RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 BLCAPP62952 87 aa2.38□□□□□ -2.03
HERC1-215ENST00000561436 GNG3P63215 75 aa2.38□□□□□ -2.03
HERC1-215ENST00000561436 FAM3AP98173 230 aa2.38□□□□□ -2.03
HERC1-215ENST00000561436 MAPRE2Q15555 327 aa2.38□□□□□ -2.03
HERC1-215ENST00000561436 MRPL23Q16540 153 aaKnown RBP2.38□□□□□ -2.03
HERC1-215ENST00000561436 SMIM21Q3B7S5 101 aa2.38□□□□□ -2.03
HERC1-215ENST00000561436 CEACAM21Q3KPI0 293 aa2.38□□□□□ -2.03
HERC1-215ENST00000561436 LY6G6FQ5SQ64 297 aa2.38□□□□□ -2.03
HERC1-215ENST00000561436 FAM27D1Q5T7N8 215 aa2.38□□□□□ -2.03
HERC1-215ENST00000561436 UBE2UQ5VVX9 321 aa2.38□□□□□ -2.03
HERC1-215ENST00000561436 NANOGP8Q6NSW7 305 aa2.38□□□□□ -2.03
HERC1-215ENST00000561436 DEGS2Q6QHC5 323 aa2.38□□□□□ -2.03
HERC1-215ENST00000561436 SMARCD3Q6STE5 483 aa2.38□□□□□ -2.03
HERC1-215ENST00000561436 RBM45Q8IUH3 476 aaKnown RBP2.38□□□□□ -2.03
HERC1-215ENST00000561436 CMTM1Q8IZ96 169 aa2.38□□□□□ -2.03
HERC1-215ENST00000561436 PGAM4Q8N0Y7 254 aa2.38□□□□□ -2.03
HERC1-215ENST00000561436 OR6V1Q8N148 313 aa2.38□□□□□ -2.03
HERC1-215ENST00000561436 C10orf111Q8N326 155 aa2.38□□□□□ -2.03
HERC1-215ENST00000561436 JAGN1Q8N5M9 183 aa2.38□□□□□ -2.03
HERC1-215ENST00000561436 FAM216BQ8N7L0 139 aa2.38□□□□□ -2.03
HERC1-215ENST00000561436 OR4D11Q8NGI4 311 aa2.38□□□□□ -2.03
HERC1-215ENST00000561436 OR9I1Q8NGQ6 314 aa2.38□□□□□ -2.03
HERC1-215ENST00000561436 OR51A7Q8NH64 312 aa2.38□□□□□ -2.03
HERC1-215ENST00000561436 OR10A6Q8NH74 314 aa2.38□□□□□ -2.03
HERC1-215ENST00000561436 OR5P3Q8WZ94 311 aa2.38□□□□□ -2.03
HERC1-215ENST00000561436 H1FXQ92522 213 aaKnown RBP2.38□□□□□ -2.03
HERC1-215ENST00000561436 SLC7A6Q92536 515 aa2.38□□□□□ -2.03
HERC1-215ENST00000561436 TMEM230Q96A57 120 aa2.38□□□□□ -2.03
HERC1-215ENST00000561436 EEF1AKMT3Q96AZ1 226 aa2.38□□□□□ -2.03
HERC1-215ENST00000561436 ISOC1Q96CN7 298 aa2.38□□□□□ -2.03
HERC1-215ENST00000561436 Q96M85 177 aa2.38□□□□□ -2.03
HERC1-215ENST00000561436 GAFA1Q96PS6 74 aa2.38□□□□□ -2.03
HERC1-215ENST00000561436 AUNIPQ9H7T9 357 aa2.38□□□□□ -2.03
HERC1-215ENST00000561436 RHOFQ9HBH0 211 aa2.38□□□□□ -2.03
HERC1-215ENST00000561436 GID8Q9NWU2 228 aa2.38□□□□□ -2.03
HERC1-215ENST00000561436 MTCH1Q9NZJ7 389 aa2.38□□□□□ -2.03
HERC1-215ENST00000561436 CCDC167Q9P0B6 97 aa2.38□□□□□ -2.03
HERC1-215ENST00000561436 GLS2Q9UI32 602 aa2.38□□□□□ -2.03
HERC1-215ENST00000561436 ZNF222Q9UK12 451 aa2.38□□□□□ -2.03
HERC1-215ENST00000561436 BAIAP2Q9UQB8 552 aa2.38□□□□□ -2.03
HERC1-215ENST00000561436 FAM32AQ9Y421 112 aaKnown RBP2.38□□□□□ -2.03
HERC1-215ENST00000561436 DNAJC13O75165 2243 aa2.38□□□□□ -2.03
HERC1-215ENST00000561436 SNRNP200O75643 2136 aaKnown RBP2.38□□□□□ -2.03
HERC1-215ENST00000561436 ARHGAP21Q5T5U3 1957 aa2.38□□□□□ -2.03
HERC1-215ENST00000561436 FREM1Q5H8C1 2179 aa2.37□□□□□ -2.03
HERC1-215ENST00000561436 CR1P17927 2039 aa2.37□□□□□ -2.03
HERC1-215ENST00000561436 SCN3AQ9NY46 2000 aa2.37□□□□□ -2.03
HERC1-215ENST00000561436 IGKV1D-17A0A075B6S4 117 aa2.37□□□□□ -2.03
HERC1-215ENST00000561436 TRAV27A0A087WT01 109 aa2.37□□□□□ -2.03
HERC1-215ENST00000561436 A0A087WUU8 490 aa2.37□□□□□ -2.03
HERC1-215ENST00000561436 LEUTXA8MZ59 168 aa2.37□□□□□ -2.03
HERC1-215ENST00000561436 CDC42EP2O14613 210 aa2.37□□□□□ -2.03
HERC1-215ENST00000561436 CCNB2O95067 398 aa2.37□□□□□ -2.03
HERC1-215ENST00000561436 ARG1P05089 322 aa2.37□□□□□ -2.03
HERC1-215ENST00000561436 GNAO1P09471 354 aa2.37□□□□□ -2.03
HERC1-215ENST00000561436 CT45A6P0DMU7 189 aa2.37□□□□□ -2.03
HERC1-215ENST00000561436 CT45A5P0DMU8 189 aa2.37□□□□□ -2.03
HERC1-215ENST00000561436 CT45A7P0DMV0 189 aa2.37□□□□□ -2.03
HERC1-215ENST00000561436 OR5H8P0DN80 308 aa2.37□□□□□ -2.03
HERC1-215ENST00000561436 CD34P28906 385 aa2.37□□□□□ -2.03
HERC1-215ENST00000561436 ERP29P30040 261 aaKnown RBP2.37□□□□□ -2.03
HERC1-215ENST00000561436 KRTAP10-8P60410 259 aa2.37□□□□□ -2.03
HERC1-215ENST00000561436 CDC42P60953 191 aa2.37□□□□□ -2.03
HERC1-215ENST00000561436 RUNX1Q01196 453 aa2.37□□□□□ -2.03
HERC1-215ENST00000561436 MXD1Q05195 221 aa2.37□□□□□ -2.03
HERC1-215ENST00000561436 LY6EQ16553 131 aa2.37□□□□□ -2.03
HERC1-215ENST00000561436 POU2AF1Q16633 256 aa2.37□□□□□ -2.03
HERC1-215ENST00000561436 KRTAP13-3Q3SY46 172 aa2.37□□□□□ -2.03
HERC1-215ENST00000561436 CT45A1Q5HYN5 189 aa2.37□□□□□ -2.03
HERC1-215ENST00000561436 SOHLH1Q5JUK2 328 aa2.37□□□□□ -2.03
HERC1-215ENST00000561436 GLYATL3Q5SZD4 288 aa2.37□□□□□ -2.03
HERC1-215ENST00000561436 Q6P435 159 aa2.37□□□□□ -2.03
HERC1-215ENST00000561436 OR2W3Q7Z3T1 314 aa2.37□□□□□ -2.03
HERC1-215ENST00000561436 LYPD6Q86Y78 171 aa2.37□□□□□ -2.03
HERC1-215ENST00000561436 ZNF695Q8IW36 515 aa2.37□□□□□ -2.03
HERC1-215ENST00000561436 PDZD9Q8IXQ8 264 aa2.37□□□□□ -2.03
HERC1-215ENST00000561436 Q8IYB0 196 aa2.37□□□□□ -2.03
HERC1-215ENST00000561436 MICU2Q8IYU8 434 aa2.37□□□□□ -2.03
HERC1-215ENST00000561436 SAXO1Q8IYX7 474 aa2.37□□□□□ -2.03
HERC1-215ENST00000561436 STPG2Q8N412 459 aa2.37□□□□□ -2.03
HERC1-215ENST00000561436 DRAM1Q8N682 238 aa2.37□□□□□ -2.03
HERC1-215ENST00000561436 CT45A3Q8NHU0 189 aa2.37□□□□□ -2.03
HERC1-215ENST00000561436 LYPD6BQ8NI32 183 aa2.37□□□□□ -2.03
HERC1-215ENST00000561436 RNF133Q8WVZ7 376 aa2.37□□□□□ -2.03
HERC1-215ENST00000561436 GALNT14Q96FL9 552 aa2.37□□□□□ -2.03
HERC1-215ENST00000561436 REEP6Q96HR9 211 aa2.37□□□□□ -2.03
HERC1-215ENST00000561436 RNF170Q96K19 258 aa2.37□□□□□ -2.03
HERC1-215ENST00000561436 OR52B2Q96RD2 323 aa2.37□□□□□ -2.03
HERC1-215ENST00000561436 HOPXQ9BPY8 73 aaPredicted RBP2.37□□□□□ -2.03
HERC1-215ENST00000561436 TM2D3Q9BRN9 247 aa2.37□□□□□ -2.03
HERC1-215ENST00000561436 COPS4Q9BT78 406 aa2.37□□□□□ -2.03
HERC1-215ENST00000561436 ACTR3CQ9C0K3 210 aaPredicted RBP2.37□□□□□ -2.03
HERC1-215ENST00000561436 OR51I2Q9H344 312 aa2.37□□□□□ -2.03
HERC1-215ENST00000561436 NCOR1P1Q9H4R4 102 aa2.37□□□□□ -2.03
HERC1-215ENST00000561436 MRM2Q9UI43 246 aaKnown RBP2.37□□□□□ -2.03
HERC1-215ENST00000561436 HHLA2Q9UM44 414 aa2.37□□□□□ -2.03
HERC1-215ENST00000561436 IER3IP1Q9Y5U9 82 aa2.37□□□□□ -2.03
HERC1-215ENST00000561436 LINC00312Q9Y6C7 94 aa2.37□□□□□ -2.03
HERC1-215ENST00000561436 ENPP4Q9Y6X5 453 aa2.37□□□□□ -2.03
HERC1-215ENST00000561436 IGHV3OR15-7A0A075B7D8 119 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms