RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 ABCA4P78363 2273 aa9.85□□□□□ -0.83
TRA2B-214ENST00000487615 IGHV1-46P01743 117 aa9.85□□□□□ -0.83
TRA2B-214ENST00000487615 RAB4AP20338 218 aa9.85□□□□□ -0.83
TRA2B-214ENST00000487615 ZNF343Q6P1L6 599 aa9.85□□□□□ -0.83
TRA2B-214ENST00000487615 A0A0G2JRQ6 117 aa9.84□□□□□ -0.83
TRA2B-214ENST00000487615 GFRA3O60609 400 aa9.84□□□□□ -0.83
TRA2B-214ENST00000487615 TCL1AP56279 114 aa9.84□□□□□ -0.83
TRA2B-214ENST00000487615 COX19Q49B96 90 aa9.84□□□□□ -0.83
TRA2B-214ENST00000487615 HCP5Q6MZN7 132 aa9.84□□□□□ -0.83
TRA2B-214ENST00000487615 ZNF705AQ6ZN79 300 aaPredicted RBP9.84□□□□□ -0.83
TRA2B-214ENST00000487615 CYP2G1PQ6ZSU1 146 aa9.84□□□□□ -0.83
TRA2B-214ENST00000487615 CD177Q8N6Q3 437 aa9.84□□□□□ -0.83
TRA2B-214ENST00000487615 PACRGQ96M98 296 aaPredicted RBP9.84□□□□□ -0.83
TRA2B-214ENST00000487615 NDFIP1Q9BT67 221 aa9.84□□□□□ -0.83
TRA2B-214ENST00000487615 PAXXQ9BUH6 204 aa9.84□□□□□ -0.83
TRA2B-214ENST00000487615 ZNF430Q9H8G1 570 aaPredicted RBP9.84□□□□□ -0.83
TRA2B-214ENST00000487615 GNG7O60262 68 aa9.84□□□□□ -0.83
TRA2B-214ENST00000487615 HSBP1O75506 76 aa9.84□□□□□ -0.83
TRA2B-214ENST00000487615 LGALS7P47929 136 aa9.84□□□□□ -0.83
TRA2B-214ENST00000487615 SMIM15Q7Z3B0 74 aa9.84□□□□□ -0.83
TRA2B-214ENST00000487615 LINC01560Q8TB33 94 aa9.84□□□□□ -0.83
TRA2B-214ENST00000487615 NABP2Q9BQ15 211 aa9.84□□□□□ -0.83
TRA2B-214ENST00000487615 RALYQ9UKM9 306 aaKnown RBP9.84□□□□□ -0.83
TRA2B-214ENST00000487615 PPIAL4CA0A0B4J2A2 164 aa9.84□□□□□ -0.83
TRA2B-214ENST00000487615 CORTO00230 105 aa9.84□□□□□ -0.83
TRA2B-214ENST00000487615 PPIAL4GP0DN37 164 aa9.84□□□□□ -0.83
TRA2B-214ENST00000487615 CRISP2P16562 243 aa9.84□□□□□ -0.83
TRA2B-214ENST00000487615 SRP14P37108 136 aaKnown RBP9.84□□□□□ -0.83
TRA2B-214ENST00000487615 GPR6P46095 362 aaPredicted RBP9.84□□□□□ -0.83
TRA2B-214ENST00000487615 IQCJQ1A5X6 159 aa9.84□□□□□ -0.83
TRA2B-214ENST00000487615 FAM162BQ5T6X4 162 aa9.84□□□□□ -0.83
TRA2B-214ENST00000487615 LINC00518Q8N0U6 118 aa9.84□□□□□ -0.83
TRA2B-214ENST00000487615 IGHV3-21A0A0B4J1V1 117 aa9.84□□□□□ -0.83
TRA2B-214ENST00000487615 SFTPCP11686 197 aa9.84□□□□□ -0.83
TRA2B-214ENST00000487615 SELLP14151 372 aa9.84□□□□□ -0.83
TRA2B-214ENST00000487615 RND2P52198 227 aa9.84□□□□□ -0.83
TRA2B-214ENST00000487615 CCDC144NLQ6NUI1 221 aa9.84□□□□□ -0.83
TRA2B-214ENST00000487615 SPNS3Q6ZMD2 512 aa9.84□□□□□ -0.83
TRA2B-214ENST00000487615 ZCCHC24Q8N2G6 241 aaKnown RBP9.84□□□□□ -0.83
TRA2B-214ENST00000487615 Q8NFD4 153 aa9.84□□□□□ -0.83
TRA2B-214ENST00000487615 C1RLQ9NZP8 487 aa9.84□□□□□ -0.83
TRA2B-214ENST00000487615 IL6RP08887 468 aaPredicted RBP9.83□□□□□ -0.84
TRA2B-214ENST00000487615 BRS3P32247 399 aa9.83□□□□□ -0.84
TRA2B-214ENST00000487615 FAM169BQ8N8A8 192 aa9.83□□□□□ -0.84
TRA2B-214ENST00000487615 OR5AU1Q8NGC0 362 aa9.83□□□□□ -0.84
TRA2B-214ENST00000487615 MS4A10Q96PG2 267 aa9.83□□□□□ -0.84
TRA2B-214ENST00000487615 PCGF1Q9BSM1 259 aa9.83□□□□□ -0.84
TRA2B-214ENST00000487615 METTL1Q9UBP6 276 aaKnown RBP9.83□□□□□ -0.84
TRA2B-214ENST00000487615 DOCK11Q5JSL3 2073 aa9.83□□□□□ -0.84
TRA2B-214ENST00000487615 A0A087WWC5 75 aa9.83□□□□□ -0.84
TRA2B-214ENST00000487615 C8orf88P0DMB2 117 aa9.83□□□□□ -0.84
TRA2B-214ENST00000487615 EGR1P18146 543 aa9.83□□□□□ -0.84
TRA2B-214ENST00000487615 WDR25Q64LD2 544 aaPredicted RBP9.83□□□□□ -0.84
TRA2B-214ENST00000487615 Q6ZRM9 215 aa9.83□□□□□ -0.84
TRA2B-214ENST00000487615 ZGRF1Q86YA3 2104 aa9.83□□□□□ -0.84
TRA2B-214ENST00000487615 C19orf24Q9BVV8 132 aa9.83□□□□□ -0.84
TRA2B-214ENST00000487615 UBTD1Q9HAC8 227 aa9.83□□□□□ -0.84
TRA2B-214ENST00000487615 BARX1Q9HBU1 254 aaPredicted RBP9.83□□□□□ -0.84
TRA2B-214ENST00000487615 MIOXQ9UGB7 285 aa9.83□□□□□ -0.84
TRA2B-214ENST00000487615 HYPMO75409 117 aa9.83□□□□□ -0.84
TRA2B-214ENST00000487615 OR9G9P0C7N8 305 aa9.83□□□□□ -0.84
TRA2B-214ENST00000487615 CCL3L1P16619 93 aa9.83□□□□□ -0.84
TRA2B-214ENST00000487615 IL15RAQ13261 267 aa9.83□□□□□ -0.84
TRA2B-214ENST00000487615 MST1LQ2TV78 715 aa9.83□□□□□ -0.84
TRA2B-214ENST00000487615 ZNF474Q6S9Z5 364 aaPredicted RBP9.83□□□□□ -0.84
TRA2B-214ENST00000487615 MBD3L1Q8WWY6 194 aa9.83□□□□□ -0.84
TRA2B-214ENST00000487615 SPRY4Q9C004 299 aa9.83□□□□□ -0.84
TRA2B-214ENST00000487615 PPP1R14DQ9NXH3 145 aa9.83□□□□□ -0.84
TRA2B-214ENST00000487615 GCHFRP30047 84 aa9.82□□□□□ -0.84
TRA2B-214ENST00000487615 KLRB1Q12918 225 aa9.82□□□□□ -0.84
TRA2B-214ENST00000487615 HLA-DRB5Q30154 266 aa9.82□□□□□ -0.84
TRA2B-214ENST00000487615 CLEC7AQ9BXN2 247 aa9.82□□□□□ -0.84
TRA2B-214ENST00000487615 DNAJC4Q9NNZ3 241 aa9.82□□□□□ -0.84
TRA2B-214ENST00000487615 RFNGQ9Y644 331 aa9.82□□□□□ -0.84
TRA2B-214ENST00000487615 C15orf61A6NNL5 157 aa9.82□□□□□ -0.84
TRA2B-214ENST00000487615 VENTXO95231 258 aa9.82□□□□□ -0.84
TRA2B-214ENST00000487615 ACAA1P09110 424 aaPredicted RBP9.82□□□□□ -0.84
TRA2B-214ENST00000487615 RANP62826 216 aaKnown RBP9.82□□□□□ -0.84
TRA2B-214ENST00000487615 WDR86Q86TI4 376 aa9.82□□□□□ -0.84
TRA2B-214ENST00000487615 SPACA3Q8IXA5 215 aa9.82□□□□□ -0.84
TRA2B-214ENST00000487615 HIF1ANQ9NWT6 349 aa9.82□□□□□ -0.84
TRA2B-214ENST00000487615 HILPDAQ9Y5L2 63 aa9.82□□□□□ -0.84
TRA2B-214ENST00000487615 FAM90A9PA6NNJ1 464 aa9.82□□□□□ -0.84
TRA2B-214ENST00000487615 ADCYAP1P18509 176 aa9.82□□□□□ -0.84
TRA2B-214ENST00000487615 KRTDAPP60985 99 aa9.82□□□□□ -0.84
TRA2B-214ENST00000487615 GATAD1Q8WUU5 269 aa9.82□□□□□ -0.84
TRA2B-214ENST00000487615 DMRTA2Q96SC8 542 aa9.82□□□□□ -0.84
TRA2B-214ENST00000487615 MRPL20Q9BYC9 149 aaKnown RBP9.82□□□□□ -0.84
TRA2B-214ENST00000487615 TNFRSF19Q9NS68 423 aa9.82□□□□□ -0.84
TRA2B-214ENST00000487615 INTS1Q8N201 2190 aaKnown RBP9.82□□□□□ -0.84
TRA2B-214ENST00000487615 ERVK11-1P61568 191 aa9.82□□□□□ -0.84
TRA2B-214ENST00000487615 RPL11P62913 178 aaKnown RBP9.82□□□□□ -0.84
TRA2B-214ENST00000487615 KRTAP27-1Q3LI81 207 aa9.82□□□□□ -0.84
TRA2B-214ENST00000487615 TMEM14EPQ6UXP3 125 aa9.82□□□□□ -0.84
TRA2B-214ENST00000487615 PIP4P1Q86T03 277 aa9.82□□□□□ -0.84
TRA2B-214ENST00000487615 VSIRQ9H7M9 311 aa9.82□□□□□ -0.84
TRA2B-214ENST00000487615 SDF2L1Q9HCN8 221 aa9.82□□□□□ -0.84
TRA2B-214ENST00000487615 SNURFLB1AK76 121 aa9.81□□□□□ -0.84
TRA2B-214ENST00000487615 PMCHP20382 165 aa9.81□□□□□ -0.84
TRA2B-214ENST00000487615 AGAP20933 346 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms