139 E7EUB6 86 aa20.84■□□□□ 0.93
RAB40C-201ENST00000248139 MRPL41Q8IXM3 137 aaKnown RBP20.84■□□□□ 0.93
RAB40C-201ENST00000248139 ACY3Q96HD9 319 aa20.84■□□□□ 0.93
RAB40C-201ENST00000248139 SNRPCP09234 159 aaKnown RBP20.84■□□□□ 0.93
RAB40C-201ENST00000248139 OR4A8P0C604 315 aa20.84■□□□□ 0.93
RAB40C-201ENST00000248139 SAA1P0DJI8 122 aaPredicted RBP20.84■□□□□ 0.93
RAB40C-201ENST00000248139 CD33P20138 364 aa20.84■□□□□ 0.93
RAB40C-201ENST00000248139 PRR20EP86478 221 aa20.84■□□□□ 0.93
RAB40C-201ENST00000248139 PRR20CP86479 221 aa20.84■□□□□ 0.93
RAB40C-201ENST00000248139 PRR20DP86480 221 aa20.84■□□□□ 0.93
RAB40C-201ENST00000248139 PRR20BP86481 221 aa20.84■□□□□ 0.93
RAB40C-201ENST00000248139 PRR20AP86496 221 aa20.84■□□□□ 0.93
RAB40C-201ENST00000248139 LURAP1LQ8IV03 231 aa20.84■□□□□ 0.93
RAB40C-201ENST00000248139 ZNF664Q8N3J9 261 aa20.84■□□□□ 0.93
RAB40C-201ENST00000248139 OR10G8Q8NGN5 311 aa20.84■□□□□ 0.93
RAB40C-201ENST00000248139 RPUSD1Q9UJJ7 312 aaKnown RBP20.84■□□□□ 0.93
RAB40C-201ENST00000248139 DVL1O14640 695 aa20.83■□□□□ 0.93
RAB40C-201ENST00000248139 KLK10O43240 276 aa20.83■□□□□ 0.93
RAB40C-201ENST00000248139 CBLN1P23435 193 aa20.83■□□□□ 0.93
RAB40C-201ENST00000248139 PKIAP61925 76 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms