RNA–Protein interactions for RNA: ENST00000582331.2

CCDC47-205, Transcript of coiled-coil domain containing 47, humanhuman

TSL 3

Gene CCDC47, Length 693 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-205ENST00000582331 OR4K15Q8NH41 348 aa5.73□□□□□ -1.49
CCDC47-205ENST00000582331 OR1L1Q8NH94 360 aa5.73□□□□□ -1.49
CCDC47-205ENST00000582331 KCNG3Q8TAE7 436 aa5.73□□□□□ -1.49
CCDC47-205ENST00000582331 GIMAP1Q8WWP7 306 aa5.73□□□□□ -1.49
CCDC47-205ENST00000582331 CLCC1Q96S66 551 aa5.73□□□□□ -1.49
CCDC47-205ENST00000582331 NICN1Q9BSH3 213 aa5.73□□□□□ -1.49
CCDC47-205ENST00000582331 ABHD14AQ9BUJ0 271 aa5.73□□□□□ -1.49
CCDC47-205ENST00000582331 WFDC10AQ9H1F0 79 aa5.73□□□□□ -1.49
CCDC47-205ENST00000582331 PEMTQ9UBM1 199 aa5.73□□□□□ -1.49
CCDC47-205ENST00000582331 PEF1Q9UBV8 284 aaKnown RBP5.73□□□□□ -1.49
CCDC47-205ENST00000582331 ANAPC10Q9UM13 185 aa5.73□□□□□ -1.49
CCDC47-205ENST00000582331 VPS13DQ5THJ4 4388 aa5.73□□□□□ -1.49
CCDC47-205ENST00000582331 TMEM235A6NFC5 223 aa5.72□□□□□ -1.49
CCDC47-205ENST00000582331 SNRPGP15A8MWD9 76 aa5.72□□□□□ -1.49
CCDC47-205ENST00000582331 MCRIP1C9JLW8 97 aa5.72□□□□□ -1.49
CCDC47-205ENST00000582331 SMLR1H3BR10 107 aa5.72□□□□□ -1.49
CCDC47-205ENST00000582331 H3BUA1 57 aa5.72□□□□□ -1.49
CCDC47-205ENST00000582331 RGS13O14921 159 aa5.72□□□□□ -1.49
CCDC47-205ENST00000582331 SOCS1O15524 211 aa5.72□□□□□ -1.49
CCDC47-205ENST00000582331 OR2A4O95047 310 aa5.72□□□□□ -1.49
CCDC47-205ENST00000582331 RAB3DO95716 219 aa5.72□□□□□ -1.49
CCDC47-205ENST00000582331 MED14OSP0DP75 135 aa5.72□□□□□ -1.49
CCDC47-205ENST00000582331 NAT1P18440 290 aa5.72□□□□□ -1.49
CCDC47-205ENST00000582331 CXCL3P19876 107 aa5.72□□□□□ -1.49
CCDC47-205ENST00000582331 ANXA7P20073 488 aaKnown RBP5.72□□□□□ -1.49
CCDC47-205ENST00000582331 AADACP22760 399 aa5.72□□□□□ -1.49
CCDC47-205ENST00000582331 RCVRNP35243 200 aa5.72□□□□□ -1.49
CCDC47-205ENST00000582331 OR3A3P47888 321 aa5.72□□□□□ -1.49
CCDC47-205ENST00000582331 TAS2R19P59542 299 aa5.72□□□□□ -1.49
CCDC47-205ENST00000582331 RPS27AP62979 156 aaKnown RBP5.72□□□□□ -1.49
CCDC47-205ENST00000582331 EWSR1Q01844 656 aaKnown RBP eCLIP5.72□□□□□ -1.49
CCDC47-205ENST00000582331 TNFRSF9Q07011 255 aa5.72□□□□□ -1.49
CCDC47-205ENST00000582331 GUCA2BQ16661 112 aa5.72□□□□□ -1.49
CCDC47-205ENST00000582331 RPEL1Q2QD12 228 aa5.72□□□□□ -1.49
CCDC47-205ENST00000582331 PLAC9Q5JTB6 97 aa5.72□□□□□ -1.49
CCDC47-205ENST00000582331 AWAT2Q6E213 333 aa5.72□□□□□ -1.49
CCDC47-205ENST00000582331 LAMTOR1Q6IAA8 161 aa5.72□□□□□ -1.49
CCDC47-205ENST00000582331 TRAT1Q6PIZ9 186 aa5.72□□□□□ -1.49
CCDC47-205ENST00000582331 OR52L2PQ8NGH6 319 aa5.72□□□□□ -1.49
CCDC47-205ENST00000582331 OR51S1Q8NGJ8 323 aa5.72□□□□□ -1.49
CCDC47-205ENST00000582331 ZFAND1Q8TCF1 268 aa5.72□□□□□ -1.49
CCDC47-205ENST00000582331 CYYR1Q96J86 154 aa5.72□□□□□ -1.49
CCDC47-205ENST00000582331 SEC22CQ9BRL7 303 aa5.72□□□□□ -1.49
CCDC47-205ENST00000582331 GGTLC1Q9BX51 225 aa5.72□□□□□ -1.49
CCDC47-205ENST00000582331 SELENOIQ9C0D9 397 aa5.72□□□□□ -1.49
CCDC47-205ENST00000582331 TINAGL1Q9GZM7 467 aaPredicted RBP5.72□□□□□ -1.49
CCDC47-205ENST00000582331 METTL9Q9H1A3 318 aa5.72□□□□□ -1.49
CCDC47-205ENST00000582331 BANF2Q9H503 90 aa5.72□□□□□ -1.49
CCDC47-205ENST00000582331 TAF9BQ9HBM6 251 aa5.72□□□□□ -1.49
CCDC47-205ENST00000582331 RCC2Q9P258 522 aaKnown RBP5.72□□□□□ -1.49
CCDC47-205ENST00000582331 METTL1Q9UBP6 276 aaKnown RBP5.72□□□□□ -1.49
CCDC47-205ENST00000582331 GHRLQ9UBU3 117 aa5.72□□□□□ -1.49
CCDC47-205ENST00000582331 PAIP2BQ9ULR5 123 aaKnown RBP5.72□□□□□ -1.49
CCDC47-205ENST00000582331 KCNK7Q9Y2U2 307 aa5.72□□□□□ -1.49
CCDC47-205ENST00000582331 LOC102724200A0A096LPH7 203 aaPredicted RBP5.71□□□□□ -1.5
CCDC47-205ENST00000582331 KRTAP4-8A0A0G2JLE6 195 aa5.71□□□□□ -1.5
CCDC47-205ENST00000582331 H7C2Y5 167 aa5.71□□□□□ -1.5
CCDC47-205ENST00000582331 M0QYG6 137 aa5.71□□□□□ -1.5
CCDC47-205ENST00000582331 MFNGO00587 321 aa5.71□□□□□ -1.5
CCDC47-205ENST00000582331 FABP7O15540 132 aa5.71□□□□□ -1.5
CCDC47-205ENST00000582331 YPEL1O60688 119 aa5.71□□□□□ -1.5
CCDC47-205ENST00000582331 CA2P00918 260 aa5.71□□□□□ -1.5
CCDC47-205ENST00000582331 TRBV12-3P01733 135 aa5.71□□□□□ -1.5
CCDC47-205ENST00000582331 FCER2P06734 321 aa5.71□□□□□ -1.5
CCDC47-205ENST00000582331 ANXA3P12429 323 aa5.71□□□□□ -1.5
CCDC47-205ENST00000582331 HIST1H1DP16402 221 aaKnown RBP5.71□□□□□ -1.5
CCDC47-205ENST00000582331 GNB3P16520 340 aa5.71□□□□□ -1.5
CCDC47-205ENST00000582331 RCC1P18754 421 aaPredicted RBP5.71□□□□□ -1.5
CCDC47-205ENST00000582331 SERPINA2P20848 420 aa5.71□□□□□ -1.5
CCDC47-205ENST00000582331 MC5RP33032 325 aa5.71□□□□□ -1.5
CCDC47-205ENST00000582331 PPP1CCP36873 323 aaKnown RBP5.71□□□□□ -1.5
CCDC47-205ENST00000582331 GNMTQ14749 295 aa5.71□□□□□ -1.5
CCDC47-205ENST00000582331 CDK10Q15131 360 aa5.71□□□□□ -1.5
CCDC47-205ENST00000582331 RBMS2Q15434 407 aaKnown RBP5.71□□□□□ -1.5
CCDC47-205ENST00000582331 DEFB114Q30KQ6 69 aa5.71□□□□□ -1.5
CCDC47-205ENST00000582331 ZNF343Q6P1L6 599 aa5.71□□□□□ -1.5
CCDC47-205ENST00000582331 LYG2Q86SG7 212 aa5.71□□□□□ -1.5
CCDC47-205ENST00000582331 BVESQ8NE79 360 aa5.71□□□□□ -1.5
CCDC47-205ENST00000582331 OR56B1Q8NGI3 324 aa5.71□□□□□ -1.5
CCDC47-205ENST00000582331 OR13C8Q8NGS7 320 aa5.71□□□□□ -1.5
CCDC47-205ENST00000582331 DYNLRB2Q8TF09 96 aa5.71□□□□□ -1.5
CCDC47-205ENST00000582331 NUDCD2Q8WVJ2 157 aa5.71□□□□□ -1.5
CCDC47-205ENST00000582331 SNAPC3Q92966 411 aa5.71□□□□□ -1.5
CCDC47-205ENST00000582331 YPEL2Q96QA6 119 aa5.71□□□□□ -1.5
CCDC47-205ENST00000582331 S100A13Q99584 98 aa5.71□□□□□ -1.5
CCDC47-205ENST00000582331 GINS4Q9BRT9 223 aa5.71□□□□□ -1.5
CCDC47-205ENST00000582331 TM2D1Q9BX74 207 aa5.71□□□□□ -1.5
CCDC47-205ENST00000582331 TMEM59Q9BXS4 323 aa5.71□□□□□ -1.5
CCDC47-205ENST00000582331 SPACA1Q9HBV2 294 aa5.71□□□□□ -1.5
CCDC47-205ENST00000582331 IL36GQ9NZH8 169 aa5.71□□□□□ -1.5
CCDC47-205ENST00000582331 KCNIP1Q9NZI2 227 aa5.71□□□□□ -1.5
CCDC47-205ENST00000582331 PIPOXQ9P0Z9 390 aa5.71□□□□□ -1.5
CCDC47-205ENST00000582331 JPT1Q9UK76 154 aa5.71□□□□□ -1.5
CCDC47-205ENST00000582331 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.71□□□□□ -1.5
CCDC47-205ENST00000582331 SAA2-SAA4A0A096LPE2 208 aa5.7□□□□□ -1.5
CCDC47-205ENST00000582331 OR5H14A6NHG9 310 aa5.7□□□□□ -1.5
CCDC47-205ENST00000582331 G3V3Q6 166 aa5.7□□□□□ -1.5
CCDC47-205ENST00000582331 SSNA1O43805 119 aa5.7□□□□□ -1.5
CCDC47-205ENST00000582331 ZNF780AO75290 641 aaPredicted RBP5.7□□□□□ -1.5
CCDC47-205ENST00000582331 ATP6V1G1O75348 118 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms