RNA–Protein interactions for RNA: ENST00000587411.5

RANBP3-209, Transcript of RAN binding protein 3, humanhuman

TSL 1 (best)

Gene RANBP3, Length 2,669 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-209ENST00000587411 HELTA6NFD8 242 aa13.63□□□□□ -0.23
RANBP3-209ENST00000587411 HLA-DQA1P01909 254 aa13.63□□□□□ -0.23
RANBP3-209ENST00000587411 IGHV3-43DP0DP04 118 aa13.63□□□□□ -0.23
RANBP3-209ENST00000587411 SPATA31B1PQ5VZV4 182 aa13.63□□□□□ -0.23
RANBP3-209ENST00000587411 Q6ZN92 141 aa13.63□□□□□ -0.23
RANBP3-209ENST00000587411 OR13A1Q8NGR1 328 aa13.63□□□□□ -0.23
RANBP3-209ENST00000587411 C1orf159Q96HA4 380 aa13.63□□□□□ -0.23
RANBP3-209ENST00000587411 TTTY12Q9BZ98 90 aa13.63□□□□□ -0.23
RANBP3-209ENST00000587411 C12orf49Q9H741 205 aa13.63□□□□□ -0.23
RANBP3-209ENST00000587411 TMEM167BQ9NRX6 74 aa13.63□□□□□ -0.23
RANBP3-209ENST00000587411 FOXJ2Q9P0K8 574 aa13.63□□□□□ -0.23
RANBP3-209ENST00000587411 C20orf202A1L168 122 aa13.62□□□□□ -0.23
RANBP3-209ENST00000587411 WNT9BO14905 357 aa13.62□□□□□ -0.23
RANBP3-209ENST00000587411 AMY1AP04745 511 aa13.62□□□□□ -0.23
RANBP3-209ENST00000587411 SP1P08047 785 aa13.62□□□□□ -0.23
RANBP3-209ENST00000587411 ALKBH6Q3KRA9 238 aa13.62□□□□□ -0.23
RANBP3-209ENST00000587411 ACP7Q6ZNF0 438 aa13.62□□□□□ -0.23
RANBP3-209ENST00000587411 OR4P4Q8NGL7 312 aa13.62□□□□□ -0.23
RANBP3-209ENST00000587411 SLC25A40Q8TBP6 338 aa13.62□□□□□ -0.23
RANBP3-209ENST00000587411 IL19Q9UHD0 177 aa13.62□□□□□ -0.23
RANBP3-209ENST00000587411 PILRBQ9UKJ0 227 aa13.62□□□□□ -0.23
RANBP3-209ENST00000587411 DOCK11Q5JSL3 2073 aa13.62□□□□□ -0.23
RANBP3-209ENST00000587411 PMCHP20382 165 aa13.62□□□□□ -0.23
RANBP3-209ENST00000587411 RELBQ01201 579 aa13.62□□□□□ -0.23
RANBP3-209ENST00000587411 TIGITQ495A1 244 aa13.62□□□□□ -0.23
RANBP3-209ENST00000587411 Q6ZR03 302 aa13.62□□□□□ -0.23
RANBP3-209ENST00000587411 ABHD12Q8N2K0 398 aa13.62□□□□□ -0.23
RANBP3-209ENST00000587411 STPG4Q8N801 248 aa13.62□□□□□ -0.23
RANBP3-209ENST00000587411 CORO2AQ92828 525 aa13.62□□□□□ -0.23
RANBP3-209ENST00000587411 DPRXA6NFQ7 191 aa13.61□□□□□ -0.23
RANBP3-209ENST00000587411 DEFB108AA8MXU0 73 aa13.61□□□□□ -0.23
RANBP3-209ENST00000587411 ZNF83P51522 516 aa13.61□□□□□ -0.23
RANBP3-209ENST00000587411 MED12LQ86YW9 2145 aa13.61□□□□□ -0.23
RANBP3-209ENST00000587411 KMT2EQ8IZD2 1858 aa13.61□□□□□ -0.23
RANBP3-209ENST00000587411 CT55Q8WUE5 264 aa13.61□□□□□ -0.23
RANBP3-209ENST00000587411 CDX2Q99626 313 aaPredicted RBP13.61□□□□□ -0.23
RANBP3-209ENST00000587411 OBP2BQ9NPH6 170 aa13.61□□□□□ -0.23
RANBP3-209ENST00000587411 TCF19Q9Y242 345 aa13.61□□□□□ -0.23
RANBP3-209ENST00000587411 C15orf65H3BRN8 121 aa13.61□□□□□ -0.23
RANBP3-209ENST00000587411 ISLRO14498 428 aa13.61□□□□□ -0.23
RANBP3-209ENST00000587411 FOXH1O75593 365 aa13.61□□□□□ -0.23
RANBP3-209ENST00000587411 NDUFB8O95169 186 aa13.61□□□□□ -0.23
RANBP3-209ENST00000587411 ABHD17BQ5VST6 288 aa13.61□□□□□ -0.23
RANBP3-209ENST00000587411 TMEM251Q8N6I4 163 aa13.61□□□□□ -0.23
RANBP3-209ENST00000587411 RFESDQ8TAC1 157 aa13.61□□□□□ -0.23
RANBP3-209ENST00000587411 GTF3C1Q12789 2109 aa13.61□□□□□ -0.23
RANBP3-209ENST00000587411 CGAP01215 116 aa13.6□□□□□ -0.23
RANBP3-209ENST00000587411 C3orf79P0CE67 100 aa13.6□□□□□ -0.23
RANBP3-209ENST00000587411 KIR2DS2P43631 304 aa13.6□□□□□ -0.23
RANBP3-209ENST00000587411 PRR20EP86478 221 aa13.6□□□□□ -0.23
RANBP3-209ENST00000587411 PRR20CP86479 221 aa13.6□□□□□ -0.23
RANBP3-209ENST00000587411 PRR20DP86480 221 aa13.6□□□□□ -0.23
RANBP3-209ENST00000587411 PRR20BP86481 221 aa13.6□□□□□ -0.23
RANBP3-209ENST00000587411 PRR20AP86496 221 aa13.6□□□□□ -0.23
RANBP3-209ENST00000587411 C6orf15Q6UXA7 325 aaPredicted RBP13.6□□□□□ -0.23
RANBP3-209ENST00000587411 C11orf53Q8IXP5 236 aa13.6□□□□□ -0.23
RANBP3-209ENST00000587411 Q8TCH9 128 aa13.6□□□□□ -0.23
RANBP3-209ENST00000587411 RCHY1Q96PM5 261 aa13.6□□□□□ -0.23
RANBP3-209ENST00000587411 FNDC10F2Z333 226 aa13.6□□□□□ -0.23
RANBP3-209ENST00000587411 CELA3BP08861 270 aa13.6□□□□□ -0.23
RANBP3-209ENST00000587411 PQLC2Q6ZP29 291 aa13.6□□□□□ -0.23
RANBP3-209ENST00000587411 TIPARPQ7Z3E1 657 aaKnown RBP13.6□□□□□ -0.23
RANBP3-209ENST00000587411 HES7Q9BYE0 225 aa13.6□□□□□ -0.23
RANBP3-209ENST00000587411 CXXC4Q9H2H0 198 aa13.6□□□□□ -0.23
RANBP3-209ENST00000587411 ABI3Q9P2A4 366 aa13.6□□□□□ -0.23
RANBP3-209ENST00000587411 M0R1X1 148 aa13.59□□□□□ -0.23
RANBP3-209ENST00000587411 BMPR1BO00238 502 aa13.59□□□□□ -0.23
RANBP3-209ENST00000587411 PROP1O75360 226 aa13.59□□□□□ -0.23
RANBP3-209ENST00000587411 SRIP30626 198 aa13.59□□□□□ -0.23
RANBP3-209ENST00000587411 PMCHL1Q16048 86 aa13.59□□□□□ -0.23
RANBP3-209ENST00000587411 ZNF826PQ6ZT77 177 aa13.59□□□□□ -0.23
RANBP3-209ENST00000587411 NIT1Q86X76 327 aa13.59□□□□□ -0.23
RANBP3-209ENST00000587411 BORCS7Q96B45 105 aa13.59□□□□□ -0.23
RANBP3-209ENST00000587411 TMEM140Q9NV12 185 aa13.59□□□□□ -0.23
RANBP3-209ENST00000587411 MRPS16Q9Y3D3 137 aaKnown RBP13.59□□□□□ -0.23
RANBP3-209ENST00000587411 IGFBP4P22692 258 aa13.59□□□□□ -0.23
RANBP3-209ENST00000587411 NPY1RP25929 384 aa13.59□□□□□ -0.23
RANBP3-209ENST00000587411 C3AR1Q16581 482 aa13.59□□□□□ -0.23
RANBP3-209ENST00000587411 SMIM21Q3B7S5 101 aa13.59□□□□□ -0.23
RANBP3-209ENST00000587411 PMS2CLQ68D20 193 aa13.59□□□□□ -0.23
RANBP3-209ENST00000587411 MRPL27Q9P0M9 148 aaKnown RBP13.59□□□□□ -0.23
RANBP3-209ENST00000587411 JPT1Q9UK76 154 aa13.59□□□□□ -0.23
RANBP3-209ENST00000587411 USF3Q68DE3 2245 aa13.59□□□□□ -0.23
RANBP3-209ENST00000587411 YLPM1P49750 1951 aaKnown RBP13.59□□□□□ -0.23
RANBP3-209ENST00000587411 SMIM27A0A1W2PRY6 76 aa13.58□□□□□ -0.23
RANBP3-209ENST00000587411 CRYBB3P26998 211 aa13.58□□□□□ -0.23
RANBP3-209ENST00000587411 KLF3P57682 345 aaPredicted RBP13.58□□□□□ -0.23
RANBP3-209ENST00000587411 KIAA1644Q3SXP7 199 aa13.58□□□□□ -0.23
RANBP3-209ENST00000587411 VASH2Q86V25 355 aa13.58□□□□□ -0.23
RANBP3-209ENST00000587411 CXorf67Q86X51 503 aaPredicted RBP13.58□□□□□ -0.23
RANBP3-209ENST00000587411 DOLPP1Q86YN1 238 aa13.58□□□□□ -0.23
RANBP3-209ENST00000587411 TPRX1Q8N7U7 411 aa13.58□□□□□ -0.23
RANBP3-209ENST00000587411 SLC24A4Q8NFF2 622 aa13.58□□□□□ -0.23
RANBP3-209ENST00000587411 OR5B3Q8NH48 314 aa13.58□□□□□ -0.23
RANBP3-209ENST00000587411 S1PR3Q99500 378 aa13.58□□□□□ -0.23
RANBP3-209ENST00000587411 RNASE7Q9H1E1 156 aaKnown RBP13.58□□□□□ -0.23
RANBP3-209ENST00000587411 CFIP05156 583 aa13.58□□□□□ -0.24
RANBP3-209ENST00000587411 PTTG1IPP53801 180 aa13.58□□□□□ -0.24
RANBP3-209ENST00000587411 PSG5Q15238 335 aa13.58□□□□□ -0.24
RANBP3-209ENST00000587411 LEMD1Q68G75 181 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms