RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 SPANXDQ9BXN6 97 aa6.99□□□□□ -1.29
APOB-201ENST00000233242 TBX6O95947 436 aaPredicted RBP6.99□□□□□ -1.29
APOB-201ENST00000233242 SRSF3P84103 164 aaKnown RBP6.99□□□□□ -1.29
APOB-201ENST00000233242 GAGE13Q4V321 117 aa6.99□□□□□ -1.29
APOB-201ENST00000233242 SGK494Q96LW2 274 aa6.99□□□□□ -1.29
APOB-201ENST00000233242 BEX4Q9NWD9 120 aaPredicted RBP6.99□□□□□ -1.29
APOB-201ENST00000233242 PHF3Q92576 2039 aaKnown RBP6.99□□□□□ -1.29
APOB-201ENST00000233242 A8MWV9 139 aa6.99□□□□□ -1.29
APOB-201ENST00000233242 ESDP10768 282 aa6.99□□□□□ -1.29
APOB-201ENST00000233242 SAMD5Q5TGI4 173 aa6.99□□□□□ -1.29
APOB-201ENST00000233242 UMODP07911 640 aa6.99□□□□□ -1.29
APOB-201ENST00000233242 DNM1P46Q6ZS02 220 aa6.99□□□□□ -1.29
APOB-201ENST00000233242 ST6GALNAC3Q8NDV1 305 aa6.99□□□□□ -1.29
APOB-201ENST00000233242 FOXC2Q99958 501 aa6.99□□□□□ -1.29
APOB-201ENST00000233242 SMIM10L1P0DMW3 83 aa6.99□□□□□ -1.29
APOB-201ENST00000233242 SMIM10Q96HG1 83 aa6.99□□□□□ -1.29
APOB-201ENST00000233242 IFI27L2Q9H2X8 130 aa6.99□□□□□ -1.29
APOB-201ENST00000233242 IDI2-AS1Q9NZ38 188 aa6.99□□□□□ -1.29
APOB-201ENST00000233242 ADRA2AP08913 450 aa6.99□□□□□ -1.29
APOB-201ENST00000233242 GAGE2BQ13066 116 aa6.99□□□□□ -1.29
APOB-201ENST00000233242 GAGE2EQ4V326 116 aa6.99□□□□□ -1.29
APOB-201ENST00000233242 HCP5Q6MZN7 132 aa6.99□□□□□ -1.29
APOB-201ENST00000233242 TEX38Q6PEX7 206 aa6.99□□□□□ -1.29
APOB-201ENST00000233242 OR5P3Q8WZ94 311 aa6.99□□□□□ -1.29
APOB-201ENST00000233242 GAGE2DQ9UEU5 116 aa6.99□□□□□ -1.29
APOB-201ENST00000233242 LY96Q9Y6Y9 160 aa6.99□□□□□ -1.29
APOB-201ENST00000233242 IGHV1OR15-9A0A0B4J2B8 117 aa6.99□□□□□ -1.29
APOB-201ENST00000233242 ACSF3Q4G176 576 aaPredicted RBP6.99□□□□□ -1.29
APOB-201ENST00000233242 MAGEA5P43359 124 aa6.98□□□□□ -1.29
APOB-201ENST00000233242 ERVK11-1P61568 191 aa6.98□□□□□ -1.29
APOB-201ENST00000233242 ZNF441Q8N8Z8 693 aa6.98□□□□□ -1.29
APOB-201ENST00000233242 MYO7BQ6PIF6 2116 aa6.98□□□□□ -1.29
APOB-201ENST00000233242 PPIAL4EA0A075B759 164 aa6.98□□□□□ -1.29
APOB-201ENST00000233242 DPM2O94777 84 aa6.98□□□□□ -1.29
APOB-201ENST00000233242 HBDP02042 147 aa6.98□□□□□ -1.29
APOB-201ENST00000233242 FAM106CPP0CH98 169 aa6.98□□□□□ -1.29
APOB-201ENST00000233242 PPIAL4FP0DN26 164 aa6.98□□□□□ -1.29
APOB-201ENST00000233242 CEACAM1P13688 526 aa6.98□□□□□ -1.29
APOB-201ENST00000233242 LINC00305Q7Z4B0 112 aa6.98□□□□□ -1.29
APOB-201ENST00000233242 PPIAL4AQ9Y536 164 aa6.98□□□□□ -1.29
APOB-201ENST00000233242 FAM181BA6NEQ2 426 aa6.98□□□□□ -1.29
APOB-201ENST00000233242 SRSF4Q08170 494 aaKnown RBP6.98□□□□□ -1.29
APOB-201ENST00000233242 LHX8Q68G74 356 aa6.98□□□□□ -1.29
APOB-201ENST00000233242 NRTNQ99748 197 aa6.98□□□□□ -1.29
APOB-201ENST00000233242 FNDC4Q9H6D8 234 aaPredicted RBP6.98□□□□□ -1.29
APOB-201ENST00000233242 C2CD4DB7Z1M9 353 aa6.98□□□□□ -1.29
APOB-201ENST00000233242 SNRPCP09234 159 aaKnown RBP6.98□□□□□ -1.29
APOB-201ENST00000233242 GDF15Q99988 308 aa6.98□□□□□ -1.29
APOB-201ENST00000233242 CELA2BP08218 269 aaPredicted RBP6.98□□□□□ -1.29
APOB-201ENST00000233242 ADMP35318 185 aa6.98□□□□□ -1.29
APOB-201ENST00000233242 CKS1BP61024 79 aa6.98□□□□□ -1.29
APOB-201ENST00000233242 ACTL10Q5JWF8 245 aa6.98□□□□□ -1.29
APOB-201ENST00000233242 LINC00114Q6XXX2 140 aa6.98□□□□□ -1.29
APOB-201ENST00000233242 IGHV3OR15-7A0A075B7D8 119 aa6.98□□□□□ -1.29
APOB-201ENST00000233242 OR9G1Q8NH87 305 aa6.98□□□□□ -1.29
APOB-201ENST00000233242 H0YIZ8 118 aa6.98□□□□□ -1.29
APOB-201ENST00000233242 CGAP01215 116 aa6.98□□□□□ -1.29
APOB-201ENST00000233242 SRSF7Q16629 238 aaKnown RBP eCLIP6.98□□□□□ -1.29
APOB-201ENST00000233242 PYY3Q5JQD4 70 aa6.98□□□□□ -1.29
APOB-201ENST00000233242 ST6GALNAC6Q969X2 333 aa6.98□□□□□ -1.29
APOB-201ENST00000233242 ZNF703Q9H7S9 590 aaPredicted RBP6.98□□□□□ -1.29
APOB-201ENST00000233242 COL6A6A6NMZ7 2263 aa6.98□□□□□ -1.29
APOB-201ENST00000233242 SPINT1O43278 529 aa6.98□□□□□ -1.29
APOB-201ENST00000233242 DCAF10Q5QP82 559 aa6.98□□□□□ -1.29
APOB-201ENST00000233242 ZNF479Q96JC4 524 aa6.98□□□□□ -1.29
APOB-201ENST00000233242 J3QRE1 110 aa6.98□□□□□ -1.29
APOB-201ENST00000233242 FCGR2BP31994 310 aaPredicted RBP6.98□□□□□ -1.29
APOB-201ENST00000233242 FAM90A1Q86YD7 464 aa6.98□□□□□ -1.29
APOB-201ENST00000233242 TMEM54Q969K7 222 aa6.98□□□□□ -1.29
APOB-201ENST00000233242 C20orf144Q9BQM9 153 aa6.98□□□□□ -1.29
APOB-201ENST00000233242 YAE1D1Q9NRH1 226 aa6.98□□□□□ -1.29
APOB-201ENST00000233242 C16orf97H3BN30 126 aa6.97□□□□□ -1.29
APOB-201ENST00000233242 TMPRSS3P57727 454 aa6.97□□□□□ -1.29
APOB-201ENST00000233242 ID3Q02535 119 aa6.97□□□□□ -1.29
APOB-201ENST00000233242 GCSAMLQ5JQS6 135 aa6.97□□□□□ -1.29
APOB-201ENST00000233242 SLC25A48Q6ZT89 311 aaKnown RBP6.97□□□□□ -1.29
APOB-201ENST00000233242 C1QTNF9P0C862 333 aa6.97□□□□□ -1.29
APOB-201ENST00000233242 C3AR1Q16581 482 aa6.97□□□□□ -1.29
APOB-201ENST00000233242 TMEM170BQ5T4T1 132 aa6.97□□□□□ -1.29
APOB-201ENST00000233242 SPRED2Q7Z698 418 aa6.97□□□□□ -1.29
APOB-201ENST00000233242 A0A1W2PPE3 182 aa6.97□□□□□ -1.29
APOB-201ENST00000233242 UBE2L6O14933 153 aa6.97□□□□□ -1.29
APOB-201ENST00000233242 GAGE1Q13065 139 aa6.97□□□□□ -1.29
APOB-201ENST00000233242 ZNF585BQ52M93 769 aa6.97□□□□□ -1.29
APOB-201ENST00000233242 C1orf53Q5VUE5 145 aa6.97□□□□□ -1.29
APOB-201ENST00000233242 SHISA5Q8N114 240 aa6.97□□□□□ -1.29
APOB-201ENST00000233242 GP6Q9HCN6 339 aa6.97□□□□□ -1.29
APOB-201ENST00000233242 J3KRW8 73 aa6.97□□□□□ -1.29
APOB-201ENST00000233242 ZXDCQ2QGD7 858 aaPredicted RBP6.97□□□□□ -1.29
APOB-201ENST00000233242 OTORQ9NRC9 128 aa6.97□□□□□ -1.29
APOB-201ENST00000233242 TFF3Q07654 80 aa6.97□□□□□ -1.29
APOB-201ENST00000233242 EAF1Q96JC9 268 aaPredicted RBP6.97□□□□□ -1.29
APOB-201ENST00000233242 CCL1P22362 96 aa6.97□□□□□ -1.29
APOB-201ENST00000233242 MEIG1Q5JSS6 88 aa6.97□□□□□ -1.29
APOB-201ENST00000233242 TMEM92Q6UXU6 159 aa6.97□□□□□ -1.29
APOB-201ENST00000233242 TMEM144Q7Z5S9 345 aa6.97□□□□□ -1.29
APOB-201ENST00000233242 MGST2Q99735 147 aa6.97□□□□□ -1.29
APOB-201ENST00000233242 HS3ST3B1Q9Y662 390 aa6.97□□□□□ -1.29
APOB-201ENST00000233242 C9JCJ5 164 aa6.97□□□□□ -1.29
APOB-201ENST00000233242 NPIPB3Q92617 1050 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms