RNA–Protein interactions for RNA: ENST00000489892.1

TRIM40-208, Transcript of tripartite motif containing 40, humanhuman

TSL 3

Gene TRIM40, Length 941 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-208ENST00000489892 FAM157AC9JC47 383 aa9.49□□□□□ -0.89
TRIM40-208ENST00000489892 BUB1B-PAK6H3BSN5 160 aa9.49□□□□□ -0.89
TRIM40-208ENST00000489892 FCGR3BO75015 233 aa9.49□□□□□ -0.89
TRIM40-208ENST00000489892 PRH1P02810 166 aa9.49□□□□□ -0.89
TRIM40-208ENST00000489892 ARG1P05089 322 aa9.49□□□□□ -0.89
TRIM40-208ENST00000489892 NQO2P16083 231 aa9.49□□□□□ -0.89
TRIM40-208ENST00000489892 UBE2E1P51965 193 aa9.49□□□□□ -0.89
TRIM40-208ENST00000489892 TAS2R30P59541 319 aa9.49□□□□□ -0.89
TRIM40-208ENST00000489892 ZNF616Q08AN1 781 aa9.49□□□□□ -0.89
TRIM40-208ENST00000489892 GUK1Q16774 197 aa9.49□□□□□ -0.89
TRIM40-208ENST00000489892 VMO1Q7Z5L0 202 aa9.49□□□□□ -0.89
TRIM40-208ENST00000489892 PDPNQ86YL7 162 aa9.49□□□□□ -0.89
TRIM40-208ENST00000489892 ODF3L1Q8IXM7 274 aa9.49□□□□□ -0.89
TRIM40-208ENST00000489892 TEX29Q8N6K0 151 aa9.49□□□□□ -0.89
TRIM40-208ENST00000489892 Q8N7P7 452 aa9.49□□□□□ -0.89
TRIM40-208ENST00000489892 OSR1Q8TAX0 266 aaPredicted RBP9.49□□□□□ -0.89
TRIM40-208ENST00000489892 ST6GALNAC6Q969X2 333 aa9.49□□□□□ -0.89
TRIM40-208ENST00000489892 RBMXL1Q96E39 390 aaKnown RBP9.49□□□□□ -0.89
TRIM40-208ENST00000489892 SMIM3Q9BZL3 60 aa9.49□□□□□ -0.89
TRIM40-208ENST00000489892 MLXQ9UH92 298 aa9.49□□□□□ -0.89
TRIM40-208ENST00000489892 WASHC3Q9Y3C0 194 aa9.49□□□□□ -0.89
TRIM40-208ENST00000489892 WNK2Q9Y3S1 2297 aa9.49□□□□□ -0.89
TRIM40-208ENST00000489892 JMJD1CQ15652 2540 aa9.48□□□□□ -0.89
TRIM40-208ENST00000489892 LY86O95711 162 aa9.48□□□□□ -0.89
TRIM40-208ENST00000489892 OR8U8P0C7N1 319 aa9.48□□□□□ -0.89
TRIM40-208ENST00000489892 PAX8Q06710 450 aa9.48□□□□□ -0.89
TRIM40-208ENST00000489892 ZNF816Q0VGE8 651 aaPredicted RBP9.48□□□□□ -0.89
TRIM40-208ENST00000489892 RNF212Q495C1 297 aa9.48□□□□□ -0.89
TRIM40-208ENST00000489892 FAM53AQ6NSI3 398 aaPredicted RBP9.48□□□□□ -0.89
TRIM40-208ENST00000489892 H2BFWTQ7Z2G1 175 aa9.48□□□□□ -0.89
TRIM40-208ENST00000489892 TMEM252Q8N6L7 170 aa9.48□□□□□ -0.89
TRIM40-208ENST00000489892 OR5AN1Q8NGI8 311 aa9.48□□□□□ -0.89
TRIM40-208ENST00000489892 OR4P4Q8NGL7 312 aa9.48□□□□□ -0.89
TRIM40-208ENST00000489892 DDB2Q92466 427 aa9.48□□□□□ -0.89
TRIM40-208ENST00000489892 ATP5SQ99766 215 aa9.48□□□□□ -0.89
TRIM40-208ENST00000489892 ZNF251Q9BRH9 671 aa9.48□□□□□ -0.89
TRIM40-208ENST00000489892 SIRT7Q9NRC8 400 aa9.48□□□□□ -0.89
TRIM40-208ENST00000489892 SLC35D1Q9NTN3 355 aa9.48□□□□□ -0.89
TRIM40-208ENST00000489892 COA4Q9NYJ1 87 aa9.48□□□□□ -0.89
TRIM40-208ENST00000489892 KIAA1456Q9P272 454 aa9.48□□□□□ -0.89
TRIM40-208ENST00000489892 WSB1Q9Y6I7 421 aa9.48□□□□□ -0.89
TRIM40-208ENST00000489892 IGSF23A1L1A6 192 aa9.47□□□□□ -0.89
TRIM40-208ENST00000489892 MARCH11A6NNE9 402 aa9.47□□□□□ -0.89
TRIM40-208ENST00000489892 LINC00473A8K010 186 aa9.47□□□□□ -0.89
TRIM40-208ENST00000489892 ODF3BA8MYP8 253 aa9.47□□□□□ -0.89
TRIM40-208ENST00000489892 FOSL1P15407 271 aa9.47□□□□□ -0.89
TRIM40-208ENST00000489892 NPBWR1P48145 328 aa9.47□□□□□ -0.89
TRIM40-208ENST00000489892 BPIFB3P59826 476 aa9.47□□□□□ -0.89
TRIM40-208ENST00000489892 RPL30P62888 115 aaKnown RBP9.47□□□□□ -0.89
TRIM40-208ENST00000489892 AKR1C1Q04828 323 aa9.47□□□□□ -0.89
TRIM40-208ENST00000489892 ZNF585BQ52M93 769 aa9.47□□□□□ -0.89
TRIM40-208ENST00000489892 ZNF383Q8NA42 475 aa9.47□□□□□ -0.89
TRIM40-208ENST00000489892 OR4C13Q8NGP0 309 aa9.47□□□□□ -0.89
TRIM40-208ENST00000489892 VSTM2AQ8TAG5 236 aa9.47□□□□□ -0.89
TRIM40-208ENST00000489892 C5orf30Q96GV9 206 aa9.47□□□□□ -0.89
TRIM40-208ENST00000489892 RNF5Q99942 180 aa9.47□□□□□ -0.89
TRIM40-208ENST00000489892 MRPL20Q9BYC9 149 aaKnown RBP9.47□□□□□ -0.89
TRIM40-208ENST00000489892 SLC35B3Q9H1N7 401 aa9.47□□□□□ -0.89
TRIM40-208ENST00000489892 TMEM231Q9H6L2 316 aa9.47□□□□□ -0.89
TRIM40-208ENST00000489892 WFDC1Q9HC57 220 aa9.47□□□□□ -0.89
TRIM40-208ENST00000489892 BIN3Q9NQY0 253 aa9.47□□□□□ -0.89
TRIM40-208ENST00000489892 FAM96BQ9Y3D0 163 aa9.47□□□□□ -0.89
TRIM40-208ENST00000489892 TLN2Q9Y4G6 2542 aa9.46□□□□□ -0.89
TRIM40-208ENST00000489892 H0YJW9 148 aa9.46□□□□□ -0.9
TRIM40-208ENST00000489892 NUPL2O15504 423 aaKnown RBP9.46□□□□□ -0.9
TRIM40-208ENST00000489892 SSSCA1O60232 199 aa9.46□□□□□ -0.9
TRIM40-208ENST00000489892 RAMP3O60896 148 aa9.46□□□□□ -0.9
TRIM40-208ENST00000489892 PROP1O75360 226 aa9.46□□□□□ -0.9
TRIM40-208ENST00000489892 NDUFS6O75380 124 aaKnown RBP9.46□□□□□ -0.9
TRIM40-208ENST00000489892 IFNA5P01569 189 aa9.46□□□□□ -0.9
TRIM40-208ENST00000489892 IFNA4P05014 189 aa9.46□□□□□ -0.9
TRIM40-208ENST00000489892 CT45A6P0DMU7 189 aa9.46□□□□□ -0.9
TRIM40-208ENST00000489892 CT45A5P0DMU8 189 aa9.46□□□□□ -0.9
TRIM40-208ENST00000489892 CT45A7P0DMV0 189 aa9.46□□□□□ -0.9
TRIM40-208ENST00000489892 ATP6V0CP27449 155 aa9.46□□□□□ -0.9
TRIM40-208ENST00000489892 LGALS7P47929 136 aa9.46□□□□□ -0.9
TRIM40-208ENST00000489892 SULT1A1P50225 295 aa9.46□□□□□ -0.9
TRIM40-208ENST00000489892 RAB5BP61020 215 aa9.46□□□□□ -0.9
TRIM40-208ENST00000489892 POLR2GP62487 172 aaKnown RBP eCLIP9.46□□□□□ -0.9
TRIM40-208ENST00000489892 HBG1P69891 147 aa9.46□□□□□ -0.9
TRIM40-208ENST00000489892 HBG2P69892 147 aa9.46□□□□□ -0.9
TRIM40-208ENST00000489892 SRSF3P84103 164 aaKnown RBP9.46□□□□□ -0.9
TRIM40-208ENST00000489892 NHLH2Q02577 135 aa9.46□□□□□ -0.9
TRIM40-208ENST00000489892 CLINT1Q14677 625 aa9.46□□□□□ -0.9
TRIM40-208ENST00000489892 POU2AF1Q16633 256 aa9.46□□□□□ -0.9
TRIM40-208ENST00000489892 OR2B11Q5JQS5 317 aa9.46□□□□□ -0.9
TRIM40-208ENST00000489892 AKR1C8PQ5T2L2 129 aa9.46□□□□□ -0.9
TRIM40-208ENST00000489892 TPTE2P1Q5T6R2 138 aa9.46□□□□□ -0.9
TRIM40-208ENST00000489892 TMEM182Q6ZP80 229 aaPredicted RBP9.46□□□□□ -0.9
TRIM40-208ENST00000489892 HSD17B11Q8NBQ5 300 aa9.46□□□□□ -0.9
TRIM40-208ENST00000489892 OR2G3Q8NGZ4 309 aa9.46□□□□□ -0.9
TRIM40-208ENST00000489892 LHX4Q969G2 390 aa9.46□□□□□ -0.9
TRIM40-208ENST00000489892 FLYWCH2Q96CP2 140 aaKnown RBP9.46□□□□□ -0.9
TRIM40-208ENST00000489892 R3HDM4Q96D70 268 aa9.46□□□□□ -0.9
TRIM40-208ENST00000489892 GPHA2Q96T91 129 aa9.46□□□□□ -0.9
TRIM40-208ENST00000489892 PSMG3Q9BT73 122 aaPredicted RBP9.46□□□□□ -0.9
TRIM40-208ENST00000489892 EIF5A2Q9GZV4 153 aaKnown RBP9.46□□□□□ -0.9
TRIM40-208ENST00000489892 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.45□□□□□ -0.9
TRIM40-208ENST00000489892 A0A096LNT2 108 aa9.45□□□□□ -0.9
TRIM40-208ENST00000489892 FAM24AA6NFZ4 105 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms