RNA–Protein interactions for RNA: ENST00000467114.2

PRPF40A-205, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-205ENST00000467114 MRPS24Q96EL2 167 aaKnown RBP1.72□□□□□ -2.13
PRPF40A-205ENST00000467114 CISHQ9NSE2 258 aa1.72□□□□□ -2.13
PRPF40A-205ENST00000467114 MRPL27Q9P0M9 148 aaKnown RBP1.72□□□□□ -2.13
PRPF40A-205ENST00000467114 PRELID3BQ9Y3B1 194 aa1.72□□□□□ -2.13
PRPF40A-205ENST00000467114 A0A0J9YW62 118 aa1.71□□□□□ -2.14
PRPF40A-205ENST00000467114 A0A0J9YY10 115 aa1.71□□□□□ -2.14
PRPF40A-205ENST00000467114 A0A1B0GX78 115 aa1.71□□□□□ -2.14
PRPF40A-205ENST00000467114 OR4C46A6NHA9 309 aa1.71□□□□□ -2.14
PRPF40A-205ENST00000467114 J3QRE1 110 aa1.71□□□□□ -2.14
PRPF40A-205ENST00000467114 FAAHO00519 579 aa1.71□□□□□ -2.14
PRPF40A-205ENST00000467114 LEPROTO15243 131 aa1.71□□□□□ -2.14
PRPF40A-205ENST00000467114 FADS1O60427 444 aa1.71□□□□□ -2.14
PRPF40A-205ENST00000467114 CNIH1O95406 144 aa1.71□□□□□ -2.14
PRPF40A-205ENST00000467114 TFPTP0C1Z6 253 aa1.71□□□□□ -2.14
PRPF40A-205ENST00000467114 RPL5P46777 297 aaKnown RBP1.71□□□□□ -2.14
PRPF40A-205ENST00000467114 SNRPD2P62316 118 aaKnown RBP1.71□□□□□ -2.14
PRPF40A-205ENST00000467114 CDK10Q15131 360 aa1.71□□□□□ -2.14
PRPF40A-205ENST00000467114 LPCAT3Q6P1A2 487 aa1.71□□□□□ -2.14
PRPF40A-205ENST00000467114 SLC35E3Q7Z769 313 aa1.71□□□□□ -2.14
PRPF40A-205ENST00000467114 ANKRD29Q8N6D5 301 aa1.71□□□□□ -2.14
PRPF40A-205ENST00000467114 OR5J2Q8NH18 312 aa1.71□□□□□ -2.14
PRPF40A-205ENST00000467114 CDC26Q8NHZ8 85 aa1.71□□□□□ -2.14
PRPF40A-205ENST00000467114 ACOT12Q8WYK0 555 aa1.71□□□□□ -2.14
PRPF40A-205ENST00000467114 BORCS7Q96B45 105 aa1.71□□□□□ -2.14
PRPF40A-205ENST00000467114 ERMAPQ96PL5 475 aaPredicted RBP1.71□□□□□ -2.14
PRPF40A-205ENST00000467114 IMMP2LQ96T52 175 aa1.71□□□□□ -2.14
PRPF40A-205ENST00000467114 PAIP2Q9BPZ3 127 aaKnown RBP1.71□□□□□ -2.14
PRPF40A-205ENST00000467114 TRIM4Q9C037 500 aa1.71□□□□□ -2.14
PRPF40A-205ENST00000467114 WDR61Q9GZS3 305 aaKnown RBP1.71□□□□□ -2.14
PRPF40A-205ENST00000467114 DCSTAMPQ9H295 470 aa1.71□□□□□ -2.14
PRPF40A-205ENST00000467114 XAGE1AQ9HD64 81 aa1.71□□□□□ -2.14
PRPF40A-205ENST00000467114 PRTFDC1Q9NRG1 225 aa1.71□□□□□ -2.14
PRPF40A-205ENST00000467114 NDUFB11Q9NX14 153 aa1.71□□□□□ -2.14
PRPF40A-205ENST00000467114 DOK5Q9P104 306 aa1.71□□□□□ -2.14
PRPF40A-205ENST00000467114 ARL2BPQ9Y2Y0 163 aa1.71□□□□□ -2.14
PRPF40A-205ENST00000467114 RBM7Q9Y580 266 aaKnown RBP1.71□□□□□ -2.14
PRPF40A-205ENST00000467114 WRNQ14191 1432 aaPredicted RBP eCLIP1.71□□□□□ -2.14
PRPF40A-205ENST00000467114 TRGV4A0A0C4DH28 118 aa1.7□□□□□ -2.14
PRPF40A-205ENST00000467114 KLRC4O43908 158 aa1.7□□□□□ -2.14
PRPF40A-205ENST00000467114 CREBL2O60519 120 aaPredicted RBP1.7□□□□□ -2.14
PRPF40A-205ENST00000467114 HINT1P49773 126 aaPredicted RBP1.7□□□□□ -2.14
PRPF40A-205ENST00000467114 DEFA1P59665 94 aa1.7□□□□□ -2.14
PRPF40A-205ENST00000467114 TMEM97Q5BJF2 176 aa1.7□□□□□ -2.14
PRPF40A-205ENST00000467114 PABPC1L2AQ5JQF8 200 aa1.7□□□□□ -2.14
PRPF40A-205ENST00000467114 ZNF705AQ6ZN79 300 aaPredicted RBP1.7□□□□□ -2.14
PRPF40A-205ENST00000467114 Q6ZS49 121 aa1.7□□□□□ -2.14
PRPF40A-205ENST00000467114 ZNF283Q8N7M2 679 aa1.7□□□□□ -2.14
PRPF40A-205ENST00000467114 OR4X2Q8NGF9 303 aa1.7□□□□□ -2.14
PRPF40A-205ENST00000467114 OR51T1Q8NGJ9 327 aa1.7□□□□□ -2.14
PRPF40A-205ENST00000467114 DNAJC30Q96LL9 226 aa1.7□□□□□ -2.14
PRPF40A-205ENST00000467114 CMSS1Q9BQ75 279 aaKnown RBP1.7□□□□□ -2.14
PRPF40A-205ENST00000467114 Q9BRP9 147 aa1.7□□□□□ -2.14
PRPF40A-205ENST00000467114 CCDC94Q9BW85 323 aaPredicted RBP1.7□□□□□ -2.14
PRPF40A-205ENST00000467114 COMMD5Q9GZQ3 224 aa1.7□□□□□ -2.14
PRPF40A-205ENST00000467114 EFCAB1Q9HAE3 211 aa1.7□□□□□ -2.14
PRPF40A-205ENST00000467114 HHLA3Q9XRX5 114 aa1.7□□□□□ -2.14
PRPF40A-205ENST00000467114 FUT9Q9Y231 359 aa1.7□□□□□ -2.14
PRPF40A-205ENST00000467114 MTUS2Q5JR59 1369 aa1.7□□□□□ -2.14
PRPF40A-205ENST00000467114 TRAV41A0A0B4J266 112 aa1.69□□□□□ -2.14
PRPF40A-205ENST00000467114 FAM236DA0A1B0GTK5 79 aa1.69□□□□□ -2.14
PRPF40A-205ENST00000467114 GGT3PA6NGU5 568 aa1.69□□□□□ -2.14
PRPF40A-205ENST00000467114 H3BT86 120 aa1.69□□□□□ -2.14
PRPF40A-205ENST00000467114 NOS1APO75052 506 aaPredicted RBP1.69□□□□□ -2.14
PRPF40A-205ENST00000467114 HAND1O96004 215 aa1.69□□□□□ -2.14
PRPF40A-205ENST00000467114 SERPINA1P01009 418 aa1.69□□□□□ -2.14
PRPF40A-205ENST00000467114 PRM2P04554 102 aa1.69□□□□□ -2.14
PRPF40A-205ENST00000467114 SERPINA7P05543 415 aa1.69□□□□□ -2.14
PRPF40A-205ENST00000467114 FAM236CP0DP71 79 aa1.69□□□□□ -2.14
PRPF40A-205ENST00000467114 CCL5P13501 91 aa1.69□□□□□ -2.14
PRPF40A-205ENST00000467114 CSRP1P21291 193 aaKnown RBP1.69□□□□□ -2.14
PRPF40A-205ENST00000467114 HLA-DMBP28068 263 aa1.69□□□□□ -2.14
PRPF40A-205ENST00000467114 CAPZBP47756 277 aa1.69□□□□□ -2.14
PRPF40A-205ENST00000467114 RPS20P60866 119 aaKnown RBP1.69□□□□□ -2.14
PRPF40A-205ENST00000467114 HIST1H3AP68431 136 aa1.69□□□□□ -2.14
PRPF40A-205ENST00000467114 HBA1P69905 142 aa1.69□□□□□ -2.14
PRPF40A-205ENST00000467114 H3F3AP84243 136 aa1.69□□□□□ -2.14
PRPF40A-205ENST00000467114 TMED2Q15363 201 aa1.69□□□□□ -2.14
PRPF40A-205ENST00000467114 SS18Q15532 418 aa1.69□□□□□ -2.14
PRPF40A-205ENST00000467114 KLF6Q99612 283 aaPredicted RBP1.69□□□□□ -2.14
PRPF40A-205ENST00000467114 SIGMAR1Q99720 223 aa1.69□□□□□ -2.14
PRPF40A-205ENST00000467114 TLNRD1Q9H1K6 362 aa1.69□□□□□ -2.14
PRPF40A-205ENST00000467114 IL36BQ9NZH7 164 aa1.69□□□□□ -2.14
PRPF40A-205ENST00000467114 NAT8Q9UHE5 227 aa1.69□□□□□ -2.14
PRPF40A-205ENST00000467114 TIMM9Q9Y5J7 89 aa1.69□□□□□ -2.14
PRPF40A-205ENST00000467114 SIPA1L1O43166 1804 aa1.68□□□□□ -2.14
PRPF40A-205ENST00000467114 FBN3Q75N90 2809 aa1.68□□□□□ -2.14
PRPF40A-205ENST00000467114 MYO9BQ13459 2157 aa1.68□□□□□ -2.14
PRPF40A-205ENST00000467114 SLIT2O94813 1529 aa1.68□□□□□ -2.14
PRPF40A-205ENST00000467114 TRAV26-2A0A0B4J265 109 aa1.68□□□□□ -2.14
PRPF40A-205ENST00000467114 RFPL4AA6NLU0 287 aa1.68□□□□□ -2.14
PRPF40A-205ENST00000467114 ZNF878C9JN71 531 aa1.68□□□□□ -2.14
PRPF40A-205ENST00000467114 RFPL4AL1F8VTS6 287 aa1.68□□□□□ -2.14
PRPF40A-205ENST00000467114 CRYZL1O95825 349 aa1.68□□□□□ -2.14
PRPF40A-205ENST00000467114 MSNP26038 577 aaKnown RBP1.68□□□□□ -2.14
PRPF40A-205ENST00000467114 PSMB8P28062 276 aa1.68□□□□□ -2.14
PRPF40A-205ENST00000467114 ALDH3A1P30838 453 aa1.68□□□□□ -2.14
PRPF40A-205ENST00000467114 RPL28P46779 137 aaKnown RBP1.68□□□□□ -2.14
PRPF40A-205ENST00000467114 TPI1P60174 286 aa1.68□□□□□ -2.14
PRPF40A-205ENST00000467114 RAB14P61106 215 aa1.68□□□□□ -2.14
PRPF40A-205ENST00000467114 CCL20P78556 96 aa1.68□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms