RNA–Protein interactions for RNA: ENST00000597816.5

LTBP4-218, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 3

Gene LTBP4, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-218ENST00000597816 ECI1P42126 302 aa12.39□□□□□ -0.43
LTBP4-218ENST00000597816 ERVK-16P61578 105 aa12.39□□□□□ -0.43
LTBP4-218ENST00000597816 MRPS10P82664 201 aaKnown RBP12.39□□□□□ -0.43
LTBP4-218ENST00000597816 ZNF45Q02386 682 aa12.39□□□□□ -0.43
LTBP4-218ENST00000597816 PHLDA2Q53GA4 152 aa12.39□□□□□ -0.43
LTBP4-218ENST00000597816 RNASE10Q5GAN6 216 aaKnown RBP12.39□□□□□ -0.43
LTBP4-218ENST00000597816 ACSM6Q6P461 480 aa12.39□□□□□ -0.43
LTBP4-218ENST00000597816 FAM223AQ8IWN6 122 aa12.39□□□□□ -0.43
LTBP4-218ENST00000597816 SLC38A6Q8IZM9 456 aa12.39□□□□□ -0.43
LTBP4-218ENST00000597816 NECAP1Q8NC96 275 aa12.39□□□□□ -0.43
LTBP4-218ENST00000597816 ISOC1Q96CN7 298 aa12.39□□□□□ -0.43
LTBP4-218ENST00000597816 DIRAS2Q96HU8 199 aa12.39□□□□□ -0.43
LTBP4-218ENST00000597816 FAM212BQ9NTI7 297 aaPredicted RBP12.39□□□□□ -0.43
LTBP4-218ENST00000597816 TMEM140Q9NV12 185 aa12.39□□□□□ -0.43
LTBP4-218ENST00000597816 A0A1B0GW64 132 aa12.38□□□□□ -0.43
LTBP4-218ENST00000597816 H3BMQ9 156 aa12.38□□□□□ -0.43
LTBP4-218ENST00000597816 RBMXL2O75526 392 aaKnown RBP12.38□□□□□ -0.43
LTBP4-218ENST00000597816 DHFRP00374 187 aa12.38□□□□□ -0.43
LTBP4-218ENST00000597816 CRYGCP07315 174 aa12.38□□□□□ -0.43
LTBP4-218ENST00000597816 MYOD1P15172 320 aa12.38□□□□□ -0.43
LTBP4-218ENST00000597816 RPA2P15927 270 aa12.38□□□□□ -0.43
LTBP4-218ENST00000597816 PSMB6P28072 239 aa12.38□□□□□ -0.43
LTBP4-218ENST00000597816 DEFA5Q01523 94 aa12.38□□□□□ -0.43
LTBP4-218ENST00000597816 SSBP1Q04837 148 aaKnown RBP12.38□□□□□ -0.43
LTBP4-218ENST00000597816 DCTN2Q13561 401 aaKnown RBP12.38□□□□□ -0.43
LTBP4-218ENST00000597816 ZNF585BQ52M93 769 aa12.38□□□□□ -0.43
LTBP4-218ENST00000597816 CADM3Q8N126 398 aa12.38□□□□□ -0.43
LTBP4-218ENST00000597816 ARRDC1Q8N5I2 433 aa12.38□□□□□ -0.43
LTBP4-218ENST00000597816 TMEM229BQ8NBD8 167 aa12.38□□□□□ -0.43
LTBP4-218ENST00000597816 ELOVL1Q9BW60 279 aa12.38□□□□□ -0.43
LTBP4-218ENST00000597816 COMMD5Q9GZQ3 224 aa12.38□□□□□ -0.43
LTBP4-218ENST00000597816 MARCH11A6NNE9 402 aa12.37□□□□□ -0.43
LTBP4-218ENST00000597816 KRASP01116 189 aa12.37□□□□□ -0.43
LTBP4-218ENST00000597816 TAS2R19P59542 299 aa12.37□□□□□ -0.43
LTBP4-218ENST00000597816 OR2B8PP59922 312 aa12.37□□□□□ -0.43
LTBP4-218ENST00000597816 KLF5Q13887 457 aaPredicted RBP12.37□□□□□ -0.43
LTBP4-218ENST00000597816 TATDN3Q17R31 274 aa12.37□□□□□ -0.43
LTBP4-218ENST00000597816 TBC1D26Q86UD7 250 aa12.37□□□□□ -0.43
LTBP4-218ENST00000597816 OR4C12Q96R67 309 aa12.37□□□□□ -0.43
LTBP4-218ENST00000597816 CEPT1Q9Y6K0 416 aa12.37□□□□□ -0.43
LTBP4-218ENST00000597816 CGB1A6NKQ9 187 aa12.36□□□□□ -0.43
LTBP4-218ENST00000597816 CTDSPLO15194 276 aa12.36□□□□□ -0.43
LTBP4-218ENST00000597816 OR2J3O76001 311 aa12.36□□□□□ -0.43
LTBP4-218ENST00000597816 RAB3DO95716 219 aa12.36□□□□□ -0.43
LTBP4-218ENST00000597816 CD74P04233 296 aa12.36□□□□□ -0.43
LTBP4-218ENST00000597816 PGAM2P15259 253 aa12.36□□□□□ -0.43
LTBP4-218ENST00000597816 AREGP15514 252 aa12.36□□□□□ -0.43
LTBP4-218ENST00000597816 HIST1H1BP16401 226 aaKnown RBP12.36□□□□□ -0.43
LTBP4-218ENST00000597816 CTRB1P17538 263 aa12.36□□□□□ -0.43
LTBP4-218ENST00000597816 IL18Q14116 193 aa12.36□□□□□ -0.43
LTBP4-218ENST00000597816 KLK9Q2XQG4 91 aa12.36□□□□□ -0.43
LTBP4-218ENST00000597816 FAM209BQ5JX69 171 aa12.36□□□□□ -0.43
LTBP4-218ENST00000597816 CTRB2Q6GPI1 263 aa12.36□□□□□ -0.43
LTBP4-218ENST00000597816 STEAP1BQ6NZ63 245 aa12.36□□□□□ -0.43
LTBP4-218ENST00000597816 LHFPL1Q86WI0 220 aa12.36□□□□□ -0.43
LTBP4-218ENST00000597816 TERB2Q8NHR7 220 aa12.36□□□□□ -0.43
LTBP4-218ENST00000597816 ZNF486Q96H40 463 aaPredicted RBP12.36□□□□□ -0.43
LTBP4-218ENST00000597816 SRSF8Q9BRL6 282 aaKnown RBP12.36□□□□□ -0.43
LTBP4-218ENST00000597816 SLIRPQ9GZT3 109 aaKnown RBP12.36□□□□□ -0.43
LTBP4-218ENST00000597816 C6orf62Q9GZU0 229 aaPredicted RBP12.36□□□□□ -0.43
LTBP4-218ENST00000597816 FBXL7Q9UJT9 491 aa12.36□□□□□ -0.43
LTBP4-218ENST00000597816 KLK9Q9UKQ9 250 aa12.36□□□□□ -0.43
LTBP4-218ENST00000597816 ZNF256Q9Y2P7 627 aaPredicted RBP12.36□□□□□ -0.43
LTBP4-218ENST00000597816 TEX50A0A1B0GTY4 177 aa12.35□□□□□ -0.43
LTBP4-218ENST00000597816 SNAPC5O75971 98 aa12.35□□□□□ -0.43
LTBP4-218ENST00000597816 TRBV12-3P01733 135 aa12.35□□□□□ -0.43
LTBP4-218ENST00000597816 TRAPPC2P0DI81 140 aa12.35□□□□□ -0.43
LTBP4-218ENST00000597816 TRAPPC2BP0DI82 140 aa12.35□□□□□ -0.43
LTBP4-218ENST00000597816 DEFA4P12838 97 aa12.35□□□□□ -0.43
LTBP4-218ENST00000597816 G6PCP35575 357 aa12.35□□□□□ -0.43
LTBP4-218ENST00000597816 EXOSC2Q13868 293 aaKnown RBP12.35□□□□□ -0.43
LTBP4-218ENST00000597816 RPEL1Q2QD12 228 aa12.35□□□□□ -0.43
LTBP4-218ENST00000597816 C15orf32Q32M92 178 aa12.35□□□□□ -0.43
LTBP4-218ENST00000597816 THOC7Q6I9Y2 204 aaKnown RBP12.35□□□□□ -0.43
LTBP4-218ENST00000597816 OR1L8Q8NGR8 309 aa12.35□□□□□ -0.43
LTBP4-218ENST00000597816 ZFAND1Q8TCF1 268 aa12.35□□□□□ -0.43
LTBP4-218ENST00000597816 SMIM4Q8WVI0 70 aa12.35□□□□□ -0.43
LTBP4-218ENST00000597816 FANCD2OSQ96PS1 177 aa12.35□□□□□ -0.43
LTBP4-218ENST00000597816 PRR25Q96S07 402 aa12.35□□□□□ -0.43
LTBP4-218ENST00000597816 QTRT1Q9BXR0 403 aaKnown RBP12.35□□□□□ -0.43
LTBP4-218ENST00000597816 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.34□□□□□ -0.43
LTBP4-218ENST00000597816 NDUFB8O95169 186 aa12.34□□□□□ -0.43
LTBP4-218ENST00000597816 REG1AP05451 166 aa12.34□□□□□ -0.43
LTBP4-218ENST00000597816 PTBP1P26599 531 aaKnown RBP eCLIP12.34□□□□□ -0.439e-7■■■□□ 15.4
LTBP4-218ENST00000597816 SYNJ2BPP57105 145 aa12.34□□□□□ -0.43
LTBP4-218ENST00000597816 RND3P61587 244 aa12.34□□□□□ -0.43
LTBP4-218ENST00000597816 C19orf35Q6ZS72 473 aa12.34□□□□□ -0.43
LTBP4-218ENST00000597816 OR4D10Q8NGI6 311 aa12.34□□□□□ -0.43
LTBP4-218ENST00000597816 OR6Q1Q8NGQ2 317 aa12.34□□□□□ -0.43
LTBP4-218ENST00000597816 MCFD2Q8NI22 146 aa12.34□□□□□ -0.43
LTBP4-218ENST00000597816 TSC22D3Q99576 134 aa12.34□□□□□ -0.43
LTBP4-218ENST00000597816 NXF2Q9GZY0 626 aaKnown RBP12.34□□□□□ -0.43
LTBP4-218ENST00000597816 FKBP11Q9NYL4 201 aa12.34□□□□□ -0.43
LTBP4-218ENST00000597816 RSL24D1Q9UHA3 163 aaKnown RBP12.34□□□□□ -0.43
LTBP4-218ENST00000597816 IGLC7A0M8Q6 106 aa12.33□□□□□ -0.44
LTBP4-218ENST00000597816 CCDC160A6NGH7 325 aa12.33□□□□□ -0.44
LTBP4-218ENST00000597816 LY86O95711 162 aa12.33□□□□□ -0.44
LTBP4-218ENST00000597816 SERPINE2P07093 398 aa12.33□□□□□ -0.44
LTBP4-218ENST00000597816 TNFSF8P32971 234 aa12.33□□□□□ -0.44
LTBP4-218ENST00000597816 PIGPP57054 158 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms