RNA–Protein interactions for RNA: ENST00000477174.1

ACTN4-205, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 544 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-205ENST00000477174 MARCH11A6NNE9 402 aa10.37□□□□□ -0.75
ACTN4-205ENST00000477174 NPIPB5A8MRT5 1133 aa10.37□□□□□ -0.75
ACTN4-205ENST00000477174 TEX22C9J3V5 150 aa10.37□□□□□ -0.75
ACTN4-205ENST00000477174 E7EUB6 86 aa10.37□□□□□ -0.75
ACTN4-205ENST00000477174 RND3P61587 244 aa10.37□□□□□ -0.75
ACTN4-205ENST00000477174 C9orf66Q5T8R8 295 aa10.37□□□□□ -0.75
ACTN4-205ENST00000477174 ZNF343Q6P1L6 599 aa10.37□□□□□ -0.75
ACTN4-205ENST00000477174 FAM223AQ8IWN6 122 aa10.37□□□□□ -0.75
ACTN4-205ENST00000477174 NECAP1Q8NC96 275 aa10.37□□□□□ -0.75
ACTN4-205ENST00000477174 OR4D10Q8NGI6 311 aa10.37□□□□□ -0.75
ACTN4-205ENST00000477174 ZFAND1Q8TCF1 268 aa10.37□□□□□ -0.75
ACTN4-205ENST00000477174 DNAH3Q8TD57 4116 aa10.37□□□□□ -0.75
ACTN4-205ENST00000477174 FYTTD1Q96QD9 318 aaKnown RBP10.37□□□□□ -0.75
ACTN4-205ENST00000477174 SRSF8Q9BRL6 282 aaKnown RBP10.37□□□□□ -0.75
ACTN4-205ENST00000477174 COMMD5Q9GZQ3 224 aa10.37□□□□□ -0.75
ACTN4-205ENST00000477174 TMEM140Q9NV12 185 aa10.37□□□□□ -0.75
ACTN4-205ENST00000477174 ZNF257Q9Y2Q1 563 aa10.37□□□□□ -0.75
ACTN4-205ENST00000477174 IGHV4OR15-8A0A075B7B6 117 aa10.36□□□□□ -0.75
ACTN4-205ENST00000477174 A0A087WW49 117 aa10.36□□□□□ -0.75
ACTN4-205ENST00000477174 A0A1B0GW64 132 aa10.36□□□□□ -0.75
ACTN4-205ENST00000477174 DPPA5A6NC42 116 aa10.36□□□□□ -0.75
ACTN4-205ENST00000477174 HMX3A6NHT5 357 aa10.36□□□□□ -0.75
ACTN4-205ENST00000477174 SEC14L6B5MCN3 397 aa10.36□□□□□ -0.75
ACTN4-205ENST00000477174 DHFRP00374 187 aa10.36□□□□□ -0.75
ACTN4-205ENST00000477174 KRASP01116 189 aa10.36□□□□□ -0.75
ACTN4-205ENST00000477174 PRB2P02812 416 aaPredicted RBP10.36□□□□□ -0.75
ACTN4-205ENST00000477174 CRYGCP07315 174 aa10.36□□□□□ -0.75
ACTN4-205ENST00000477174 PGAM2P15259 253 aa10.36□□□□□ -0.75
ACTN4-205ENST00000477174 ZP3P21754 424 aa10.36□□□□□ -0.75
ACTN4-205ENST00000477174 PTBP1P26599 531 aaKnown RBP eCLIP10.36□□□□□ -0.751e-6■■■■■ 29.3
ACTN4-205ENST00000477174 INSL3P51460 131 aa10.36□□□□□ -0.75
ACTN4-205ENST00000477174 OR2B8PP59922 312 aa10.36□□□□□ -0.75
ACTN4-205ENST00000477174 KLK9Q2XQG4 91 aa10.36□□□□□ -0.75
ACTN4-205ENST00000477174 DCUN1D4Q92564 292 aa10.36□□□□□ -0.75
ACTN4-205ENST00000477174 DLX4Q92988 240 aaPredicted RBP10.36□□□□□ -0.75
ACTN4-205ENST00000477174 KLK9Q9UKQ9 250 aa10.36□□□□□ -0.75
ACTN4-205ENST00000477174 TRAV3A0A0B4J244 114 aa10.35□□□□□ -0.75
ACTN4-205ENST00000477174 DISC1C4P0D8 188 aa10.35□□□□□ -0.75
ACTN4-205ENST00000477174 OVOL1O14753 267 aa10.35□□□□□ -0.75
ACTN4-205ENST00000477174 SNAPC5O75971 98 aa10.35□□□□□ -0.75
ACTN4-205ENST00000477174 SERPINE2P07093 398 aa10.35□□□□□ -0.75
ACTN4-205ENST00000477174 AKAIN1P0CW23 69 aa10.35□□□□□ -0.75
ACTN4-205ENST00000477174 RPA2P15927 270 aa10.35□□□□□ -0.75
ACTN4-205ENST00000477174 PSMB6P28072 239 aa10.35□□□□□ -0.75
ACTN4-205ENST00000477174 HOXD3P31249 432 aaPredicted RBP10.35□□□□□ -0.75
ACTN4-205ENST00000477174 S100A5P33763 92 aa10.35□□□□□ -0.75
ACTN4-205ENST00000477174 ECI1P42126 302 aa10.35□□□□□ -0.75
ACTN4-205ENST00000477174 PIGPP57054 158 aa10.35□□□□□ -0.75
ACTN4-205ENST00000477174 KRTAP10-11P60412 298 aa10.35□□□□□ -0.75
ACTN4-205ENST00000477174 RHOGP84095 191 aa10.35□□□□□ -0.75
ACTN4-205ENST00000477174 ATP5G2Q06055 141 aa10.35□□□□□ -0.75
ACTN4-205ENST00000477174 SCGB2B2Q4G0G5 96 aa10.35□□□□□ -0.75
ACTN4-205ENST00000477174 FAM209BQ5JX69 171 aa10.35□□□□□ -0.75
ACTN4-205ENST00000477174 THOC7Q6I9Y2 204 aaKnown RBP10.35□□□□□ -0.75
ACTN4-205ENST00000477174 TSC22D3Q99576 134 aa10.35□□□□□ -0.75
ACTN4-205ENST00000477174 AKIP1Q9NQ31 210 aa10.35□□□□□ -0.75
ACTN4-205ENST00000477174 AURKAIP1Q9NWT8 199 aaPredicted RBP10.35□□□□□ -0.75
ACTN4-205ENST00000477174 FKBP11Q9NYL4 201 aa10.35□□□□□ -0.75
ACTN4-205ENST00000477174 PEF1Q9UBV8 284 aaKnown RBP10.35□□□□□ -0.75
ACTN4-205ENST00000477174 PRKDCP78527 4128 aaKnown RBP10.35□□□□□ -0.75
ACTN4-205ENST00000477174 TGP01266 2768 aa10.34□□□□□ -0.75
ACTN4-205ENST00000477174 ANKRD20A5PA0PJZ0 165 aa10.34□□□□□ -0.75
ACTN4-205ENST00000477174 CGB1A6NKQ9 187 aa10.34□□□□□ -0.75
ACTN4-205ENST00000477174 RBMXL2O75526 392 aaKnown RBP10.34□□□□□ -0.75
ACTN4-205ENST00000477174 B3GALNT1O75752 331 aa10.34□□□□□ -0.75
ACTN4-205ENST00000477174 PRH1P02810 166 aa10.34□□□□□ -0.75
ACTN4-205ENST00000477174 AREGP15514 252 aa10.34□□□□□ -0.75
ACTN4-205ENST00000477174 CTRB1P17538 263 aa10.34□□□□□ -0.75
ACTN4-205ENST00000477174 PI3P19957 117 aa10.34□□□□□ -0.75
ACTN4-205ENST00000477174 G6PCP35575 357 aa10.34□□□□□ -0.75
ACTN4-205ENST00000477174 SLURP1P55000 103 aa10.34□□□□□ -0.75
ACTN4-205ENST00000477174 ZNF45Q02386 682 aa10.34□□□□□ -0.75
ACTN4-205ENST00000477174 SURF2Q15527 256 aaPredicted RBP10.34□□□□□ -0.75
ACTN4-205ENST00000477174 CTRB2Q6GPI1 263 aa10.34□□□□□ -0.75
ACTN4-205ENST00000477174 HSD17B13Q7Z5P4 300 aaPredicted RBP10.34□□□□□ -0.75
ACTN4-205ENST00000477174 ZNF429Q86V71 674 aa10.34□□□□□ -0.75
ACTN4-205ENST00000477174 OR1L8Q8NGR8 309 aa10.34□□□□□ -0.75
ACTN4-205ENST00000477174 SEC22AQ96IW7 307 aa10.34□□□□□ -0.75
ACTN4-205ENST00000477174 PRRT1Q99946 306 aa10.34□□□□□ -0.75
ACTN4-205ENST00000477174 THAP7Q9BT49 309 aaPredicted RBP10.34□□□□□ -0.75
ACTN4-205ENST00000477174 QTRT1Q9BXR0 403 aaKnown RBP10.34□□□□□ -0.75
ACTN4-205ENST00000477174 NDUFA13Q9P0J0 144 aa10.34□□□□□ -0.75
ACTN4-205ENST00000477174 COPZ2Q9P299 210 aa10.34□□□□□ -0.75
ACTN4-205ENST00000477174 PRNDQ9UKY0 176 aa10.34□□□□□ -0.75
ACTN4-205ENST00000477174 TEX50A0A1B0GTY4 177 aa10.33□□□□□ -0.76
ACTN4-205ENST00000477174 ANKRD34BA5PLL1 514 aa10.33□□□□□ -0.76
ACTN4-205ENST00000477174 H0Y980 276 aa10.33□□□□□ -0.76
ACTN4-205ENST00000477174 CTSDP07339 412 aaPredicted RBP10.33□□□□□ -0.76
ACTN4-205ENST00000477174 TRAPPC2P0DI81 140 aa10.33□□□□□ -0.76
ACTN4-205ENST00000477174 TRAPPC2BP0DI82 140 aa10.33□□□□□ -0.76
ACTN4-205ENST00000477174 DEFA4P12838 97 aa10.33□□□□□ -0.76
ACTN4-205ENST00000477174 MYOD1P15172 320 aa10.33□□□□□ -0.76
ACTN4-205ENST00000477174 HIST1H1BP16401 226 aaKnown RBP10.33□□□□□ -0.76
ACTN4-205ENST00000477174 KLF5Q13887 457 aaPredicted RBP10.33□□□□□ -0.76
ACTN4-205ENST00000477174 CCDC71LQ8N9Z2 235 aa10.33□□□□□ -0.76
ACTN4-205ENST00000477174 OR4C16Q8NGL9 310 aa10.33□□□□□ -0.76
ACTN4-205ENST00000477174 OR13C8Q8NGS7 320 aa10.33□□□□□ -0.76
ACTN4-205ENST00000477174 OR5B3Q8NH48 314 aa10.33□□□□□ -0.76
ACTN4-205ENST00000477174 MARCH1Q8TCQ1 289 aa10.33□□□□□ -0.76
ACTN4-205ENST00000477174 FANCD2OSQ96PS1 177 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms