RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 RAB25P57735 213 aa16.85■□□□□ 0.29
SCN1B-206ENST00000638536 RND3P61587 244 aa16.85■□□□□ 0.29
SCN1B-206ENST00000638536 RUNX1Q01196 453 aa16.85■□□□□ 0.29
SCN1B-206ENST00000638536 Q8N402 240 aa16.85■□□□□ 0.29
SCN1B-206ENST00000638536 TP53RKQ96S44 253 aa16.85■□□□□ 0.29
SCN1B-206ENST00000638536 SPIN2AQ99865 258 aa16.85■□□□□ 0.29
SCN1B-206ENST00000638536 SPIN2BQ9BPZ2 258 aa16.85■□□□□ 0.29
SCN1B-206ENST00000638536 NSG2Q9Y328 171 aa16.85■□□□□ 0.29
SCN1B-206ENST00000638536 PRB2P02812 416 aaPredicted RBP16.84■□□□□ 0.29
SCN1B-206ENST00000638536 OR9G9P0C7N8 305 aa16.84■□□□□ 0.29
SCN1B-206ENST00000638536 AREGP15514 252 aa16.84■□□□□ 0.29
SCN1B-206ENST00000638536 ZNF45Q02386 682 aa16.84■□□□□ 0.29
SCN1B-206ENST00000638536 OR1N2Q8NGR9 330 aa16.84■□□□□ 0.29
SCN1B-206ENST00000638536 OR4A5Q8NH83 315 aa16.84■□□□□ 0.29
SCN1B-206ENST00000638536 ZNF486Q96H40 463 aaPredicted RBP16.84■□□□□ 0.29
SCN1B-206ENST00000638536 AIFM2Q9BRQ8 373 aa16.84■□□□□ 0.29
SCN1B-206ENST00000638536 RTBDNQ9BSG5 229 aaPredicted RBP16.84■□□□□ 0.29
SCN1B-206ENST00000638536 SLA2Q9H6Q3 261 aa16.84■□□□□ 0.29
SCN1B-206ENST00000638536 NDUFA13Q9P0J0 144 aa16.84■□□□□ 0.29
SCN1B-206ENST00000638536 DISC1C4P0D8 188 aa16.83■□□□□ 0.28
SCN1B-206ENST00000638536 CD40LGP29965 261 aa16.83■□□□□ 0.28
SCN1B-206ENST00000638536 MAS1LP35410 378 aa16.83■□□□□ 0.28
SCN1B-206ENST00000638536 ETV6P41212 452 aa16.83■□□□□ 0.28
SCN1B-206ENST00000638536 KLF9Q13886 244 aaPredicted RBP16.83■□□□□ 0.28
SCN1B-206ENST00000638536 TTC9CQ8N5M4 171 aa16.83■□□□□ 0.28
SCN1B-206ENST00000638536 DBX1A6NMT0 343 aa16.82■□□□□ 0.28
SCN1B-206ENST00000638536 H3BUA1 57 aa16.82■□□□□ 0.28
SCN1B-206ENST00000638536 LGALS1P09382 135 aaKnown RBP16.82■□□□□ 0.28
SCN1B-206ENST00000638536 S100GP29377 79 aa16.82■□□□□ 0.28
SCN1B-206ENST00000638536 OR2B8PP59922 312 aa16.82■□□□□ 0.28
SCN1B-206ENST00000638536 SP6Q3SY56 376 aa16.82■□□□□ 0.28
SCN1B-206ENST00000638536 KPRPQ5T749 579 aaPredicted RBP16.82■□□□□ 0.28
SCN1B-206ENST00000638536 SEC22AQ96IW7 307 aa16.82■□□□□ 0.28
SCN1B-206ENST00000638536 C5orf66Q9H5L9 145 aa16.82■□□□□ 0.28
SCN1B-206ENST00000638536 IGHV4OR15-8A0A075B7B6 117 aa16.81■□□□□ 0.28
SCN1B-206ENST00000638536 A0A087WW49 117 aa16.81■□□□□ 0.28
SCN1B-206ENST00000638536 CTSDP07339 412 aaPredicted RBP16.81■□□□□ 0.28
SCN1B-206ENST00000638536 PTBP1P26599 531 aaKnown RBP eCLIP16.81■□□□□ 0.28
SCN1B-206ENST00000638536 ZFAND1Q8TCF1 268 aa16.81■□□□□ 0.28
SCN1B-206ENST00000638536 SRRQ9GZT4 340 aa16.81■□□□□ 0.28
SCN1B-206ENST00000638536 FAM212BQ9NTI7 297 aaPredicted RBP16.81■□□□□ 0.28
SCN1B-206ENST00000638536 BRI3O95415 125 aa16.81■□□□□ 0.28
SCN1B-206ENST00000638536 REG1AP05451 166 aa16.81■□□□□ 0.28
SCN1B-206ENST00000638536 SLURP1P55000 103 aa16.81■□□□□ 0.28
SCN1B-206ENST00000638536 ERVK-16P61578 105 aa16.81■□□□□ 0.28
SCN1B-206ENST00000638536 ZNF616Q08AN1 781 aa16.81■□□□□ 0.28
SCN1B-206ENST00000638536 OR10W1Q8NGF6 305 aa16.81■□□□□ 0.28
SCN1B-206ENST00000638536 RCC1LQ96I51 464 aaKnown RBP16.81■□□□□ 0.28
SCN1B-206ENST00000638536 MCUBQ9NWR8 336 aa16.81■□□□□ 0.28
SCN1B-206ENST00000638536 GPR132Q9UNW8 380 aa16.81■□□□□ 0.28
SCN1B-206ENST00000638536 C3orf85A0A1B0GTC6 90 aa16.8■□□□□ 0.28
SCN1B-206ENST00000638536 TEX50A0A1B0GTY4 177 aa16.8■□□□□ 0.28
SCN1B-206ENST00000638536 IZUMO4Q1ZYL8 232 aa16.8■□□□□ 0.28
SCN1B-206ENST00000638536 SDHCQ99643 169 aaPredicted RBP16.8■□□□□ 0.28
SCN1B-206ENST00000638536 AKIP1Q9NQ31 210 aa16.8■□□□□ 0.28
SCN1B-206ENST00000638536 SLC2A8Q9NY64 477 aa16.8■□□□□ 0.28
SCN1B-206ENST00000638536 COPZ2Q9P299 210 aa16.8■□□□□ 0.28
SCN1B-206ENST00000638536 TRBV9A0A0B4J1U6 114 aa16.79■□□□□ 0.28
SCN1B-206ENST00000638536 IGLC7A0M8Q6 106 aa16.79■□□□□ 0.28
SCN1B-206ENST00000638536 H0Y980 276 aa16.79■□□□□ 0.28
SCN1B-206ENST00000638536 BAK1Q16611 211 aa16.79■□□□□ 0.28
SCN1B-206ENST00000638536 SPANXN2Q5MJ10 180 aa16.79■□□□□ 0.28
SCN1B-206ENST00000638536 PRRT1Q99946 306 aa16.79■□□□□ 0.28
SCN1B-206ENST00000638536 TGP01266 2768 aa16.78■□□□□ 0.28
SCN1B-206ENST00000638536 TRBV12-3P01733 135 aa16.78■□□□□ 0.28
SCN1B-206ENST00000638536 HOXD3P31249 432 aaPredicted RBP16.78■□□□□ 0.28
SCN1B-206ENST00000638536 RHOGP84095 191 aa16.78■□□□□ 0.28
SCN1B-206ENST00000638536 TOMM5Q8N4H5 51 aa16.78■□□□□ 0.28
SCN1B-206ENST00000638536 DCUN1D4Q92564 292 aa16.78■□□□□ 0.28
SCN1B-206ENST00000638536 FANCD2OSQ96PS1 177 aa16.78■□□□□ 0.28
SCN1B-206ENST00000638536 COMMD5Q9GZQ3 224 aa16.78■□□□□ 0.28
SCN1B-206ENST00000638536 C13orf42A0A1B0GVH6 325 aa16.78■□□□□ 0.28
SCN1B-206ENST00000638536 ANKRD34BA5PLL1 514 aa16.78■□□□□ 0.28
SCN1B-206ENST00000638536 NPIPB5A8MRT5 1133 aa16.78■□□□□ 0.28
SCN1B-206ENST00000638536 LINC01619G3V211 115 aa16.78■□□□□ 0.28
SCN1B-206ENST00000638536 IGKV1-5P01602 117 aa16.78■□□□□ 0.28
SCN1B-206ENST00000638536 SERPINE2P07093 398 aa16.78■□□□□ 0.28
SCN1B-206ENST00000638536 CRYGCP07315 174 aa16.78■□□□□ 0.28
SCN1B-206ENST00000638536 CTRB1P17538 263 aa16.78■□□□□ 0.28
SCN1B-206ENST00000638536 PSMB6P28072 239 aa16.78■□□□□ 0.28
SCN1B-206ENST00000638536 CTRB2Q6GPI1 263 aa16.78■□□□□ 0.28
SCN1B-206ENST00000638536 CADM3Q8N126 398 aa16.78■□□□□ 0.28
SCN1B-206ENST00000638536 DLX4Q92988 240 aaPredicted RBP16.78■□□□□ 0.28
SCN1B-206ENST00000638536 A6NHS1 94 aa16.77■□□□□ 0.27
SCN1B-206ENST00000638536 WIPF1O43516 503 aa16.77■□□□□ 0.27
SCN1B-206ENST00000638536 OR2J3O76001 311 aa16.77■□□□□ 0.27
SCN1B-206ENST00000638536 HSPB1P04792 205 aaKnown RBP16.77■□□□□ 0.27
SCN1B-206ENST00000638536 KRTAP10-11P60412 298 aa16.77■□□□□ 0.27
SCN1B-206ENST00000638536 SURF2Q15527 256 aaPredicted RBP16.77■□□□□ 0.27
SCN1B-206ENST00000638536 CCDC71LQ8N9Z2 235 aa16.77■□□□□ 0.27
SCN1B-206ENST00000638536 DPF1Q92782 380 aa16.77■□□□□ 0.27
SCN1B-206ENST00000638536 TMEM230Q96A57 120 aa16.77■□□□□ 0.27
SCN1B-206ENST00000638536 C14orf166Q9Y224 244 aaKnown RBP16.77■□□□□ 0.27
SCN1B-206ENST00000638536 ZNF257Q9Y2Q1 563 aa16.77■□□□□ 0.27
SCN1B-206ENST00000638536 DMRT1Q9Y5R6 373 aa16.77■□□□□ 0.27
SCN1B-206ENST00000638536 A0A0G2JLM5 398 aa16.76■□□□□ 0.27
SCN1B-206ENST00000638536 FGF2P09038 288 aa16.76■□□□□ 0.27
SCN1B-206ENST00000638536 OR5AC1P0C628 307 aa16.76■□□□□ 0.27
SCN1B-206ENST00000638536 OR8U8P0C7N1 319 aa16.76■□□□□ 0.27
SCN1B-206ENST00000638536 ECI1P42126 302 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms