RNA–Protein interactions for RNA: ENST00000428082.6

TVP23C-203, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TVP23C, Length 1,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-203ENST00000428082 CTAG1AP78358 180 aa12.9□□□□□ -0.34
TVP23C-203ENST00000428082 HOXA4Q00056 320 aaPredicted RBP12.9□□□□□ -0.34
TVP23C-203ENST00000428082 PRAMEF5Q5TYX0 476 aa12.9□□□□□ -0.34
TVP23C-203ENST00000428082 ZNF343Q6P1L6 599 aa12.9□□□□□ -0.34
TVP23C-203ENST00000428082 MOGAT3Q86VF5 341 aa12.9□□□□□ -0.34
TVP23C-203ENST00000428082 GCSAMQ8N6F7 178 aa12.9□□□□□ -0.34
TVP23C-203ENST00000428082 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.9□□□□□ -0.34
TVP23C-203ENST00000428082 ZDHHC16Q969W1 377 aa12.9□□□□□ -0.34
TVP23C-203ENST00000428082 S1PR3Q99500 378 aa12.9□□□□□ -0.34
TVP23C-203ENST00000428082 AKAP6Q13023 2319 aa12.9□□□□□ -0.34
TVP23C-203ENST00000428082 DYSFO75923 2080 aa12.9□□□□□ -0.34
TVP23C-203ENST00000428082 FCGR3BO75015 233 aa12.9□□□□□ -0.35
TVP23C-203ENST00000428082 EGR1P18146 543 aa12.9□□□□□ -0.35
TVP23C-203ENST00000428082 CD81P60033 236 aa12.9□□□□□ -0.35
TVP23C-203ENST00000428082 TMEM30BQ3MIR4 351 aa12.9□□□□□ -0.35
TVP23C-203ENST00000428082 QTRT1Q9BXR0 403 aaKnown RBP12.9□□□□□ -0.35
TVP23C-203ENST00000428082 SLC25A22Q9H936 323 aa12.9□□□□□ -0.35
TVP23C-203ENST00000428082 GCM1Q9NP62 436 aa12.9□□□□□ -0.35
TVP23C-203ENST00000428082 KCNIP2Q9NS61 270 aa12.9□□□□□ -0.35
TVP23C-203ENST00000428082 WDR83OSQ9Y284 106 aa12.9□□□□□ -0.35
TVP23C-203ENST00000428082 SEC14L6B5MCN3 397 aa12.89□□□□□ -0.35
TVP23C-203ENST00000428082 M0R1X1 148 aa12.89□□□□□ -0.35
TVP23C-203ENST00000428082 CLN5O75503 358 aa12.89□□□□□ -0.35
TVP23C-203ENST00000428082 S100PP25815 95 aa12.89□□□□□ -0.35
TVP23C-203ENST00000428082 CD1BP29016 333 aa12.89□□□□□ -0.35
TVP23C-203ENST00000428082 S100A2P29034 98 aa12.89□□□□□ -0.35
TVP23C-203ENST00000428082 GATA4P43694 442 aa12.89□□□□□ -0.35
TVP23C-203ENST00000428082 PPOXP50336 477 aa12.89□□□□□ -0.35
TVP23C-203ENST00000428082 FAM53AQ6NSI3 398 aaPredicted RBP12.89□□□□□ -0.35
TVP23C-203ENST00000428082 TGIF2LYQ8IUE0 185 aa12.89□□□□□ -0.35
TVP23C-203ENST00000428082 RAB1CQ92928 201 aa12.89□□□□□ -0.35
TVP23C-203ENST00000428082 SAP30LQ9HAJ7 183 aa12.89□□□□□ -0.35
TVP23C-203ENST00000428082 C15orf62A8K5M9 175 aa12.88□□□□□ -0.35
TVP23C-203ENST00000428082 LHBP01229 141 aa12.88□□□□□ -0.35
TVP23C-203ENST00000428082 TFF1P04155 84 aa12.88□□□□□ -0.35
TVP23C-203ENST00000428082 CDC34P49427 236 aaPredicted RBP12.88□□□□□ -0.35
TVP23C-203ENST00000428082 NDUFA6P56556 154 aa12.88□□□□□ -0.35
TVP23C-203ENST00000428082 SLC16A13Q7RTY0 426 aa12.88□□□□□ -0.35
TVP23C-203ENST00000428082 OR4S2Q8NH73 311 aa12.88□□□□□ -0.35
TVP23C-203ENST00000428082 RAB24Q969Q5 203 aa12.88□□□□□ -0.35
TVP23C-203ENST00000428082 ADTRPQ96IZ2 230 aa12.88□□□□□ -0.35
TVP23C-203ENST00000428082 NIT2Q9NQR4 276 aa12.88□□□□□ -0.35
TVP23C-203ENST00000428082 CALYQ9NYX4 217 aa12.88□□□□□ -0.35
TVP23C-203ENST00000428082 DOK5Q9P104 306 aa12.88□□□□□ -0.35
TVP23C-203ENST00000428082 FASNP49327 2511 aaKnown RBP12.88□□□□□ -0.35
TVP23C-203ENST00000428082 OR9G9P0C7N8 305 aa12.88□□□□□ -0.35
TVP23C-203ENST00000428082 TNFRSF1AP19438 455 aa12.88□□□□□ -0.35
TVP23C-203ENST00000428082 LTC4SQ16873 150 aa12.88□□□□□ -0.35
TVP23C-203ENST00000428082 BSXQ3C1V8 233 aa12.88□□□□□ -0.35
TVP23C-203ENST00000428082 ANAPC16Q96DE5 110 aa12.88□□□□□ -0.35
TVP23C-203ENST00000428082 NEIL1Q96FI4 390 aaPredicted RBP12.88□□□□□ -0.35
TVP23C-203ENST00000428082 TXNDC17Q9BRA2 123 aa12.88□□□□□ -0.35
TVP23C-203ENST00000428082 DCTN5Q9BTE1 182 aa12.88□□□□□ -0.35
TVP23C-203ENST00000428082 OR51M1Q9H341 326 aa12.88□□□□□ -0.35
TVP23C-203ENST00000428082 VENTXO95231 258 aa12.87□□□□□ -0.35
TVP23C-203ENST00000428082 IFNA10P01566 189 aa12.87□□□□□ -0.35
TVP23C-203ENST00000428082 LOXL3P58215 753 aa12.87□□□□□ -0.35
TVP23C-203ENST00000428082 ADIRFQ15847 76 aa12.87□□□□□ -0.35
TVP23C-203ENST00000428082 OR4F5Q8NH21 305 aa12.87□□□□□ -0.35
TVP23C-203ENST00000428082 OR5B12Q96R08 314 aa12.87□□□□□ -0.35
TVP23C-203ENST00000428082 OR4F4Q96R69 305 aa12.87□□□□□ -0.35
TVP23C-203ENST00000428082 HEYLQ9NQ87 328 aaPredicted RBP12.87□□□□□ -0.35
TVP23C-203ENST00000428082 KIAA2026Q5HYC2 2103 aa12.87□□□□□ -0.35
TVP23C-203ENST00000428082 PPP1R2P9O14990 202 aa12.86□□□□□ -0.35
TVP23C-203ENST00000428082 PDE6DO43924 150 aa12.86□□□□□ -0.35
TVP23C-203ENST00000428082 FABP1P07148 127 aa12.86□□□□□ -0.35
TVP23C-203ENST00000428082 CDKN1AP38936 164 aa12.86□□□□□ -0.35
TVP23C-203ENST00000428082 OPRK1P41145 380 aa12.86□□□□□ -0.35
TVP23C-203ENST00000428082 THBS3P49746 956 aa12.86□□□□□ -0.35
TVP23C-203ENST00000428082 EDDM3BP56851 147 aa12.86□□□□□ -0.35
TVP23C-203ENST00000428082 HIST2H2BCQ6DN03 193 aa12.86□□□□□ -0.35
TVP23C-203ENST00000428082 FAM234AQ9H0X4 552 aa12.86□□□□□ -0.35
TVP23C-203ENST00000428082 IFI27L2Q9H2X8 130 aa12.86□□□□□ -0.35
TVP23C-203ENST00000428082 DCAF16Q9NXF7 216 aa12.86□□□□□ -0.35
TVP23C-203ENST00000428082 GAR1Q9NY12 217 aaKnown RBP12.86□□□□□ -0.35
TVP23C-203ENST00000428082 RNF7Q9UBF6 113 aa12.86□□□□□ -0.35
TVP23C-203ENST00000428082 TANC2Q9HCD6 1990 aa12.86□□□□□ -0.35
TVP23C-203ENST00000428082 CELSR2Q9HCU4 2923 aa12.86□□□□□ -0.35
TVP23C-203ENST00000428082 CENPEQ02224 2701 aa12.86□□□□□ -0.35
TVP23C-203ENST00000428082 TACC2O95359 2948 aa12.86□□□□□ -0.35
TVP23C-203ENST00000428082 TRGV10A0A0A0MS01 117 aa12.86□□□□□ -0.35
TVP23C-203ENST00000428082 A0A1W2PPV4 95 aa12.86□□□□□ -0.35
TVP23C-203ENST00000428082 HIST1H2BKO60814 126 aa12.86□□□□□ -0.35
TVP23C-203ENST00000428082 TRGC2P03986 189 aa12.86□□□□□ -0.35
TVP23C-203ENST00000428082 HIST1H2BJP06899 126 aa12.86□□□□□ -0.35
TVP23C-203ENST00000428082 HIST1H2BOP23527 126 aa12.86□□□□□ -0.35
TVP23C-203ENST00000428082 HIST1H2BBP33778 126 aa12.86□□□□□ -0.35
TVP23C-203ENST00000428082 HIST1H2BDP58876 126 aa12.86□□□□□ -0.35
TVP23C-203ENST00000428082 HIST1H2BCP62807 126 aa12.86□□□□□ -0.35
TVP23C-203ENST00000428082 HIST2H2BEQ16778 126 aa12.86□□□□□ -0.35
TVP23C-203ENST00000428082 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.86□□□□□ -0.35
TVP23C-203ENST00000428082 HIST1H2BHQ93079 126 aa12.86□□□□□ -0.35
TVP23C-203ENST00000428082 HIST1H2BNQ99877 126 aa12.86□□□□□ -0.35
TVP23C-203ENST00000428082 HIST1H2BMQ99879 126 aa12.86□□□□□ -0.35
TVP23C-203ENST00000428082 PARLQ9H300 379 aa12.86□□□□□ -0.35
TVP23C-203ENST00000428082 GFOD1Q9NXC2 390 aa12.86□□□□□ -0.35
TVP23C-203ENST00000428082 USF3Q68DE3 2245 aa12.86□□□□□ -0.35
TVP23C-203ENST00000428082 PROP1O75360 226 aa12.85□□□□□ -0.35
TVP23C-203ENST00000428082 CGB3P0DN86 165 aa12.85□□□□□ -0.35
TVP23C-203ENST00000428082 CGB7P0DN87 165 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms