RNA–Protein interactions for RNA: ENST00000581241.5

CSNK1D-217, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 6,094 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-217ENST00000581241 NPPCP23582 126 aa12.34□□□□□ -0.43
CSNK1D-217ENST00000581241 SPRED2Q7Z698 418 aa12.34□□□□□ -0.43
CSNK1D-217ENST00000581241 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.34□□□□□ -0.43
CSNK1D-217ENST00000581241 BEND2Q8NDZ0 799 aa12.34□□□□□ -0.43
CSNK1D-217ENST00000581241 SP7Q8TDD2 431 aaPredicted RBP12.34□□□□□ -0.43
CSNK1D-217ENST00000581241 C18orf15Q96N68 181 aa12.34□□□□□ -0.43
CSNK1D-217ENST00000581241 FOXC2Q99958 501 aa12.34□□□□□ -0.43
CSNK1D-217ENST00000581241 J3QW42 95 aa12.33□□□□□ -0.43
CSNK1D-217ENST00000581241 CTSSP25774 331 aa12.33□□□□□ -0.43
CSNK1D-217ENST00000581241 LINC00469Q8N7U9 141 aa12.33□□□□□ -0.43
CSNK1D-217ENST00000581241 FAM169BQ8N8A8 192 aa12.33□□□□□ -0.43
CSNK1D-217ENST00000581241 IGHV3OR16-12A0A075B7B8 117 aa12.33□□□□□ -0.44
CSNK1D-217ENST00000581241 CA1P00915 261 aaPredicted RBP12.33□□□□□ -0.44
CSNK1D-217ENST00000581241 FAM74A4Q5TZK3 123 aa12.33□□□□□ -0.44
CSNK1D-217ENST00000581241 CRYBA2P53672 197 aa12.33□□□□□ -0.44
CSNK1D-217ENST00000581241 TMEM170BQ5T4T1 132 aa12.33□□□□□ -0.44
CSNK1D-217ENST00000581241 LDLRAD4O15165 306 aa12.33□□□□□ -0.44
CSNK1D-217ENST00000581241 GREM1O60565 184 aa12.33□□□□□ -0.44
CSNK1D-217ENST00000581241 RPL23P62829 140 aaKnown RBP12.33□□□□□ -0.44
CSNK1D-217ENST00000581241 A0A1B0GTI1 187 aa12.33□□□□□ -0.44
CSNK1D-217ENST00000581241 C1QL2Q7Z5L3 287 aa12.33□□□□□ -0.44
CSNK1D-217ENST00000581241 MRAP2Q96G30 205 aa12.33□□□□□ -0.44
CSNK1D-217ENST00000581241 SNAI2O43623 268 aa12.32□□□□□ -0.44
CSNK1D-217ENST00000581241 UCP1P25874 307 aa12.32□□□□□ -0.44
CSNK1D-217ENST00000581241 SRSF3P84103 164 aaKnown RBP12.32□□□□□ -0.44
CSNK1D-217ENST00000581241 ZNF324BQ6AW86 544 aaPredicted RBP12.32□□□□□ -0.44
CSNK1D-217ENST00000581241 FAM159AQ6UWV7 190 aa12.32□□□□□ -0.44
CSNK1D-217ENST00000581241 ACP7Q6ZNF0 438 aa12.32□□□□□ -0.44
CSNK1D-217ENST00000581241 SCGB3A1Q96QR1 104 aa12.32□□□□□ -0.44
CSNK1D-217ENST00000581241 WDR82Q6UXN9 313 aa12.32□□□□□ -0.44
CSNK1D-217ENST00000581241 DNM1P46Q6ZS02 220 aa12.32□□□□□ -0.44
CSNK1D-217ENST00000581241 ZNF525Q8N782 197 aa12.32□□□□□ -0.44
CSNK1D-217ENST00000581241 DERL1Q9BUN8 251 aa12.32□□□□□ -0.44
CSNK1D-217ENST00000581241 COL5A3P25940 1745 aaPredicted RBP12.32□□□□□ -0.44
CSNK1D-217ENST00000581241 SYNGR3O43761 229 aa12.32□□□□□ -0.44
CSNK1D-217ENST00000581241 NDUFAF3Q9BU61 184 aa12.32□□□□□ -0.44
CSNK1D-217ENST00000581241 GPR183P32249 361 aa12.32□□□□□ -0.44
CSNK1D-217ENST00000581241 ASIPP42127 132 aa12.32□□□□□ -0.44
CSNK1D-217ENST00000581241 LAMTOR2Q9Y2Q5 125 aa12.32□□□□□ -0.44
CSNK1D-217ENST00000581241 Q6AWC8 147 aa12.32□□□□□ -0.44
CSNK1D-217ENST00000581241 COL11A1P12107 1806 aaPredicted RBP12.31□□□□□ -0.44
CSNK1D-217ENST00000581241 A0A1B0GUT8 65 aa12.31□□□□□ -0.44
CSNK1D-217ENST00000581241 IGFBP3P17936 291 aaPredicted RBP12.31□□□□□ -0.44
CSNK1D-217ENST00000581241 SCARF2Q96GP6 870 aaPredicted RBP12.31□□□□□ -0.44
CSNK1D-217ENST00000581241 WBP1LQ9NX94 342 aa12.31□□□□□ -0.44
CSNK1D-217ENST00000581241 F8VVB4 439 aa12.31□□□□□ -0.44
CSNK1D-217ENST00000581241 F8VWA3 439 aa12.31□□□□□ -0.44
CSNK1D-217ENST00000581241 PCOLCEQ15113 449 aa12.31□□□□□ -0.44
CSNK1D-217ENST00000581241 LOC105371242A0A075B767 164 aa12.31□□□□□ -0.44
CSNK1D-217ENST00000581241 NBEAP1P0C6P0 100 aa12.31□□□□□ -0.44
CSNK1D-217ENST00000581241 CLEC2AQ6UVW9 174 aa12.31□□□□□ -0.44
CSNK1D-217ENST00000581241 C2orf88Q9BSF0 95 aa12.31□□□□□ -0.44
CSNK1D-217ENST00000581241 RNF126Q9BV68 326 aa12.31□□□□□ -0.44
CSNK1D-217ENST00000581241 SERF1AO75920 110 aa12.31□□□□□ -0.44
CSNK1D-217ENST00000581241 CTSBP07858 339 aa12.31□□□□□ -0.44
CSNK1D-217ENST00000581241 MIR17HGQ75NE6 70 aa12.31□□□□□ -0.44
CSNK1D-217ENST00000581241 ST6GALNAC3Q8NDV1 305 aa12.31□□□□□ -0.44
CSNK1D-217ENST00000581241 PIMREGQ9BSJ6 248 aa12.31□□□□□ -0.44
CSNK1D-217ENST00000581241 NRN1Q9NPD7 142 aa12.31□□□□□ -0.44
CSNK1D-217ENST00000581241 SHANK3Q9BYB0 1731 aa12.3□□□□□ -0.44
CSNK1D-217ENST00000581241 PGPEP1LA6NFU8 196 aa12.3□□□□□ -0.44
CSNK1D-217ENST00000581241 MESP2Q0VG99 397 aa12.3□□□□□ -0.44
CSNK1D-217ENST00000581241 FAM19A2Q8N3H0 131 aa12.3□□□□□ -0.44
CSNK1D-217ENST00000581241 OR13C6PQ8NH95 151 aa12.3□□□□□ -0.44
CSNK1D-217ENST00000581241 C5orf30Q96GV9 206 aa12.3□□□□□ -0.44
CSNK1D-217ENST00000581241 IGHV3-48P01763 117 aa12.3□□□□□ -0.44
CSNK1D-217ENST00000581241 SNRPD3P62318 126 aaKnown RBP12.3□□□□□ -0.44
CSNK1D-217ENST00000581241 OR10J3Q5JRS4 329 aa12.3□□□□□ -0.44
CSNK1D-217ENST00000581241 ZNF236Q9UL36 1845 aa12.3□□□□□ -0.44
CSNK1D-217ENST00000581241 C17orf98A8MV24 154 aa12.3□□□□□ -0.44
CSNK1D-217ENST00000581241 NDUFA3O95167 84 aa12.3□□□□□ -0.44
CSNK1D-217ENST00000581241 OR5A1Q8NGJ0 315 aa12.29□□□□□ -0.44
CSNK1D-217ENST00000581241 PTPRFP10586 1907 aa12.29□□□□□ -0.44
CSNK1D-217ENST00000581241 TRAV24A0A0B4J272 114 aa12.29□□□□□ -0.44
CSNK1D-217ENST00000581241 SPAARA0A1B0GVQ0 90 aa12.29□□□□□ -0.44
CSNK1D-217ENST00000581241 OSR1Q8TAX0 266 aaPredicted RBP12.29□□□□□ -0.44
CSNK1D-217ENST00000581241 TMEM101Q96IK0 257 aa12.29□□□□□ -0.44
CSNK1D-217ENST00000581241 FAM181BA6NEQ2 426 aa12.29□□□□□ -0.44
CSNK1D-217ENST00000581241 TM4SF5O14894 197 aa12.29□□□□□ -0.44
CSNK1D-217ENST00000581241 SUMO2P61956 95 aaKnown RBP12.29□□□□□ -0.44
CSNK1D-217ENST00000581241 FBLN7Q53RD9 439 aa12.29□□□□□ -0.44
CSNK1D-217ENST00000581241 H7C1H1 209 aa12.29□□□□□ -0.44
CSNK1D-217ENST00000581241 PNKDQ8N490 385 aa12.29□□□□□ -0.44
CSNK1D-217ENST00000581241 TMEM74BQ9NUR3 256 aa12.29□□□□□ -0.44
CSNK1D-217ENST00000581241 LEPP41159 167 aa12.29□□□□□ -0.44
CSNK1D-217ENST00000581241 PRDM13Q9H4Q3 707 aa12.29□□□□□ -0.44
CSNK1D-217ENST00000581241 HS3ST3B1Q9Y662 390 aa12.29□□□□□ -0.44
CSNK1D-217ENST00000581241 C12orf77C9JDV5 145 aa12.28□□□□□ -0.44
CSNK1D-217ENST00000581241 H3BUT2 72 aa12.28□□□□□ -0.44
CSNK1D-217ENST00000581241 ZXDCQ2QGD7 858 aaPredicted RBP12.28□□□□□ -0.44
CSNK1D-217ENST00000581241 OR52E5Q8NH55 327 aa12.28□□□□□ -0.44
CSNK1D-217ENST00000581241 IGHV1-69-2A0A0G2JMI3 117 aa12.28□□□□□ -0.44
CSNK1D-217ENST00000581241 FGF16O43320 207 aa12.28□□□□□ -0.44
CSNK1D-217ENST00000581241 TBX6O95947 436 aaPredicted RBP12.28□□□□□ -0.44
CSNK1D-217ENST00000581241 LINC00114Q6XXX2 140 aa12.28□□□□□ -0.44
CSNK1D-217ENST00000581241 OR4X2Q8NGF9 303 aa12.28□□□□□ -0.44
CSNK1D-217ENST00000581241 GDF15Q99988 308 aa12.28□□□□□ -0.44
CSNK1D-217ENST00000581241 Q9H3A6 140 aa12.28□□□□□ -0.44
CSNK1D-217ENST00000581241 ANKRD36A6QL64 1941 aa12.28□□□□□ -0.44
CSNK1D-217ENST00000581241 SFTPCP11686 197 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms